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BLASTX 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman 
(1997), "Gapped BLAST and PSI-BLAST: a new generation of 
protein database search programs", Nucleic Acids Res. 25:3389-3402.

RID: 1168945734-5239-165722206174.BLASTQ1


Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
           4,458,890 sequences; 1,532,996,420 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Query=  Contig344
Length=570


Distribution of 46 Blast Hits on the Query Sequence



                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|30693911|ref|NP_850698.1|  unknown protein [Arabidopsis thalia   130    2e-30 UniGene infoGene info
gi|7629998|emb|CAB88340.1|  putative protein [Arabidopsis thalian   125    1e-28
gi|77999982|dbj|BAE46872.1|  Rhomboid family protein AtRBL1 [Arab   117    2e-26 UniGene info
gi|42569431|ref|NP_180469.3|  unknown protein [Arabidopsis tha...   117    2e-26 UniGene infoGene info
gi|115486807|ref|NP_001068547.1|  Os11g0704800 [Oryza sativa (...   109    8e-24 Gene info
gi|115450317|ref|NP_001048759.1|  Os03g0116400 [Oryza sativa (...   105    9e-23 Gene info
gi|3461845|gb|AAC33231.1|  hypothetical protein [Arabidopsis thal   105    1e-22
gi|115480259|ref|NP_001063723.1|  Os09g0525900 [Oryza sativa (...   100    4e-21 Gene info
gi|15221690|ref|NP_176500.1|  unknown protein [Arabidopsis tha...  99.4    8e-21 UniGene infoGene info
gi|294845|gb|AAA02747.1|  membrane protein [Saccharum hybrid cult  97.1    4e-20
gi|115434508|ref|NP_001042012.1|  Os01g0147300 [Oryza sativa (...  92.8    7e-19 Gene info
gi|15236387|ref|NP_194038.1|  unknown protein [Arabidopsis tha...  92.4    1e-18 UniGene infoGene info
gi|15240744|ref|NP_196342.1|  unknown protein [Arabidopsis tha...  91.3    2e-18 UniGene infoGene info
gi|115477653|ref|NP_001062422.1|  Os08g0546700 [Oryza sativa (...  89.7    6e-18 Gene info
gi|15222058|ref|NP_172735.1|  unknown protein [Arabidopsis tha...  88.2    2e-17 UniGene infoGene info
gi|9502383|gb|AAF88090.1|AC025417_18  T12C24.28 [Arabidopsis thal  88.2    2e-17
gi|92881546|gb|ABE86309.1|  Rhomboid-like protein [Medicago trunc  85.9    9e-17
gi|15219034|ref|NP_175667.1|  unknown protein [Arabidopsis tha...  85.5    1e-16 UniGene infoGene info
gi|92895902|gb|ABE92910.1|  Protein secE/sec61-gamma protein [Med  81.3    2e-15
gi|87162923|gb|ABD28718.1|  Rhomboid-like protein [Medicago trunc  81.3    2e-15
gi|116310009|emb|CAH67035.1|  OSIGBa0139P06.8 [Oryza sativa (indi  77.8    2e-14
