RID=1168945404-13491-115585887158.BLASTQ4, Contig328

BLASTX 2.2.15 [Oct-15-2006]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168945404-13491-115585887158.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Query=  Contig328
Length=232

Distribution of 18 Blast Hits on the Query Sequence

                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|62319553|dbj|BAD94992.1|  hypothetical protein [Arabidopsis th  65.1    7e-11 
gi|15219147|ref|NP_173069.1|  unknown protein [Arabidopsis tha...  65.1    7e-11 
gi|115449169|ref|NP_001048364.1|  Os02g0792900 [Oryza sativa (...  63.9    2e-10 
gi|6862921|gb|AAF30310.1|AC018907_10  hypothetical protein [Arabi  57.8    1e-08
gi|42563541|ref|NP_187268.2|  unknown protein [Arabidopsis tha...  57.8    1e-08 
gi|108709225|gb|ABF97020.1|  TMS membrane family protein, puta...  55.5    6e-08
gi|115453751|ref|NP_001050476.1|  Os03g0454100 [Oryza sativa (...  55.5    6e-08 
gi|116061682|emb|CAL52400.1|  PREDICTED OJ1249_F12.26 gene produc  48.1    9e-06
gi|18413990|ref|NP_567403.1|  unknown protein [Arabidopsis tha...  39.7    0.003 
gi|30682441|ref|NP_849373.1|  unknown protein [Arabidopsis thalia  39.7    0.003 
gi|30685601|ref|NP_850202.1|  unknown protein [Arabidopsis thalia  38.5    0.007 
gi|92893080|gb|ABE91594.1|  TMS membrane protein/tumour differ...  36.6    0.027
gi|116310261|emb|CAH67268.1|  OSIGBa0145C12.5 [Oryza sativa (indi  35.8    0.047
gi|115459316|ref|NP_001053258.1|  Os04g0506300 [Oryza sativa (...  35.8    0.047 
gi|42565162|ref|NP_189089.3|  unknown protein [Arabidopsis tha...  35.8    0.047 
gi|115434890|ref|NP_001042203.1|  Os01g0179800 [Oryza sativa (...  35.4    0.061 
gi|116058938|emb|CAL54645.1|  Tumor differentially expressed (...  34.7    0.10 
gi|102139864|gb|ABF70022.1|  hypothetical protein MA4_8L21.50 [Mu  28.1    9.8

Alignments

 

>gi|62319553|dbj|BAD94992.1|  hypothetical protein [Arabidopsis thaliana]
Length=57

 Score = 65.1 bits (157),  Expect = 7e-11
 Identities = 25/32 (78%), Positives = 31/32 (96%), Gaps = 0/32 (0%)
 Frame = +2

Query  11   PSVWVRIITGWATAGLYLWSLIAPILFPEREF  106
            PSVWVR++T WATAGL++WSL+APILFP+REF
Sbjct  26   PSVWVRVVTSWATAGLFIWSLVAPILFPDREF  57


>gi|15219147|ref|NP_173069.1|  unknown protein [Arabidopsis thaliana]
 gi|6587821|gb|AAF18512.1|AC010924_25  Contains similarity to gb|AF181686 membrane protein TMS1d from 
Drosophila melanogaster.  ESTs gb|R64994, gb|AI994832, gb|Z47674 
come from this gene. [Arabidopsis thaliana]
Length=412

 Score = 65.1 bits (157),  Expect = 7e-11
 Identities = 25/32 (78%), Positives = 31/32 (96%), Gaps = 0/32 (0%)
 Frame = +2

Query  11   PSVWVRIITGWATAGLYLWSLIAPILFPEREF  106
            PSVWVR++T WATAGL++WSL+APILFP+REF
Sbjct  381  PSVWVRVVTSWATAGLFIWSLVAPILFPDREF  412


>gi|115449169|ref|NP_001048364.1|  Os02g0792900 [Oryza sativa (japonica cultivar-group)]
 gi|47497137|dbj|BAD19186.1|  putative tumor differentially expressed protein 1 [Oryza sativa 
(japonica cultivar-group)]
 gi|47497584|dbj|BAD19654.1|  putative tumor differentially expressed protein 1 [Oryza sativa 
(japonica cultivar-group)]
 gi|113537895|dbj|BAF10278.1|  Os02g0792900 [Oryza sativa (japonica cultivar-group)]
Length=414

 Score = 63.9 bits (154),  Expect = 2e-10
 Identities = 26/32 (81%), Positives = 30/32 (93%), Gaps = 0/32 (0%)
 Frame = +2

Query  11   PSVWVRIITGWATAGLYLWSLIAPILFPEREF  106
            PSVWVRI T WATAGLY+WSL+AP+LFP+REF
Sbjct  383  PSVWVRIATQWATAGLYIWSLVAPLLFPDREF  414


