Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168945110-11504-143897896149.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig325 Length=537
Related Structures Score E Sequences producing significant alignments: (Bits) Value gi|11133775|sp|Q43116|PDI_RICCO Protein disulfide-isomerase p... 215 9e-56 gi|47933777|gb|AAT39459.1| protein disulfide isomerase [Ipomoea 212 7e-55 gi|266743|sp|P29828|PDI_MEDSA Protein disulfide-isomerase pre... 194 1e-49 gi|11133818|sp|Q9XF61|PDI_DATGL Protein disulfide-isomerase p... 193 4e-49 gi|166418|gb|AAA32662.1| putative endomembrane protein; putative 189 5e-48 gi|15219086|ref|NP_173594.1| ATPDIL1-1; electron transporter/... 188 1e-47 gi|15223975|ref|NP_177875.1| ATPDIL1-2; electron transporter/... 186 6e-47 gi|77999357|gb|ABB17025.1| protein disulfide isomerase [Brassica 180 2e-45 gi|30687521|ref|NP_849696.1| ATPDIL1-1; electron transporter/... 173 4e-43 gi|59861261|gb|AAX09960.1| protein disulfide isomerase [Zea mays 166 5e-41 gi|62546209|gb|AAX85991.1| protein disulfide isomerase [Oryza... 164 1e-40 gi|115484585|ref|NP_001067436.1| Os11g0199200 [Oryza sativa (... 164 1e-40 gi|1709619|sp|P52588|PDI_MAIZE Protein disulfide-isomerase pr... 164 2e-40 gi|7209794|dbj|BAA92322.1| protein disulfide isomerase [Oryza sa 164 2e-40 gi|59861263|gb|AAX09961.1| protein disulfide isomerase [Zea mays 161 1e-39 gi|48093453|gb|AAT40103.1| protein disulfide isomerase [Triticum 160 3e-39 gi|47118048|gb|AAT11163.1| protein disulfide isomerase [Triticum 160 3e-39 gi|13925723|gb|AAK49423.1|AF262979_1 protein disulfide isomer... 160 3e-39 gi|67508765|emb|CAI30632.1| protein disulfide isomerase precu... 160 3e-39 gi|13925728|gb|AAK49425.1|AF262981_1 protein disulfide isomer... 160 3e-39 gi|493591|gb|AAA70346.1| disulfide isomerase 159 4e-39 gi|115446679|ref|NP_001047119.1| Os02g0554900 [Oryza sativa (... 159 4e-39 gi|1709617|sp|P80284|PDI_HORVU Protein disulfide-isomerase pr... 159 4e-39 gi|47118050|gb|AAT11164.1| protein disulfide isomerase [Triticum 159 6e-39 gi|13925726|gb|AAK49424.1|AF262980_1 protein disulfide isomer... 159 6e-39 gi|1709620|sp|P52589|PDI_WHEAT Protein disulfide-isomerase pr... 158 1e-38 gi|38344061|emb|CAE02742.2| OSJNBa0006B20.4 [Oryza sativa (ja... 151 2e-36 gi|47118062|gb|AAT11169.1| protein disulfide isomerase [Triticum 128 1e-29 gi|9188565|dbj|BAA99572.1| thioredoxin [Chlorella vulgaris] 122 1e-27 gi|47118055|gb|AAT11166.1| protein disulfide isomerase [Triticum 111 2e-24 gi|32400792|gb|AAP80628.1|AF475106_1 protein disulfide isomerase 108 1e-23 gi|77745442|gb|ABB02620.1| disulfide-isomerase precursor-like pr 90.5 3e-18 gi|88683142|emb|CAJ77505.1| putative disulphide isomerase [Solan 90.5 3e-18 gi|2708314|gb|AAC49896.1| protein disulfide isomerase RB60 [C... 90.1 4e-18 gi|115462193|ref|NP_001054696.1| Os05g0156300 [Oryza sativa (... 88.6 1e-17 gi|79324941|ref|NP_001031555.1| ATPDIL2-1; electron transport... 88.6 1e-17 gi|42571269|ref|NP_973708.1| ATPDIL2-1; electron transporter/... 88.6 1e-17 gi|15226610|ref|NP_182269.1| ATPDIL2-1; electron transporter/... 88.6 1e-17 gi|115436382|ref|NP_001042949.1| Os01g0339900 [Oryza sativa (... 87.8 2e-17 gi|59861269|gb|AAX09964.1| protein disulfide isomerase [Zea mays 87.4 3e-17 gi|49257115|dbj|BAD24715.1| protein disulfide isomerase-like pro 87.0 4e-17 gi|1848212|emb|CAA72092.1| protein disulfide-isomerase precursor 87.0 4e-17 gi|92877262|gb|ABE84425.1| Thioredoxin domain 2 [Medicago trunca 86.7 5e-17 gi|729442|sp|P38661|PDIA6_MEDSA Probable protein disulfide-is... 86.7 5e-17 gi|5902592|gb|AAD55566.1|AF110784_1 protein disulfide isomera... 86.3 6e-17 gi|59861271|gb|AAX09965.1| protein disulfide isomerase [Zea mays 85.5 1e-16 gi|51572408|gb|AAU07696.1| plastid protein disulfide isomeras... 84.0 3e-16 gi|116057828|emb|CAL54031.1| Thioredoxin/protein disulfide is... 83.6 4e-16 gi|59861267|gb|AAX09963.1| protein disulfide isomerase [Zea mays 83.6 4e-16 gi|49615095|dbj|BAD24714.2| protein disulfide isomerase-like pro 82.8 7e-16 gi|49257111|dbj|BAD24713.1| protein disufide isomerase-like prot 82.8 7e-16 gi|59861265|gb|AAX09962.1| protein disulfide isomerase [Zea mays 82.8 7e-16 gi|21593313|gb|AAM65262.1| protein disulfide isomerase precur... 