RID=1168944743-15894-211686045274.BLASTQ1, Contig304

BLASTX 2.2.15 [Oct-15-2006]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168944743-15894-211686045274.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Query=  Contig304
Length=537

Distribution of 12 Blast Hits on the Query Sequence

                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|18413096|ref|NP_567335.1|  unknown protein [Arabidopsis tha...   157    3e-38 
gi|115446793|ref|NP_001047176.1|  Os02g0567000 [Oryza sativa (...  95.5    1e-19 
gi|115475139|ref|NP_001061166.1|  Os08g0190300 [Oryza sativa (...  36.2    0.073 
gi|116059314|emb|CAL55021.1|  Kinesin (KAR3 subfamily) (ISS) [Ost  31.6    1.8  
gi|108708336|gb|ABF96131.1|  retrotransposon protein, putative...  31.2    2.4  
gi|92896488|gb|ABE93218.1|  Zinc finger, RanBP2-type [Medicago tr  31.2    2.4  
gi|38344533|emb|CAD39859.2|  OSJNBa0036B17.9 [Oryza sativa (japon  30.4    4.0   
gi|130267|sp|P20422|PLAS_DAUCA  Plastocyanin                       30.4    4.0  
gi|38568046|emb|CAD40420.3|  OSJNBa0065J03.16 [Oryza sativa (japo  30.0    5.2   
gi|115480037|ref|NP_001063612.1|  Os09g0507100 [Oryza sativa (...  29.6    6.9   
gi|27311771|gb|AAO00851.1|  Unknown protein [Arabidopsis thali...  29.6    6.9   
gi|15238724|ref|NP_197898.1|  ZFP3 (ZINC FINGER PROTEIN 3); nu...  29.3    9.0

Alignments

 

>gi|18413096|ref|NP_567335.1|  unknown protein [Arabidopsis thaliana]
 gi|30680689|ref|NP_849344.1|  unknown protein [Arabidopsis thaliana]
 gi|5262197|emb|CAB45794.1|  hypothetical protein [Arabidopsis thaliana]
 gi|7267464|emb|CAB81160.1|  hypothetical protein [Arabidopsis thaliana]
 gi|21618024|gb|AAM67074.1|  unknown [Arabidopsis thaliana]
 gi|26453240|dbj|BAC43693.1|  unknown protein [Arabidopsis thaliana]
 gi|28416889|gb|AAO42975.1|  At4g08240 [Arabidopsis thaliana]
Length=136

 Score =  157 bits (396),  Expect = 3e-38
 Identities = 83/136 (61%), Positives = 101/136 (74%), Gaps = 5/136 (3%)
 Frame = +1

Query  7    RGVGGPLLTIGDLLSDVGDESGAxpdhlhhhdttlpSPSSSIFDANDVPQSLDLTKLFQE  186
            RGVGGPLL+IGDLL+D+GDE+G         +   P  SS  +  + +   LDLT+LFQE
Sbjct  2    RGVGGPLLSIGDLLADLGDETG-----HSPQNHPNPEVSSKSYSDDTISGPLDLTRLFQE  56

Query  187  NYEKLNEALSGSDHSWTALTLKLCTALETANKLVQSTDTNIRLXSEKDAELEKIVKRGDS  366
            NY+KLN+A +GSDHSWT+LTL+LCT+LETANKLV +T TN RL SEK  ELEKIVKRGDS
Sbjct  57   NYDKLNDAFAGSDHSWTSLTLELCTSLETANKLVHATTTNARLLSEKVEELEKIVKRGDS  116

Query  367  AVTADRAISIALNQKG  414
            AV A R +   +NQKG
Sbjct  117  AVAAARTVHATVNQKG  132


>gi|115446793|ref|NP_001047176.1|  Os02g0567000 [Oryza sativa (japonica cultivar-group)]
 gi|46806683|dbj|BAD17753.1|  unknown protein [Oryza sativa (japonica cultivar-group)]
 gi|113536707|dbj|BAF09090.1|  Os02g0567000 [Oryza sativa (japonica cultivar-group)]
Length=146

 Score = 95.5 bits (236),  Expect = 1e-19
 Identities = 58/124 (46%), Positives = 77/124 (62%), Gaps = 3/124 (2%)
 Frame = +1

Query  7    RGVGGPLLTIGDLLSDVGDESGAxpdhlhhhdttlpSPSSSIFDANDVPQSLDLTKLFQE  186
            RGVGGPLLTIGDLLSD+  + GA          +  SPSS+   A +   S +L +LF E
Sbjct  2    RGVGGPLLTIGDLLSDLAVDGGADLAGGEVSVPS--SPSSAGQQAEEADPS-ELNRLFGE  58

