Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168945684-2578-41796908694.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig342 Length=403
Score E Sequences producing significant alignments: (Bits) Value gi|13235340|emb|CAC33578.1| putative vacuolar ATP Synthase su... 75.5 2e-22 gi|60592630|dbj|BAD90911.1| vacuolar H+-ATPase catalytic subunit 75.5 2e-22 gi|60592632|dbj|BAD90912.1| vacuolar H+-ATPase catalytic subunit 75.5 2e-22 gi|15982954|gb|AAL11505.1|AF367445_1 V-ATPase catalytic subunit 75.5 2e-22 gi|3169287|gb|AAC17840.1| vacuolar H+-ATPase catalytic subunit [ 75.5 2e-22 gi|2493122|sp|Q39291|VATA_BRANA Vacuolar ATP synthase catalyt... 75.5 2e-22 gi|137460|sp|P09469|VATA_DAUCA Vacuolar ATP synthase catalyti... 75.5 2e-22 gi|12585490|sp|Q9SM09|VATA_CITUN Vacuolar ATP synthase cataly... 75.5 2e-22 gi|15219234|ref|NP_178011.1| VHA-A; ATP binding / hydrogen-tr... 75.5 2e-22 gi|401322|sp|P31405|VATA_GOSHI Vacuolar ATP synthase catalyti... 75.5 2e-22 gi|115469362|ref|NP_001058280.1| Os06g0662000 [Oryza sativa (... 75.5 2e-22 gi|1352830|sp|P49087|VATA_MAIZE Vacuolar ATP synthase catalyt... 75.5 2e-22 gi|66816974|gb|AAY56795.1| vacuolar H+-ATPase subunit A [Vigna u 75.5 2e-22 gi|1041768|gb|AAA79992.1| V-ATPase 66 kDa subunit 75.5 2e-22 gi|62321049|dbj|BAD94121.1| vacuolar-type H+-ATPase subunit A [A 75.5 2e-22 gi|6721571|dbj|BAA89598.1| vacuolar H+-ATPase A subunit [Citrus 75.5 2e-22 gi|14585885|gb|AAK67706.1| V-type H+-ATPase subunit A [Pisum sat 75.5 2e-22 gi|27884018|gb|AAO23981.1| vacuolar H+-ATPase A2 subunit isof... 75.5 5e-22 gi|27883932|gb|AAO23980.1| vacuolar H+-ATPase A1 subunit isof... 75.5 5e-22 gi|14149011|emb|CAC39166.1| putative V-type H+-ATPase catalyt... 75.5 5e-22 gi|2506211|sp|P13548|VATA_PHAAU Vacuolar ATP synthase catalyt... 73.6 6e-22 gi|115430413|emb|CAL48456.1| putative vacuolar H+-ATPase catalyt 73.6 6e-22 gi|115444549|ref|NP_001046054.1| Os02g0175400 [Oryza sativa (... 73.2 8e-22 gi|2493121|sp|Q39442|VATA_BETVU Vacuolar ATP synthase catalyt... 73.2 8e-22 gi|90025017|gb|ABD85016.1| vacuolar proton-ATPase subunit A [Tri 72.8 1e-21 gi|11527563|dbj|BAB18682.1| vacuolar proton-ATPase [Hordeum vulg 72.8 1e-21 gi|2493123|sp|Q40002|VATA_HORVU Vacuolar ATP synthase catalyt... 72.8 1e-21 gi|5869971|emb|CAB55557.1| H(+)-transporting ATP synthase [Scher 71.2 9e-21 gi|116060208|emb|CAL56267.1| Vacuolar H+-ATPase V1 sector, su... 71.2 1e-20 gi|81157947|dbj|BAE48224.1| V-type H+ ATPase subunit A [Chlorell 70.5 1e-20 gi|3334408|sp|Q38676|VATA1_ACEAT Vacuolar ATP synthase cataly... 68.2 7e-20 gi|2493120|sp|Q38677|VATA2_ACEAT Vacuolar ATP synthase cataly... 