Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168929812-24553-165937977072.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig29 Length=528
Score E Sequences producing significant alignments: (Bits) Value gi|15234564|ref|NP_195409.1| unknown protein [Arabidopsis tha... 73.2 5e-13 gi|92873938|gb|ABE82274.1| CBS [Medicago truncatula] 62.0 1e-11 gi|2911050|emb|CAA17560.1| putative protein [Arabidopsis thal... 58.5 1e-11 gi|18418376|ref|NP_567952.1| unknown protein [Arabidopsis tha... 58.5 1e-11 gi|115477978|ref|NP_001062584.1| Os09g0115500 [Oryza sativa (... 58.2 5e-10 gi|115475836|ref|NP_001061514.1| Os08g0313200 [Oryza sativa (... 61.6 2e-09 gi|34015153|gb|AAQ56349.1| putative CBS domain containing pro... 60.8 3e-09 gi|34394308|dbj|BAC84790.1| unknown protein [Oryza sativa (japon 26.9 0.33 gi|115471631|ref|NP_001059414.1| Os07g0297300 [Oryza sativa (... 26.9 0.33 gi|108708000|gb|ABF95795.1| expressed protein [Oryza sativa (jap 33.5 0.46 gi|108708001|gb|ABF95796.1| expressed protein [Oryza sativa (jap 33.5 0.46 gi|115452855|ref|NP_001050028.1| Os03g0334100 [Oryza sativa (... 33.5 0.46 gi|18395921|ref|NP_566147.1| unknown protein [Arabidopsis tha... 32.0 1.3 gi|31432441|gb|AAP54071.1| expressed protein [Oryza sativa (japo 31.2 2.3 gi|115459688|ref|NP_001053444.1| Os04g0541100 [Oryza sativa (... 30.8 3.0 gi|38344985|emb|CAE02791.2| OSJNBa0011L07.15 [Oryza sativa (j... 30.8 3.0 gi|20249|emb|CAA48328.1| gt-2 [Oryza sativa (indica cultivar-gro 30.8 3.0 gi|115489020|ref|NP_001066997.1| Os12g0555400 [Oryza sativa (... 30.4 3.9 gi|15225832|ref|NP_180268.1| CYP705A8; heme binding / iron io... 30.4 3.9 gi|15225834|ref|NP_180269.1| CYP705A9; heme binding / iron io... 30.4 3.9 gi|27260956|dbj|BAC45074.1| hypothetical protein [Oryza sativa ( 30.4 3.9 gi|117955998|gb|ABK58587.1| ATPase subunit 6 [Brassica juncea va 30.0 5.0 gi|56784192|dbj|BAD81577.1| hypothetical protein [Oryza sativ... 30.0 5.0 gi|18410039|ref|NP_565039.1| unknown protein [Arabidopsis tha... 30.0 5.0 gi|117171197|gb|ABC59104.2| cytochrome P450 monooxygenase CYP93B 29.6 6.6 gi|4416217|gb|AAD20264.1| ATP synthase subunit 6 [Solanum tubero 29.6 6.6 gi|4416214|gb|AAD20262.1| ATP synthase subunit 6 [Solanum tubero 29.6 6.6 gi|17027269|gb|AAL34123.1|AC090713_10 hypothetical protein [O... 29.6 6.6 gi|77551893|gb|ABA94690.1| lipin, N-terminal conserved region... 29.6 6.6 gi|92886420|gb|ABE88310.1| Retrotransposon gag protein; Retro... 29.3 8.6 gi|15451546|gb|AAK98670.1|AC021893_4 Hypothetical protein [Or... 29.3 8.6 gi|19881712|gb|AAM01113.1|AC098682_17 Unknown protein [Oryza ... 29.3 8.6 gi|115468580|ref|NP_001057889.1| Os06g0565200 [Oryza sativa (... 29.3 8.6 gi|115470783|ref|NP_001058990.1| Os07g0170200 [Oryza sativa (... 29.3 8.6 gi|29467576|dbj|BAC66745.1| hypothetical protein [Oryza sativa ( 29.3 8.6 gi|585118|sp|Q07204|F16P1_BRANA Fructose-1,6-bisphosphatase, ... 29.3 8.6
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 345 Number of extensions: 7 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 528 Length of database: 101054579 Length adjustment: 106 Effective length of query: 422 Effective length of database: 71019585 Effective search space: 4971370950 Effective search space used: 4971370950 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 64 (29.3 bits)