Query  187  NYEKLNEALSGSDHSWTALTLKLCTALETANKLVQSTDTNIRLXSEKDAELEKIVKRGDS  366
            +Y+ L +AL  +D SW +L LKLCTAL+TA+KLV     +     +K   LE+++ RGD 
Sbjct  59   HYDNLMKALQENDPSWPSLMLKLCTALKTADKLVSCASIDAEQLLQKVELLERLLVRGDR  118

Query  367  AVTA  378
            AVTA
Sbjct  119  AVTA  122


>gi|115475139|ref|NP_001061166.1|  Os08g0190300 [Oryza sativa (japonica cultivar-group)]
 gi|40253808|dbj|BAD05745.1|  putative RPR1 [Oryza sativa (japonica cultivar-group)]
 gi|40253848|dbj|BAD05784.1|  putative RPR1 [Oryza sativa (japonica cultivar-group)]
 gi|113623135|dbj|BAF23080.1|  Os08g0190300 [Oryza sativa (japonica cultivar-group)]
Length=1031

 Score = 36.2 bits (82),  Expect = 0.073
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
 Frame = +2

Query  50   ATWGMNPXQXQTTSTTMIPLF--HHHHHQFLMPMMS  151
            A W   P +  TT TT  PL   HHHHH +L+P ++
Sbjct  853  APWNPPPPETTTTPTTPPPLQGHHHHHHHYLLPNLA  888


>gi|116059314|emb|CAL55021.1|  Kinesin (KAR3 subfamily) (ISS) [Ostreococcus tauri]
Length=1310

 Score = 31.6 bits (70),  Expect = 1.8
 Identities = 29/105 (27%), Positives = 44/105 (41%), Gaps = 3/105 (2%)
 Frame = +1

Query  157  SLDLTKLFQENYEKLNEALSGSDHSWTAL-TLKLCTALETANKLVQSTDTNIRLXSEKDA  333
            S+D +K F+   EKL + L        AL   KLC A E A K    T+   +L +    
Sbjct  681  SIDSSKSFKSAIEKLRDTLESEKQEALALQAAKLCNAAE-AEKEHAMTELRSQLQAAASR  739

Query  334  ELEKIVKRGDSAVTADRAISIA-LNQKGGSSVGSQEKEQSRSHQE  465
            E + ++    +   + R   I  L QK    +    + +SR H E
Sbjct  740  EKQALIAELQTFGGSTRTKEITELEQKAQRVLMESNERESRLHAE  784


>gi|108708336|gb|ABF96131.1|  retrotransposon protein, putative, Ty1-copia subclass [Oryza 
sativa (japonica cultivar-group)]
Length=1275

 Score = 31.2 bits (69),  Expect = 2.4
 Identities = 18/79 (22%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
 Frame = +1

Query  160  LDLTKLFQENYEKLNEAL-SGSDHSWTALTLKLCTALETANKLVQSTDTNIRLXSEKDAE  336
            L+L K  +E Y++  E +   +++ W  L L+    +   N+ V +  + ++   ++  E
Sbjct  77   LNLWKALKERYDQQKELIWPETNYEWVHLRLQDFKTVAEYNRAVHNICSRLKFCEQEPTE  136

Query  337  LEKIVKRGDSAVTADRAIS  393
             EKI K   + +  DR ++
Sbjct  137  AEKIEKTLSTMLPEDRILT  155


>gi|92896488|gb|ABE93218.1|  Zinc finger, RanBP2-type [Medicago truncatula]
Length=379

 Score = 31.2 bits (69),  Expect = 2.4
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 0/32 (0%)
 Frame = +2

Query  83   TTSTTMIPLFHHHHHQFLMPMMSLNPWTSPNS  178
            +TS +  P  HHHHHQ L+  + + P  + NS
Sbjct  3    STSPSQSPPSHHHHHQPLLSSLVVRPSLTENS  34


>gi|38344533|emb|CAD39859.2|  OSJNBa0036B17.9 [Oryza sativa (japonica cultivar-group)]
Length=421

 Score = 30.4 bits (67),  Expect = 4.0
 Identities = 18/79 (22%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
 Frame = +1

Query  160  LDLTKLFQENYEKLNEAL-SGSDHSWTALTLKLCTALETANKLVQSTDTNIRLXSEKDAE  336
            L+L K  +E Y++  E +   +++ W  L L+    +   N  V +  + ++   ++  E
Sbjct  167  LNLWKALKERYDQQKELIWPEANYEWVHLRLQDFKTMAEYNHAVHNICSRLKFCEQEPTE  226