gi|115459992|ref|NP_001053596.1|  Os04g0569300 [Oryza sativa (...  77.8    2e-14 Gene info
gi|15218144|ref|NP_177909.1|  KOM (KOMPEITO) [Arabidopsis thalian  68.9    1e-11 UniGene infoGene info
gi|22122915|gb|AAM92298.1|  putative membrane protein [Oryza s...  61.2    2e-09 Gene info
gi|115483002|ref|NP_001065094.1|  Os10g0521900 [Oryza sativa (...  59.3    9e-09 Gene info
gi|6573780|gb|AAF17700.1|AC009243_27  F28K19.7 [Arabidopsis thali  36.2    0.083
gi|20330771|gb|AAM19134.1|AC103891_14  Hypothetical protein [O...  33.9    0.41  Gene info
gi|21537324|gb|AAM61665.1|  leucoanthocyanidin dioxygenase-lik...  32.7    0.92  UniGene info
gi|15239179|ref|NP_196179.1|  iron ion binding / isopenicillin...  32.3    1.2   UniGene infoGene info
gi|116057495|emb|CAL51922.1|  40S ribosomal protein S17 (ISS) [Os  31.2    2.7  
gi|6103625|gb|AAF03693.1|  unknown [Picea rubens]                  31.2    2.7  
gi|115481984|ref|NP_001064585.1|  Os10g0411800 [Oryza sativa (...  30.4    4.6   Gene info
gi|51103313|gb|AAT96389.1|  centromeric histone [Olimarabidopsis   30.0    5.9  
gi|38346261|emb|CAE02083.2|  OSJNBa0074B10.11 [Oryza sativa (japo  30.0    5.9   Gene info
gi|15241986|ref|NP_198249.1|  cysteine-type peptidase/ peptidase   30.0    5.9   UniGene infoGene info
gi|600118|emb|CAA84230.1|  extensin-like protein [Zea mays] >g...  30.0    5.9  
gi|91178253|gb|ABE27633.1|  histone H3 [Arabidopsis lyrata sub...  29.6    7.8  
gi|40287504|gb|AAR83866.1|  40S ribosomal protein S17 [Capsicum a  29.6    7.8  
gi|76573345|gb|ABA46777.1|  40S ribosomal protein S17-like protei  29.6    7.8   UniGene info
gi|21593447|gb|AAM65414.1|  40S ribosomal protein S17-like [Arabi  29.6    7.8   UniGene info
gi|25295117|pir||B84466  40S ribosomal protein S17 [imported] - A  29.6    7.8  
gi|15238332|ref|NP_196100.1|  structural constituent of riboso...  29.6    7.8   UniGene infoGene info
gi|18395997|ref|NP_565320.1|  structural constituent of riboso...  29.6    7.8   UniGene infoGene info
gi|15228141|ref|NP_178520.1|  structural constituent of riboso...  29.6    7.8   UniGene infoGene info
gi|15228335|ref|NP_187672.1|  structural constituent of riboso...  29.6    7.8   UniGene infoGene info
gi|20141760|sp|P49215|RS17_LYCES  40S ribosomal protein S17 >g...  29.6    7.8   Gene info
Alignments
