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BLASTX 2.2.15 [Oct-15-2006] 
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman 
(1997), "Gapped BLAST and PSI-BLAST: a new generation of 
protein database search programs", Nucleic Acids Res. 25:3389-3402.

RID: 1168928546-28078-107712342950.BLASTQ4


Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
           4,458,890 sequences; 1,532,996,420 total letters

 
If you have any problems or questions with the results of this search 
please refer to the BLAST FAQs
Taxonomy reports

Query=  Contig3
Length=210

Distribution of 1 Blast Hits on the Query Sequence


                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|108796684|ref|YP_636555.1|  cell division protein [Zygnema ...  28.1    9.6   Gene info
Alignments

>gi|108796684|ref|YP_636555.1| Gene info cell division protein [Zygnema circumcarinatum]
 gi|61393668|gb|AAX45810.1| Gene info cell division protein [Zygnema circumcarinatum]
Length=2036

 Score = 28.1 bits (61),  Expect = 9.6
 Identities = 16/33 (48%), Positives = 16/33 (48%), Gaps = 5/33 (15%)
 Frame = +3

Query  108  IRTQSYIFLDCLSHIRVGLPTKQIWNNENPNLY  206
            IRT  Y  LD  S         QIWN  NPNLY
Sbjct  742  IRTALYTSLDISS-----FEINQIWNKLNPNLY  769







  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 15, 2007  4:53 AM
  Number of letters in database: 101,054,579
  Number of sequences in database:  283,349
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283349
Number of Hits to DB: 156
Number of extensions: 1
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 210
Length of database: 101054579
Length adjustment: 42
Effective length of query: 168
Effective length of database: 89153921
Effective search space: 2496309788
Effective search space used: 2496309788
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 61 (28.1 bits)