>gi|6862921|gb|AAF30310.1|AC018907_10  hypothetical protein [Arabidopsis thaliana]
Length=315

 Score = 57.8 bits (138),  Expect = 1e-08
 Identities = 22/31 (70%), Positives = 28/31 (90%), Gaps = 0/31 (0%)
 Frame = +2

Query  14   SVWVRIITGWATAGLYLWSLIAPILFPEREF  106
            SVWV+I TGW TAGLY+W+LIAP++ P+REF
Sbjct  284  SVWVKICTGWVTAGLYIWTLIAPLILPDREF  314


>gi|42563541|ref|NP_187268.2|  unknown protein [Arabidopsis thaliana]
 gi|71143054|gb|AAZ23918.1|  At3g06170 [Arabidopsis thaliana]
Length=409

 Score = 57.8 bits (138),  Expect = 1e-08
 Identities = 22/31 (70%), Positives = 28/31 (90%), Gaps = 0/31 (0%)
 Frame = +2

Query  14   SVWVRIITGWATAGLYLWSLIAPILFPEREF  106
            SVWV+I TGW TAGLY+W+LIAP++ P+REF
Sbjct  378  SVWVKICTGWVTAGLYIWTLIAPLILPDREF  408


>gi|108709225|gb|ABF97020.1|  TMS membrane family protein, putative, expressed [Oryza sativa 
(japonica cultivar-group)]
Length=372

 Score = 55.5 bits (132),  Expect = 6e-08
 Identities = 21/31 (67%), Positives = 28/31 (90%), Gaps = 0/31 (0%)
 Frame = +2

Query  14   SVWVRIITGWATAGLYLWSLIAPILFPEREF  106
            +VWVRI T WATA LY+W+L+AP+LFP+R+F
Sbjct  341  TVWVRICTEWATAALYIWTLVAPLLFPDRDF  371


>gi|115453751|ref|NP_001050476.1|  Os03g0454100 [Oryza sativa (japonica cultivar-group)]
 gi|29244652|gb|AAO73245.1|  putative membrane protein [Oryza sativa (japonica cultivar-group)]
 gi|108709224|gb|ABF97019.1|  TMS membrane family protein, putative, expressed [Oryza sativa 
(japonica cultivar-group)]
 gi|113548947|dbj|BAF12390.1|  Os03g0454100 [Oryza sativa (japonica cultivar-group)]
Length=417

 Score = 55.5 bits (132),  Expect = 6e-08
 Identities = 21/31 (67%), Positives = 28/31 (90%), Gaps = 0/31 (0%)
 Frame = +2

Query  14   SVWVRIITGWATAGLYLWSLIAPILFPEREF  106
            +VWVRI T WATA LY+W+L+AP+LFP+R+F
Sbjct  386  TVWVRICTEWATAALYIWTLVAPLLFPDRDF  416


>gi|116061682|emb|CAL52400.1|  PREDICTED OJ1249_F12.26 gene product (ISS) [Ostreococcus tauri]
Length=423

 Score = 48.1 bits (113),  Expect = 9e-06
 Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 0/31 (0%)
 Frame = +2

Query  14   SVWVRIITGWATAGLYLWSLIAPILFPEREF  106
            SVWV+  + WAT  +Y W L+AP LFPEREF
Sbjct  393  SVWVKYFSVWATGTIYAWCLVAPALFPEREF  423


>gi|18413990|ref|NP_567403.1|  unknown protein [Arabidopsis thaliana]
 gi|16604677|gb|AAL24131.1|  unknown protein [Arabidopsis thaliana]
 gi|21436351|gb|AAM51345.1|  unknown protein [Arabidopsis thaliana]
Length=394

 Score = 39.7 bits (91),  Expect = 0.003
 Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 0/30 (0%)
 Frame = +2

Query  14   SVWVRIITGWATAGLYLWSLIAPILFPERE  103
            S WVRI+  W   G+Y+W L+AP++   R+
Sbjct  363  STWVRIVNEWLAVGVYIWMLVAPMVLKSRQ  392


>gi|30682441|ref|NP_849373.1|  unknown protein [Arabidopsis thaliana]
Length=394

 Score = 39.7 bits (91),  Expect = 0.003
 Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 0/30 (0%)
 Frame = +2

Query  14   SVWVRIITGWATAGLYLWSLIAPILFPERE  103
            S WVRI+  W   G+Y+W L+AP++   R+
Sbjct  363  STWVRIVNEWLAVGVYIWMLVAPMVLKSRQ  392


>gi|30685601|ref|NP_850202.1|  unknown protein [Arabidopsis thaliana]
Length=421

 Score = 38.5 bits (88),  Expect = 0.007
 Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 0/29 (0%)
 Frame = +2

Query  14   SVWVRIITGWATAGLYLWSLIAPILFPER  100
            S WV+I+  W  A +YLW LIAPI+   R
Sbjct  379  STWVKIVNEWFAAAIYLWKLIAPIVRQHR  407