81.3 2e-15 gi|30697408|ref|NP_568926.2| ATPDIL1-4; electron transporter/... 81.3 2e-15 gi|30697404|ref|NP_851234.1| ATPDIL1-4; electron transporter/... 81.3 2e-15 gi|45593261|gb|AAS68180.1| putative protein disulphide isomer... 80.9 3e-15 gi|20805287|gb|AAM28648.1|AF430645_1 protein disulfide isomerase 80.5 3e-15 gi|115443599|ref|NP_001045579.1| Os02g0100100 [Oryza sativa (... 80.1 4e-15 gi|20805285|gb|AAM28647.1|AF430644_1 protein disulfide isomerase 78.6 1e-14 gi|10180029|gb|AAG13988.1|AF298829_1 putative protein disulfide- 77.8 2e-14 gi|12056117|emb|CAC21229.1| protein disulfide isomerase [Trit... 77.4 3e-14 gi|55792598|gb|AAV65391.1| plastid protein disulfide isomerase [ 77.4 3e-14 gi|51572409|gb|AAU07697.1| plastid protein disulfide isomeras... 75.9 8e-14 gi|28140231|gb|AAO26314.1| protein disulphide isomerase [Elaeis 75.9 8e-14 gi|11559422|dbj|BAB18780.1| disulfide isomerase [Cucumis sativus 74.7 2e-13 gi|55792593|gb|AAV65389.1| protein disulfide isomerase [Protothe 73.2 5e-13 gi|22331799|ref|NP_191056.2| ATPDIL1-3; electron transporter/... 72.4 9e-13 gi|4678297|emb|CAB41088.1| protein disulfide-isomerase-like prot 70.9 3e-12 gi|59861273|gb|AAX09966.1| protein disulfide isomerase [Zea mays 67.4 3e-11 gi|116057012|emb|CAL51439.1| Thioredoxin/protein disulfide is... 66.2 7e-11 gi|15225757|ref|NP_180851.1| ATPDIL2-3; electron transporter/... 65.5 1e-10 gi|7211992|gb|AAF40463.1|AC004809_21 Strong simialrity to the... 65.1 1e-10 gi|79336174|ref|NP_171990.3| ATPDIL2-2; electron transporter/... 65.1 1e-10 gi|115446627|ref|NP_001047093.1| Os02g0550300 [Oryza sativa (... 62.4 1e-09 gi|115458504|ref|NP_001052852.1| Os04g0436300 [Oryza sativa (... 61.6 2e-09 gi|51535927|dbj|BAD38009.1| putative protein disulfide-isomer... 61.6 2e-09 gi|115479475|ref|NP_001063331.1| Os09g0451500 [Oryza sativa (... 61.6 2e-09 gi|116058201|emb|CAL53390.1| Thioredoxin/protein disulfide is... 61.2 2e-09 gi|62320124|dbj|BAD94313.1| disulfide isomerase like protein [Ar 60.5 4e-09 gi|42564231|ref|NP_188232.2| ATPDIL1-6; electron transporter/... 60.5 4e-09 gi|1729935|sp|P23400|TRXM_CHLRE Thioredoxin M-type, chloropla... 60.5 4e-09 gi|6573652|pdb|1DBY|A Chain A, Nmr Structures Of Chloroplast ... 60.5 4e-09 gi|18241|emb|CAA44209.1| thioredoxin Ch2 [Chlamydomonas reinhard 60.5 4e-09 gi|840745|emb|CAA55398.1| thioredoxin m [Chlamydomonas reinhardt 60.5 4e-09 gi|116057647|emb|CAL53850.1| Thioredoxin/protein disulfide is... 58.9 1e-08 gi|42562703|ref|NP_175636.2| ATPDIL1-5; electron transporter/... 58.5 1e-08 gi|59861277|gb|AAX09968.1| protein disulfide isomerase [Zea mays 57.4 3e-08 gi|10835723|pdb|1FB0|A Chain A, Crystal Structure Of Thioredo... 57.4 3e-08 gi|2507458|sp|P07591|TRXM_SPIOL Thioredoxin M-type, chloropla... 57.4 3e-08 gi|18159032|pdb|1GL8|A Chain A, Solution Structure Of Thiored... 57.4 3e-08 gi|21354|emb|CAA35827.1| unnamed protein product [Spinacia olera 57.4 3e-08 gi|48093450|gb|AAT40100.1| protein disulfide isomerase [Triticum 56.6 5e-08 gi|59861279|gb|AAX09969.1| protein disulfide isomerase [Zea mays 56.2 7e-08 gi|15223058|ref|NP_172274.1| ATPDIL5-1; electron transporter/... 56.2 7e-08 gi|116310104|emb|CAH67123.1| H0315E07.1 [Oryza sativa (indica cu 55.8 9e-08 gi|115458462|ref|NP_001052831.1| Os04g0432500 [Oryza sativa (... 55.8 9e-08 gi|68611228|emb|CAE03042.3| OSJNBa0084A10.17 [Oryza sativa (japo 55.8 9e-08 gi|11135471|sp|Q9ZP20|TRXM_ORYSA Thioredoxin M-type, chloropl... 55.5 1e-07 gi|15594012|emb|CAC69854.1| putative thioredoxin m2 [Pisum sativ 55.1 2e-07 gi|12323134|gb|AAG51554.1|AC037424_19 protein disulfide isome... 54.7 2e-07
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 446 Number of extensions: 3 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 537 Length of database: 101054579 Length adjustment: 106 Effective length of query: 431 Effective length of database: 71019585 Effective search space: 5184429705 Effective search space used: 5184429705 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 64 (29.3 bits)