>gi|30693911|ref|NP_850698.1| UniGene infoGene info unknown protein [Arabidopsis thaliana] Length=394 Score = 130 bits (328), Expect = 2e-30 Identities = 71/144 (49%), Positives = 88/144 (61%), Gaps = 13/144 (9%) Frame = +1 Query 91 TRASSRRSSNLIHPVDVETPPV-------RTPSPIVYRE----IKHFKKWVPWLIPAFVV 237 TR R ++N I P+D+E+ T S Y E +K F+ W PWLIP FVV Sbjct 15 TRERERSNNNNIQPMDLESSSSVSGQQRSLTQSRSSYEERGRGVKEFRSWFPWLIPCFVV 74 Query 238 ANTVMLIITMYVNNCPKNSVSCIADFLGRFSFQPFKENPLLGPSSARCRRWGLFDVKESG 417 AN + +ITMYVNNCPK S C ADFLGRFSFQ +ENPLLGPSS + G DVK+ Sbjct 75 ANVAVFVITMYVNNCPKKSGDCFADFLGRFSFQNTRENPLLGPSSLTLQTMGGLDVKKV- 133 Query 418 LMDTKGWRLITCNWVTWRGXFHLL 489 + +GWRL++CNW+ G HLL Sbjct 134 VKGDEGWRLLSCNWL-HGGVVHLL 156 >gi|7629998|emb|CAB88340.1| putative protein [Arabidopsis thaliana] Length=361 Score = 125 bits (314), Expect = 1e-28 Identities = 60/103 (58%), Positives = 72/103 (69%), Gaps = 2/103 (1%) Frame = +1 Query 181 REIKHFKKWVPWLIPAFVVANTVMLIITMYVNNCPKNSVSCIADFLGRFSFQPFKENPLL 360 R +K F+ W PWLIP FVVAN + +ITMYVNNCPK S C ADFLGRFSFQ +ENPLL Sbjct 28 RGVKEFRSWFPWLIPCFVVANVAVFVITMYVNNCPKKSGDCFADFLGRFSFQNTRENPLL 87 Query 361 GPSSARCRRWGLFDVKESGLMDTKGWRLITCNWVTWRGXFHLL 489 GPSS + G DVK+ + +GWRL++CNW+ G HLL Sbjct 88 GPSSLTLQTMGGLDVKKV-VKGDEGWRLLSCNWL-HGGVVHLL 128 >gi|77999982|dbj|BAE46872.1| UniGene info Rhomboid family protein AtRBL1 [Arabidopsis thaliana] Length=346 Score = 117 bits (294), Expect = 2e-26 Identities = 61/125 (48%), Positives = 75/125 (60%), Gaps = 8/125 (6%) Frame = +1 Query 133 VDVETPPV------RTPSPIVYREIKHFKKWVPWLIPAFVVANTVMLIITMYVNNCPKNS 294 V VET P R + E + FK W PWL+PA VVAN + I+M++NNCPKNS Sbjct 24 VAVETSPATATRRRRQQQRASFAEFRPFKLWFPWLVPAIVVANIALFAISMFINNCPKNS 83 Query 295 VSCIADFLGRFSFQPFKENPLLGPSSARCRRWGLFDVKESGLMDTKGWRLITCNWVTWRG 474 C+A FLGRF+FQP KENPLLGPSS + G DV + + WRL TC W+ G Sbjct 84 AYCLARFLGRFAFQPMKENPLLGPSSLTLEKMGALDV-SMVVHKHEVWRLFTCIWL-HAG 141 Query 475 XFHLL 489 FH+L Sbjct 142 VFHVL 146 >gi|42569431|ref|NP_180469.3| UniGene infoGene info unknown protein [Arabidopsis thaliana] gi|110737035|dbj|BAF00472.1| Gene info hypothetical protein [Arabidopsis thaliana] Length=389 Score = 117 bits (294), Expect = 2e-26 Identities = 61/125 (48%), Positives = 75/125 (60%), Gaps = 8/125 (6%) Frame = +1 Query 133 VDVETPPV------RTPSPIVYREIKHFKKWVPWLIPAFVVANTVMLIITMYVNNCPKNS 294 V VET P R + E + FK W PWL+PA VVAN + I+M++NNCPKNS Sbjct 24 VAVETSPATATRRRRQQQRASFAEFRPFKLWFPWLVPAIVVANIALFAISMFINNCPKNS 83 Query 295 VSCIADFLGRFSFQPFKENPLLGPSSARCRRWGLFDVKESGLMDTKGWRLITCNWVTWRG 474 C+A FLGRF+FQP KENPLLGPSS + G DV + + WRL TC W+ G Sbjct 84 AYCLARFLGRFAFQPMKENPLLGPSSLTLEKMGALDV-SMVVHKHEVWRLFTCIWL-HAG 141 Query 475 XFHLL 489 FH+L Sbjct 142 