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BLASTX 2.2.15 [Oct-15-2006] 
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman 
(1997), "Gapped BLAST and PSI-BLAST: a new generation of 
protein database search programs", Nucleic Acids Res. 25:3389-3402.

RID: 1168944343-26901-100694417775.BLASTQ1


Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
           4,458,890 sequences; 1,532,996,420 total letters

 
If you have any problems or questions with the results of this search 
please refer to the BLAST FAQs
Taxonomy reports

Query=  Contig295
Length=236

Distribution of 8 Blast Hits on the Query Sequence


                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|11072010|gb|AAG28889.1|AC008113_5  F12A21.11 [Arabidopsis thal  69.3    4e-12
gi|79374903|ref|NP_176942.2|  unknown protein [Arabidopsis tha...  69.3    4e-12 UniGene infoGene info
gi|15221770|ref|NP_173859.1|  ATP binding / protein binding [A...  69.3    4e-12 UniGene infoGene info
gi|1587206|prf||2206327A  T complex protein                        68.6    6e-12
gi|115468554|ref|NP_001057876.1|  Os06g0562600 [Oryza sativa (...  66.6    2e-11 Gene info
gi|116056503|emb|CAL52792.1|  Chaperonin complex component, TC...  62.0    6e-10
gi|730919|sp|P40412|TCPE1_AVESA  T-complex protein 1 subunit e...  59.7    3e-09
gi|1729864|sp|P54411|TCPE2_AVESA  T-complex protein 1 subunit ...  57.4    1e-08
Alignments

>gi|11072010|gb|AAG28889.1|AC008113_5  F12A21.11 [Arabidopsis thaliana]
Length=142

 Score = 69.3 bits (168),  Expect = 4e-12
 Identities = 32/37 (86%), Positives = 37/37 (100%), Gaps = 0/37 (0%)
 Frame = +3

Query  120  LAFDEFGRPFIIIKEQEQKTRLRGIEAQKANISAGKA  230
            LAFDEFGRPFII++EQ+QKTRL+GI+AQKANISAGKA
Sbjct  3    LAFDEFGRPFIILREQDQKTRLKGIDAQKANISAGKA  39


>gi|79374903|ref|NP_176942.2| UniGene infoGene info unknown protein [Arabidopsis thaliana]
 gi|51970490|dbj|BAD43937.1| UniGene infoGene info putative protein [Arabidopsis thaliana]
Length=120

 Score = 69.3 bits (168),  Expect = 4e-12
 Identities = 32/37 (86%), Positives = 37/37 (100%), Gaps = 0/37 (0%)
 Frame = +3

Query  120  LAFDEFGRPFIIIKEQEQKTRLRGIEAQKANISAGKA  230
            LAFDEFGRPFII++EQ+QKTRL+GI+AQKANISAGKA
Sbjct  3    LAFDEFGRPFIILREQDQKTRLKGIDAQKANISAGKA  39


>gi|15221770|ref|NP_173859.1| UniGene infoGene info ATP binding / protein binding [Arabidopsis thaliana]
 gi|3024697|sp|O04450|TCPE_ARATH Gene info T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon)
 gi|9743353|gb|AAF97977.1|AC000103_27 Gene info F21J9.17 [Arabidopsis thaliana]
 gi|19715605|gb|AAL91625.1| UniGene infoGene info At1g24510/F21J9_150 [Arabidopsis thaliana]
 gi|23463047|gb|AAN33193.1| UniGene infoGene info At1g24510/F21J9_150 [Arabidopsis thaliana]
Length=535

 Score = 69.3 bits (168),  Expect = 4e-12
 Identities = 32/37 (86%), Positives = 37/37 (100%), Gaps = 0/37 (0%)
 Frame = +3

Query  120  LAFDEFGRPFIIIKEQEQKTRLRGIEAQKANISAGKA  230
            LAFDEFGRPFII++EQ+QKTRLRGI+AQKANI+AGKA
Sbjct  3    LAFDEFGRPFIILREQDQKTRLRGIDAQKANIAAGKA  39


