Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168944222-19946-149728672575.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig288 Length=567
Score E Sequences producing significant alignments: (Bits) Value gi|108709691|gb|ABF97486.1| expressed protein [Oryza sativa (jap 34.3 0.31 gi|74027156|gb|AAZ94706.1| hypothetical protein [Cucumis sativus 33.5 0.53 gi|115484999|ref|NP_001067643.1| Os11g0258900 [Oryza sativa (... 33.1 0.69 gi|92876856|gb|ABE84147.1| Blue (type 1) copper domain [Medicago 33.1 0.69 gi|22086512|gb|AAM90664.1|AF401281_1 putative pyruvate kinase [D 33.1 0.69 gi|77555764|gb|ABA98560.1| transposon protein, putative, CACT... 33.1 0.69 gi|110742078|dbj|BAE98970.1| hypothetical protein [Arabidopsis t 32.7 0.91 gi|79356279|ref|NP_174315.2| unknown protein [Arabidopsis thalia 32.7 0.91 gi|115482208|ref|NP_001064697.1| Os10g0442400 [Oryza sativa (... 32.7 0.91 gi|68164862|ref|YP_247658.1| hypothetical protein CsCp113 [Cu... 32.3 1.2 gi|47847703|dbj|BAD21483.1| zinc finger (C2H2 type)-like [Ory... 32.3 1.2 gi|15230141|ref|NP_189109.1| TMKL1 (TRANSMEMBRANE KINASE-LIKE... 32.3 1.2 gi|40538971|gb|AAR87228.1| hypothetical protein [Oryza sativa (j 32.0 1.5 gi|30696750|ref|NP_176463.2| enzyme inhibitor/ pectinesterase... 32.0 1.5 gi|115478378|ref|NP_001062784.1| Os09g0287300 [Oryza sativa (... 31.6 2.0 gi|50726435|dbj|BAD34044.1| hypothetical protein [Oryza sativa ( 31.6 2.0 gi|38636899|dbj|BAD03163.1| hypothetical protein [Oryza sativa ( 31.6 2.0 gi|115464033|ref|NP_001055616.1| Os05g0429100 [Oryza sativa (... 31.2 2.6 gi|49147192|ref|YP_025785.1| cytochrome c oxidase subunit 3 [... 31.2 2.6 gi|1297070|emb|CAA96513.1| convicilin precursor [Vicia narbonens 31.2 2.6 gi|1276971|gb|AAB01097.1| glycine-rich protein 31.2 2.6 gi|40253337|dbj|BAD05270.1| phospholipid-transporting ATPase ... 31.2 2.6 gi|38423970|dbj|BAD01698.1| hypothetical protein [Oryza sativa ( 31.2 2.6 gi|21594204|gb|AAM65980.1| unknown [Arabidopsis thaliana] 30.8 3.4 gi|18402667|ref|NP_565724.1| unknown protein [Arabidopsis tha... 30.8 3.4 gi|92888433|gb|ABE89409.1| hypothetical protein MtrDRAFT_AC14... 30.4 4.5 gi|15217472|ref|NP_174594.1| AT-GTL1; transcription factor [Arab 30.4 4.5 gi|9665169|gb|AAF97353.1|AC021045_10 Putative GTL1 [Arabidopsis 30.4 4.5 gi|6103625|gb|AAF03693.1| unknown [Picea rubens] 30.4 4.5 gi|14549150|gb|AAK08984.1| glycine-rich protein LeGRP1 [Lycopers 30.4 4.5 gi|12322569|gb|AAG51283.1|AC027035_6 trihelix DNA-binding protei 30.4 4.5 gi|115481146|ref|NP_001064166.1| Os10g0148700 [Oryza sativa (... 30.4 4.5 gi|55297137|dbj|BAD68780.1| hypothetical protein [Oryza sativa ( 30.4 4.5 gi|49388820|dbj|BAD26010.1| subtilase-like protein [Oryza sativa 30.4 4.5 gi|117655|sp|P13915|CVCA_PEA Convicilin precursor >gi|313670|... 30.4 4.5 gi|2664204|emb|CAA05998.1| GTL1 [Arabidopsis thaliana] 30.4 4.5 gi|2664200|emb|CAA05996.1| GTL2 [Arabidopsis thaliana] 30.4 4.5 gi|2664198|emb|CAA05995.1| GTL1 [Arabidopsis thaliana] 30.4 4.5 gi|56784858|dbj|BAD82098.1| hypothetical protein [Oryza sativa ( 30.0 5.9 gi|8493585|gb|AAF75808.1|AC011000_11 Contains similarity to h... 30.0 5.9 gi|78708690|gb|ABB47665.1| retrotransposon protein, putative,... 30.0 5.9 gi|30696783|ref|NP_176485.2| heat shock protein binding / unf... 30.0 5.9 gi|115446643|ref|NP_001047101.1| Os02g0551600 [Oryza sativa (... 30.0 5.9 gi|14018072|gb|AAK52135.1|AC084380_8 transposon protein, puta... 29.6 7.7 gi|54290597|dbj|BAD62006.1| adsorption protein-like [Oryza sa... 29.6 7.7 gi|24060150|dbj|BAC21595.1| hypothetical protein [Oryza sativa ( 29.6 7.7 gi|1345946|sp|Q07510|FABH_SPIOL 3-oxoacyl-[acyl-carrier-prote... 29.6 7.7 gi|15232289|ref|NP_191587.1| UCC3 (UCLACYANIN 3); copper ion ... 29.6 7.7
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 387 Number of extensions: 5 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 567 Length of database: 101054579 Length adjustment: 107 Effective length of query: 460 Effective length of database: 70736236 Effective search space: 5800371352 Effective search space used: 5800371352 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 64 (29.3 bits)