VFHVL 146 >gi|115486807|ref|NP_001068547.1| Gene info Os11g0704800 [Oryza sativa (japonica cultivar-group)] gi|62733172|gb|AAX95289.1| Gene info Rhomboid family, putative [Oryza sativa (japonica cultivar-group)] gi|77552712|gb|ABA95509.1| Gene info rhomboid family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] gi|113645769|dbj|BAF28910.1| Gene info Os11g0704800 [Oryza sativa (japonica cultivar-group)] Length=374 Score = 109 bits (272), Expect = 8e-24 Identities = 54/115 (46%), Positives = 74/115 (64%), Gaps = 3/115 (2%) Frame = +1 Query 148 PPVRTPSPIVYREIKHFKKWVPWLIPAFVVANTVMLIITMYVNNCPK-NSVSCIADFLGR 324 PPV P R ++++W PW++ A ++ V+ +++MYVN+CP+ NS C A FLGR Sbjct 19 PPVHPHRPGSLRARPYYRRWTPWIVAAIALSCVVVFLVSMYVNDCPRRNSGDCAAGFLGR 78 Query 325 FSFQPFKENPLLGPSSARCRRWGLFDVKESGLMDTKGWRLITCNWVTWRGXFHLL 489 F+FQP KENPLLGPSSA + G DV + + +GWRLITC W+ G HLL Sbjct 79 FAFQPLKENPLLGPSSATLLKMGALDVTKV-VHGHQGWRLITCIWL-HAGVVHLL 131 >gi|115450317|ref|NP_001048759.1| Gene info Os03g0116400 [Oryza sativa (japonica cultivar-group)] gi|108705857|gb|ABF93652.1| Gene info membrane protein, putative, expressed [Oryza sativa (japonica cultivar-group)] gi|113547230|dbj|BAF10673.1| Gene info Os03g0116400 [Oryza sativa (japonica cultivar-group)] Length=325 Score = 105 bits (263), Expect = 9e-23 Identities = 55/115 (47%), Positives = 78/115 (67%), Gaps = 7/115 (6%) Frame = +1 Query 157 RTPSPIVYREIKHFKKWVPWLIPAFVVANTVMLIITMYVNNCPKN----SVSCIADFLGR 324 + PSP+ Y + + ++WVPW++P+F+VAN V+ ++TMY NNCP + S CIA FLGR Sbjct 19 KVPSPL-YPQHEGEREWVPWIVPSFLVANIVVFVLTMYANNCPLHTPPRSGKCIARFLGR 77 Query 325 FSFQPFKENPLLGPSSARCRRWGLFDVKESGLMDTKGWRLITCNWVTWRGXFHLL 489 FSFQP ENPLLGPSSA ++ G V + + + +G+RLIT W+ G HL+ Sbjct 78 FSFQPLHENPLLGPSSATLQKMGAL-VWDKVVHEHQGYRLITSIWL-HAGVLHLV 130 >gi|3461845|gb|AAC33231.1| hypothetical protein [Arabidopsis thaliana] Length=372 Score = 105 bits (262), Expect = 1e-22 Identities = 63/150 (42%), Positives = 78/150 (52%), Gaps = 32/150 (21%) Frame = +1 Query 133 VDVETPPV------RTPSPIVYREIKHFKKWVPWLIPAFVVANTVMLIITMYVNNCPKNS 294 V VET P R + E + FK W PWL+PA VVAN + I+M++NNCPKNS Sbjct 24 VAVETSPATATRRRRQQQRASFAEFRPFKLWFPWLVPAIVVANIALFAISMFINNCPKNS 83 Query 295 VSCIADFLGRFSFQPFKENPLLGPSSARC-----------------RRWGLFDVKES-GL 420 C+A FLGRF+FQP KENPLLGPSS R F++ E G Sbjct 84 AYCLARFLGRFAFQPMKENPLLGPSSLTWVTLKISTLFLKIPHLIEIRVSEFEILEKMGA 143 Query 421 MDT-------KGWRLITCNWVTWRGXFHLL 489 +D + WRL TC W+ G FH+L Sbjct 144 LDVSMVVHKHEVWRLFTCIWL-HAGVFHVL 172 >gi|115480259|ref|NP_001063723.1| Gene