Query  337  LEKIVKRGDSAVTADRAIS  393
             EKI K   + +  DR ++
Sbjct  227  AEKIEKTLSTMLQEDRILT  245


>gi|130267|sp|P20422|PLAS_DAUCA  Plastocyanin
Length=97

 Score = 30.4 bits (67),  Expect = 4.0
 Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 6/40 (15%)
 Frame = +1

Query  118  PSSSIFDANDVPQSLDLTKLFQENYEKLNEALSGSDHSWT  237
            P + +FD ++VP  +D++K+ QE+Y      L G+  S+T
Sbjct  36   PHNIVFDEDEVPAGVDVSKISQEDY------LDGAGESFT  69


>gi|38568046|emb|CAD40420.3|  OSJNBa0065J03.16 [Oryza sativa (japonica cultivar-group)]
Length=347

 Score = 30.0 bits (66),  Expect = 5.2
 Identities = 18/79 (22%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
 Frame = +1

Query  160  LDLTKLFQENYEKLNEAL-SGSDHSWTALTLKLCTALETANKLVQSTDTNIRLXSEKDAE  336
            L+L K  +E Y++  E +   +++ W  L L+    +   N  V +  + ++   ++  E
Sbjct  77   LNLWKALKERYDQQKELIWPKANYEWVHLCLQDFQTVAEYNHAVHNICSRLKFCEQEPTE  136

Query  337  LEKIVKRGDSAVTADRAIS  393
             EKI K   + +  DR ++
Sbjct  137  AEKIEKTLSTILPEDRILT  155


>gi|115480037|ref|NP_001063612.1|  Os09g0507100 [Oryza sativa (japonica cultivar-group)]
 gi|113631845|dbj|BAF25526.1|  Os09g0507100 [Oryza sativa (japonica cultivar-group)]
Length=472

 Score = 29.6 bits (65),  Expect = 6.9
 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 0/32 (0%)
 Frame = +2

Query  86   TSTTMIPLFHHHHHQFLMPMMSLNPWTSPNSS  181
            T+TT     HHHHHQ L    +L+  +SP +S
Sbjct  325  TTTTTTAHHHHHHHQVLDSDCALSLLSSPANS  356


>gi|27311771|gb|AAO00851.1|  Unknown protein [Arabidopsis thaliana]
 gi|30725542|gb|AAP37793.1|  At5g61270 [Arabidopsis thaliana]
Length=1157

 Score = 29.6 bits (65),  Expect = 6.9
 Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 0/37 (0%)
 Frame = +2

Query  113  HHHHHQFLMPMMSLNPWTSPNSSRKTMRN*MRHFLAR  223
            HHHHH    P   L+  TS    ++ +   M H  AR
Sbjct  414  HHHHHHHRQPAKELDATTSEADRQRVVAQQMLHHQAR  450


>gi|15238724|ref|NP_197898.1|  ZFP3 (ZINC FINGER PROTEIN 3); nucleic acid binding / transcription 
factor/ zinc ion binding [Arabidopsis thaliana]
 gi|27923889|sp|Q39262|ZFP3_ARATH  Zinc finger protein 3
 gi|790677|gb|AAA87299.1|  zinc finger protein
 gi|4063732|gb|AAC98442.1|  ZFP3 zinc finger protein [Arabidopsis thaliana]
 gi|30725290|gb|AAP37667.1|  At5g25160 [Arabidopsis thaliana]
 gi|110743711|dbj|BAE99692.1|  ZFP3 zinc finger protein [Arabidopsis thaliana]
Length=235

 Score = 29.3 bits (64),  Expect = 9.0
 Identities = 10/16 (62%), Positives = 12/16 (75%), Gaps = 0/16 (0%)
 Frame = +2

Query  110  FHHHHHQFLMPMMSLN  157
            FHHHHHQ +M   S+N
Sbjct  170  FHHHHHQMMMMAPSVN  185

  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 15, 2007  4:53 AM
  Number of letters in database: 101,054,579
  Number of sequences in database:  283,349
Lambda     K      H
   0.311    0.129    0.350 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283349
Number of Hits to DB: 322
Number of extensions: 4
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 537
Length of database: 101054579
Length adjustment: 106
Effective length of query: 431
Effective length of database: 71019585
Effective search space: 5184429705
Effective search space used: 5184429705
T: 12
A: 40
X1: 16 (7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 64 (29.3 bits)