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BLASTX 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman 
(1997), "Gapped BLAST and PSI-BLAST: a new generation of 
protein database search programs", Nucleic Acids Res. 25:3389-3402.

RID: 1168944904-7830-131413233320.BLASTQ4


Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
           4,458,890 sequences; 1,532,996,420 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Query=  Contig313
Length=680


Distribution of 11 Blast Hits on the Query Sequence



                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|19920126|gb|AAM08558.1|AC092749_11  Hypothetical protein [Oryz   150    4e-41 Gene info
gi|115481632|ref|NP_001064409.1|  Os10g0350800 [Oryza sativa (...   137    3e-32 Gene info
gi|116054885|emb|CAL56962.1|  Predicted DNA damage inducible p...  58.9    1e-08
gi|115434114|ref|NP_001041815.1|  Os01g0112800 [Oryza sativa (...  30.8    4.9   Gene info
gi|115434118|ref|NP_001041817.1|  Os01g0113100 [Oryza sativa (...  30.8    4.9   Gene info
gi|115436814|ref|NP_001043143.1|  Os01g0504500 [Oryza sativa (...  30.8    4.9   Gene info
gi|90657550|gb|ABD96850.1|  hypothetical protein [Cleome spinosa]  25.8    5.3  
gi|111184720|gb|ABH08429.1|  hypothetical protein [Beta vulgar...  30.0    8.3  
Alignments
>gi|19920126|gb|AAM08558.1|AC092749_11 Gene info Hypothetical protein [Oryza sativa] Length=323 Score = 150 bits (380), Expect(2) = 4e-41 Identities = 76/144 (52%), Positives = 104/144 (72%), Gaps = 10/144 (6%) Frame = +2 Query 122 PTTNDIKGANTTIPSMSDILASSRAQKLDLRLQALGPLFRITAKSL--------ETNR-E 274 P + A+ P+M+DI+++SRAQ L +RL LGP FR+TA ET E Sbjct 9 PAASPAARASVVFPTMADIMSASRAQGLRVRLTTLGPFFRVTAARRGGGSGGEGETEEVE 68 Query 275 LGRAEGLIRVWFGGRILHLDSIKLKRETMGM-ERSIFGIGLFIGAVAIRYGYDCGCKTAE 451 LGRA+G++R W GG +LHLDS+++ R T+ + +R +FG+G+F+GAVA+R+G+D GCK AE Sbjct 69 LGRAQGVVRPWPGGAVLHLDSMRMSRATLQVPDRPLFGLGVFLGAVAVRHGFDAGCKRAE 128 Query 452 LLAINDSDLYHSKLGRFYKRIGFK 523 LLAIND+DLYHSKL RFY R+GFK Sbjct 129 LLAINDTDLYHSKLVRFYSRMGFK 152 Score = 37.7 bits (86), Expect(2) = 4e-41 Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 0/52 (0%) Frame = +3 Query 513 LGSKVVHEVNGSTIGGYGSHANLGRNGTRMDASIXELLLNGXRSSYELICXL 668 +G K VHEV+GS++ G GTRMDA I +LL+ +S C + Sbjct 149 MGFKTVHEVDGSSMIDLAHMLVWGGRGTRMDADIEQLLIKWSKSDAPTRCRI 200 >gi|115481632|ref|NP_001064409.1| Gene info Os10g0350800 [Oryza sativa (japonica cultivar-group)] gi|78708315|gb|ABB47290.1| Gene info UMUC-like DNA repair family protein, putative [Oryza sativa (japonica cultivar-group)] gi|113639018|dbj|BAF26323.1| Gene info Os10g0350800 [Oryza sativa (japonica cultivar-group)] Length=169 Score = 137 bits (346), Expect = 3e-32 Identities = 69/135 (51%), Positives = 97/135 (71%), Gaps = 10/135 (7%) Frame = +2 Query 122 PTTNDIKGANTTIPSMSDILASSRAQKLDLRLQALGPLFRITAKSL--------ETNR-E 274 P + A+ P+M+DI+++SRAQ L +RL LGP FR+TA ET E Sbjct 9 PAASPAARASVVFPTMADIMSASRAQGLRVRLTTLGPFFRVTAARRGGGSGGEGETEEVE 68 Query 275 LGRAEGLIRVWFGGRILHLDSIKLKRETMGM-ERSIFGIGLFIGAVAIRYGYDCGCKTAE 451 LGRA+G++R W GG +LHLDS+++ R T+ + +R +FG+G+F+GAVA+R+G+D GCK AE Sbjct 69 LGRAQGVVRPWPGGAVLHLDSMRMSRATLQVPDRPLFGLGVFLGAVAVRHGFDAGCKRAE 128 Query 452 LLAINDSDLYHSKLG 496 LLAIND+DLYHSK+G Sbjct 129 LLAINDTDLYHSKIG 143 >gi|116054885|emb|CAL56962.1| Predicted DNA damage inducible protein (ISS) [Ostreococcus tauri] Length=148 Score = 58.9 bits (141), Expect(2) = 1e-08 Identities = 31/76 (40%), Positives = 48/76 (63%), Gaps = 11/76 (14%) Frame = +2 Query 320 ILHLDSIKL--------KRETMGMERSIFGIGLFIGAVAIRYGYDCGCKTAELLAINDSD 475 ILH+DS+++ +R TM RS FGI + +G +++ + + GCK ELLAI+D + Sbjct 29 ILHMDSMRVYNSKVASGERATM---RSTFGIAILLGTMSLLFASEAGCKKCELLAIDDGN 85 