>gi|92893080|gb|ABE91594.1|  TMS membrane protein/tumour differentially expressed protein 
[Medicago truncatula]
Length=406

 Score = 36.6 bits (83),  Expect = 0.027
 Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 0/30 (0%)
 Frame = +2

Query  14   SVWVRIITGWATAGLYLWSLIAPILFPERE  103
            S WVRI+  W    +YLW LIAP+++  R+
Sbjct  373  STWVRIVNEWLAVCVYLWMLIAPMIWKCRQ  402


>gi|116310261|emb|CAH67268.1|  OSIGBa0145C12.5 [Oryza sativa (indica cultivar-group)]
Length=398

 Score = 35.8 bits (81),  Expect = 0.047
 Identities = 12/25 (48%), Positives = 18/25 (72%), Gaps = 0/25 (0%)
 Frame = +2

Query  14   SVWVRIITGWATAGLYLWSLIAPIL  88
            S WV+II  W  A +Y+W LI+P++
Sbjct  352  STWVKIINEWFAASIYVWRLISPVI  376


>gi|115459316|ref|NP_001053258.1|  Os04g0506300 [Oryza sativa (japonica cultivar-group)]
 gi|113564829|dbj|BAF15172.1|  Os04g0506300 [Oryza sativa (japonica cultivar-group)]
Length=404

 Score = 35.8 bits (81),  Expect = 0.047
 Identities = 12/25 (48%), Positives = 18/25 (72%), Gaps = 0/25 (0%)
 Frame = +2

Query  14   SVWVRIITGWATAGLYLWSLIAPIL  88
            S WV+II  W  A +Y+W LI+P++
Sbjct  358  STWVKIINEWFAASIYVWRLISPVI  382


>gi|42565162|ref|NP_189089.3|  unknown protein [Arabidopsis thaliana]
 gi|17381270|gb|AAL36053.1|  AT3g24470/MXP5_4 [Arabidopsis thaliana]
 gi|37201996|gb|AAQ89613.1|  At3g24470/MXP5_4 [Arabidopsis thaliana]
Length=409

 Score = 35.8 bits (81),  Expect = 0.047
 Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 0/29 (0%)
 Frame = +2

Query  14   SVWVRIITGWATAGLYLWSLIAPILFPER  100
            S WVR++  W    +Y+W L+AP++   R
Sbjct  374  STWVRVVNEWLAVCVYIWMLVAPLILKSR  402


>gi|115434890|ref|NP_001042203.1|  Os01g0179800 [Oryza sativa (japonica cultivar-group)]
 gi|55296119|dbj|BAD67838.1|  unknown protein [Oryza sativa (japonica cultivar-group)]
 gi|55296297|dbj|BAD68077.1|  unknown protein [Oryza sativa (japonica cultivar-group)]
 gi|113531734|dbj|BAF04117.1|  Os01g0179800 [Oryza sativa (japonica cultivar-group)]
Length=421

 Score = 35.4 bits (80),  Expect = 0.061
 Identities = 12/26 (46%), Positives = 19/26 (73%), Gaps = 0/26 (0%)
 Frame = +2

Query  14   SVWVRIITGWATAGLYLWSLIAPILF  91
            S WVR++  W  A +Y+W +IAPI++
Sbjct  384  STWVRVVNEWLAAIVYIWMVIAPIVW  409


>gi|116058938|emb|CAL54645.1|  Tumor differentially expressed (TDE) protein (ISS) [Ostreococcus 
tauri]
Length=421

 Score = 34.7 bits (78),  Expect = 0.10
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 0/31 (0%)
 Frame = +2

Query  14   SVWVRIITGWATAGLYLWSLIAPILFPEREF  106
            S W ++   + +A LY W+LIAP +   REF
Sbjct  390  SAWAKVACAFVSAALYTWALIAPKVLKNREF  420


>gi|102139864|gb|ABF70022.1|  hypothetical protein MA4_8L21.50 [Musa acuminata]
Length=177

 Score = 28.1 bits (61),  Expect = 9.8
 Identities = 11/31 (35%), Positives = 13/31 (41%), Gaps = 0/31 (0%)
 Frame = -1

Query  100 PLWEQNRSNQRPEIKTCSCPPSYNPDPNRWP  8
           P  E       P    C CP S+ P P+ WP
Sbjct  12  PTAEMTTMAAPPIAPPCPCPSSHGPRPSSWP  42

  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 15, 2007  4:53 AM
  Number of letters in database: 101,054,579
  Number of sequences in database:  283,349
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283349
Number of Hits to DB: 184
Number of extensions: 1
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 232
Length of database: 101054579
Length adjustment: 48
Effective length of query: 184
Effective length of database: 87453827
Effective search space: 2536160983
Effective search space used: 2536160983
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 61 (28.1 bits)