>gi|1587206|prf||2206327A  T complex protein
Length=534

 Score = 68.6 bits (166),  Expect = 6e-12
 Identities = 31/37 (83%), Positives = 37/37 (100%), Gaps = 0/37 (0%)
 Frame = +3

Query  120  LAFDEFGRPFIIIKEQEQKTRLRGIEAQKANISAGKA  230
            LAFDE+GRPFII+KEQEQKTRLRG++AQKANI++GKA
Sbjct  3    LAFDEYGRPFIILKEQEQKTRLRGLDAQKANIASGKA  39


>gi|115468554|ref|NP_001057876.1| Gene info Os06g0562600 [Oryza sativa (japonica cultivar-group)]
 gi|53791802|dbj|BAD53747.1| Gene info putative T complex protein [Oryza sativa (japonica cultivar-group)]
 gi|113595916|dbj|BAF19790.1| Gene info Os06g0562600 [Oryza sativa (japonica cultivar-group)]
Length=535

 Score = 66.6 bits (161),  Expect = 2e-11
 Identities = 30/37 (81%), Positives = 37/37 (100%), Gaps = 0/37 (0%)
 Frame = +3

Query  120  LAFDEFGRPFIIIKEQEQKTRLRGIEAQKANISAGKA  230
            LAFDEFGRPFII++EQE+K+RLRG++AQKANI+AGKA
Sbjct  3    LAFDEFGRPFIILREQEKKSRLRGLDAQKANIAAGKA  39


>gi|116056503|emb|CAL52792.1|  Chaperonin complex component, TCP-1 beta subunit (CCT2) (ISS) 
[Ostreococcus tauri]
Length=563

 Score = 62.0 bits (149),  Expect = 6e-10
 Identities = 29/37 (78%), Positives = 34/37 (91%), Gaps = 0/37 (0%)
 Frame = +3

Query  120  LAFDEFGRPFIIIKEQEQKTRLRGIEAQKANISAGKA  230
            LAFDEFGRPFIIIKEQ  KTR++GI+AQKANI+A K+
Sbjct  3    LAFDEFGRPFIIIKEQGNKTRVKGIDAQKANIAAAKS  39


>gi|730919|sp|P40412|TCPE1_AVESA  T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) 
(TCP-K19)
 gi|435173|emb|CAA53396.1|  T complex polypeptide 1 [Avena sativa]
Length=535

 Score = 59.7 bits (143),  Expect = 3e-09
 Identities = 26/37 (70%), Positives = 35/37 (94%), Gaps = 0/37 (0%)
 Frame = +3

Query  120  LAFDEFGRPFIIIKEQEQKTRLRGIEAQKANISAGKA  230
            LAFDE+GRPFII++EQE+K+RL+G++A KANI+A KA
Sbjct  3    LAFDEYGRPFIILREQEKKSRLQGLDAHKANIAAAKA  39


>gi|1729864|sp|P54411|TCPE2_AVESA  T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon) 
(TCP-K36)
 gi|435175|emb|CAA53397.1|  t complex polypeptide 1 [Avena sativa]
Length=535

 Score = 57.4 bits (137),  Expect = 1e-08
 Identities = 25/37 (67%), Positives = 35/37 (94%), Gaps = 0/37 (0%)
 Frame = +3

Query  120  LAFDEFGRPFIIIKEQEQKTRLRGIEAQKANISAGKA  230
            L FDE+ RPFII++EQE+K+RL+G++AQKANI+AGK+
Sbjct  3    LDFDEYWRPFIILREQEKKSRLQGLDAQKANIAAGKS  39







  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 15, 2007  4:53 AM
  Number of letters in database: 101,054,579
  Number of sequences in database:  283,349
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283349
Number of Hits to DB: 126
Number of extensions: 6
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 236
Length of database: 101054579
Length adjustment: 49
Effective length of query: 187
Effective length of database: 87170478
Effective search space: 2527943862
Effective search space used: 2527943862
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 61 (28.1 bits)