68.2 7e-20 gi|7592738|dbj|BAA94379.1| vacuolar H+-ATPase subunit A [Nepenth 75.5 2e-16 gi|6601482|gb|AAF18994.1|AF212304_1 vacuolar H+-ATPase catalytic 57.4 1e-08 gi|116059982|emb|CAL56041.1| Vacuolar H+-ATPase V1 sector, su... 35.8 0.046 gi|6715512|gb|AAF26445.1| vacuolar H+-ATPase B subunit [Nicotian 35.4 0.060 gi|118721470|dbj|BAF38479.1| vacuolar H+-ATPase subunit B [Zoste 34.3 0.13 gi|118429132|gb|ABK91686.1| vacuolar ATPase subunit B [Kalidium 34.3 0.13 gi|62321641|dbj|BAD95251.1| vacuolar-type H+-ATPase subunit B2 [ 34.3 0.13 gi|29424043|gb|AAO73463.1| vacuolar H(+)-ATPase subunit B [Suaed 34.3 0.13 gi|115439527|ref|NP_001044043.1| Os01g0711000 [Oryza sativa (... 34.3 0.13 gi|15010616|gb|AAK73967.1| AT4g38510/F20M13_70 [Arabidopsis t... 34.3 0.13 gi|166627|gb|AAC36485.1| nucleotide-binding subunit of vacuol... 34.3 0.13 gi|51969596|dbj|BAD43490.1| vacuolar-type H+-ATPase subunit B... 34.3 0.13 gi|51968480|dbj|BAD42932.1| vacuolar-type H+-ATPase subunit B... 34.3 0.13 gi|15222929|ref|NP_177729.1| ATP binding / hydrogen-exporting... 34.3 0.13 gi|2493130|sp|Q43433|VATB2_GOSHI Vacuolar ATP synthase subuni... 34.3 0.13 gi|115468606|ref|NP_001057902.1| Os06g0568200 [Oryza sativa (... 34.3 0.13 gi|2493129|sp|Q43432|VATB1_GOSHI Vacuolar ATP synthase subuni... 34.3 0.13 gi|25290419|pir||G96788 protein T4O12.24 [imported] - Arabido... 34.3 0.13 gi|2493127|sp|Q38681|VATB1_ACEAT Vacuolar ATP synthase subuni... 34.3 0.13 gi|15233891|ref|NP_195563.1| ATP binding / hydrogen-exporting... 34.3 0.13 gi|17065080|gb|AAL32694.1| Unknown protein [Arabidopsis thali... 34.3 0.13 gi|2493131|sp|Q40078|VATB1_HORVU Vacuolar ATP synthase subuni... 34.3 0.13 gi|26986106|emb|CAD27443.1| vacuolar ATPase subunit B [Mesembrya 34.3 0.13 gi|2493128|sp|Q38680|VATB2_ACEAT Vacuolar ATP synthase subuni... 34.3 0.13 gi|2493132|sp|Q40079|VATB2_HORVU Vacuolar ATP synthase subuni... 34.3 0.13 gi|4519264|dbj|BAA75517.1| vacuolar H+-ATPase B subunit [Citrus 33.9 0.17 gi|6721533|dbj|BAA89597.1| vacuolar H+-ATPase B subunit [Citrus 33.9 0.17 gi|110738557|dbj|BAF01204.1| membrane channel protein-like [Arab 30.0 2.5 gi|89257520|gb|ABD65010.1| tonoplast intrinsic protein, putative 30.0 2.5 gi|15238100|ref|NP_199556.1| AtTIP2;3; water channel [Arabido... 30.0 2.5 gi|53830845|gb|AAU95245.1| putative thaumatin-like protein [Sola 28.5 7.3 gi|89257632|gb|ABD65120.1| Tonoplast intrinsic protein, putative 28.5 7.3 gi|77556116|gb|ABA98912.1| transposon protein, putative, CACT... 28.5 7.3 gi|15236043|ref|NP_193465.1| DELTA-TIP2/TIP2;2; water channel... 28.5 7.3
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 234 Number of extensions: 5 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 403 Length of database: 101054579 Length adjustment: 100 Effective length of query: 303 Effective length of database: 72719679 Effective search space: 2472469086 Effective search space used: 2472469086 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 61 (28.1 bits)