Query 476 LYHSKLGRFYKRIGFK 523 Y KL R+Y R+GF+ Sbjct 86 GYAEKLVRYYGRLGFE 101 Score = 20.4 bits (41), Expect(2) = 1e-08 Identities = 6/13 (46%), Positives = 10/13 (76%), Gaps = 0/13 (0%) Frame = +1 Query 553 LGDMAHMLIWGGM 591 L D+ +L+WGG+ Sbjct 111 LRDLPDLLVWGGV 123 >gi|115434114|ref|NP_001041815.1| Gene info Os01g0112800 [Oryza sativa (japonica cultivar-group)] gi|113531346|dbj|BAF03729.1| Gene info Os01g0112800 [Oryza sativa (japonica cultivar-group)] Length=1344 Score = 30.8 bits (68), Expect = 4.9 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 9/75 (12%) Frame = +2 Query 149 NTTIPSMSDILASSRAQKLDLRLQALGPLFRITAKSLETNRELGRAEGLIRVWFGGRILH 328 NT+ S + S+ Q D+ L +L P +T S+ + G+ W G I+H Sbjct 822 NTSSSSSRTQVVSNENQDDDIILDSLQPHSNLTELSI-----VNLGGGMAPSWLGSNIIH 876 Query 329 LDSIKLKRETMGMER 373 LD++ L G+ER Sbjct 877 LDTLHLD----GLER 887 >gi|115434118|ref|NP_001041817.1| Gene info Os01g0113100 [Oryza sativa (japonica cultivar-group)] gi|113531348|dbj|BAF03731.1| Gene info Os01g0113100 [Oryza sativa (japonica cultivar-group)] Length=1851 Score = 30.8 bits (68), Expect = 4.9 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 9/75 (12%) Frame = +2 Query 149 NTTIPSMSDILASSRAQKLDLRLQALGPLFRITAKSLETNRELGRAEGLIRVWFGGRILH 328 NT+ S + S+ Q D+ L +L P +T S+ + G+ W G I+H Sbjct 1329 NTSSSSSRTQVVSNENQDDDIILDSLQPHSNLTELSI-----VNLGGGMAPSWLGSNIIH 1383 Query 329 LDSIKLKRETMGMER 373 LD++ L G+ER Sbjct 1384 LDTLHLD----GLER 1394 >gi|115436814|ref|NP_001043143.1| Gene info Os01g0504500 [Oryza sativa (japonica cultivar-group)] gi|56201647|dbj|BAD73111.1| Gene info putative NIC2 [Oryza sativa (japonica cultivar-group)] gi|113532674|dbj|BAF05057.1| Gene info Os01g0504500 [Oryza sativa (japonica cultivar-group)] Length=502 Score = 30.8 bits (68), Expect = 4.9 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 0/45 (0%) Frame = -2 Query 193 SRGGQYVRHGWYSGISSFDVIGCRIIIWFGAILEGIQMGFWFNLV 59 SRG + G Y + +F ++G + ++FG + MGFW +V Sbjct 418 SRGCGWQHLGAYVNLGAFYLVGVPVALFFGFAMHLGGMGFWMGMV 462 >gi|90657550|gb|ABD96850.1| hypothetical protein [Cleome spinosa] Length=328 Score = 25.8 bits (55), Expect(2) = 5.3 Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 0/29 (0%) Frame = -2 Query 595 VPFLPRLACEPYPPIVEPFTSCTTFEPNP 509 +PFLP L P P + P S PNP Sbjct 192 IPFLPSLPPLPPLPSLPPLPSLPPLPPNP 220 Score = 23.5 bits (49), Expect(2) = 5.3 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 4/47 (8%) Frame = -3 Query 417 RIATAPINKPIPKIDLSMPIVSLLSLMESRCRILPPNQTLISPSALP 277 ++ + + KP + D P + L +LPPN L PS LP Sbjct 227 KVDSLGVKKPDAQPDFFFPPIPFLPPPS----LLPPNPLLPPPSGLP 269 >gi|111184720|gb|ABH08429.1| hypothetical protein [Beta vulgaris] gi|121501698|gb|ABM55239.1| hypothetical protein [Beta vulgaris] Length=403 Score = 30.0 bits (66), Expect = 8.3 Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 4/73 (5%) Frame = -2 Query 634 PFNRSSSILASIRVPFLPRLACEPYPP----IVEPFTSCTTFEPNPFVEPTELGMVKIRV 467 P N S ++ S +P + EP PP + PFT + P+ F P+ +K + Sbjct 185 PSNEDSPLVLSDNEEQVPYILKEPIPPPTPKLSVPFTKIPSISPSSFFVPSSFEQLKDEI 244 Query 466 IDGKQLSSLTTAV 428 +S +T + Sbjct 245 KGPNPFASTSTTL 257
  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 15, 2007  4:53 AM
  Number of letters in database: 101,054,579
  Number of sequences in database:  283,349
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283349
Number of Hits to DB: 467
Number of extensions: 7
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 680
Length of database: 101054579
Length adjustment: 109
Effective length of query: 571
Effective length of database: 70169538
Effective search space: 8209835946
Effective search space used: 8209835946
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 65 (29.6 bits)