info Os09g0525900 [Oryza sativa (japonica cultivar-group)] gi|52076044|dbj|BAD46497.1| Gene info putative membrane protein [Oryza sativa (japonica cultivar-group)] gi|52077312|dbj|BAD46353.1| Gene info putative membrane protein [Oryza sativa (japonica cultivar-group)] gi|113631956|dbj|BAF25637.1| Gene info Os09g0525900 [Oryza sativa (japonica cultivar-group)] Length=323 Score = 100 bits (249), Expect = 4e-21 Identities = 49/100 (49%), Positives = 66/100 (66%), Gaps = 5/100 (5%) Frame = +1 Query 199 KKWVPWLIPAFVVANTVMLIITMYVNNCPKNSVS---CIADFLGRFSFQPFKENPLLGPS 369 +KW PWL+P +VA + I+ MYVNNCPK+ + C+A FL RFSFQP +ENPLLGPS Sbjct 32 RKWWPWLVPTVIVACIAVFIVEMYVNNCPKHGSALGGCVAGFLRRFSFQPLRENPLLGPS 91 Query 370 SARCRRWGLFDVKESGLMDTKGWRLITCNWVTWRGXFHLL 489 SA ++ G D + + +GWRLI+C W+ G HL+ Sbjct 92 SATLQKMGALDWNKV-VHQHQGWRLISCIWL-HAGLIHLV 129 >gi|15221690|ref|NP_176500.1| UniGene infoGene info unknown protein [Arabidopsis thaliana] gi|12323258|gb|AAG51610.1|AC010795_14 Gene info membrane protein, putative; 61952-60281 [Arabidopsis thaliana] gi|28393358|gb|AAO42103.1| UniGene infoGene info putative membrane protein [Arabidopsis thaliana] gi|28827620|gb|AAO50654.1| UniGene infoGene info putative membrane protein [Arabidopsis thaliana] gi|77999980|dbj|BAE46871.1| UniGene infoGene info Rhomboid family protein AtRBL2 [Arabidopsis thaliana] Length=317 Score = 99.4 bits (246), Expect = 8e-21 Identities = 50/108 (46%), Positives = 66/108 (61%), Gaps = 6/108 (5%) Frame = +1 Query 178 YREIKHFKKWVPWLIPAFVVANTVMLIITMYVNNCPKN----SVSCIADFLGRFSFQPFK 345 Y E W WLIPA VVAN + I M+VN+CPK + C+A FLGRFSFQP K Sbjct 22 YEESSGETHWTSWLIPAIVVANLAVFIAVMFVNDCPKKITGPNKECVARFLGRFSFQPLK 81 Query 346 ENPLLGPSSARCRRWGLFDVKESGLMDTKGWRLITCNWVTWRGXFHLL 489 ENPL GPSS+ + G + ++ + + +GWRL++C W+ G HLL Sbjct 82 ENPLFGPSSSTLEKMGALEWRKV-VHEHQGWRLLSCMWL-HAGIIHLL 127 >gi|294845|gb|AAA02747.1| membrane protein [Saccharum hybrid cultivar H65-7052] Length=325 Score = 97.1 bits (240), Expect = 4e-20 Identities = 47/100 (47%), Positives = 63/100 (63%), Gaps = 5/100 (5%) Frame = +1 Query 199 KKWVPWLIPAFVVANTVMLIITMYVNNCPKNSVS---CIADFLGRFSFQPFKENPLLGPS 369 +KW PWL+P +VA + ++ MY NNCPK+ C+A FL RFSFQP +ENPLLGPS Sbjct 34 RKWWPWLVPTVIVACIAVFVVEMYENNCPKHGSQLGGCVAGFLRRFSFQPLRENPLLGPS 93 Query 370 SARCRRWGLFDVKESGLMDTKGWRLITCNWVTWRGXFHLL 489 S+ + G D + D +GWRLI+C W+ G HL+ Sbjct 94 SSTLEKMGALDWNKIVHQD-QGWRLISCIWL-HAGLIHLV 131 >gi|115434508|ref|NP_001042012.1| Gene info Os01g0147300 [Oryza sativa (japonica cultivar-group)] gi|54290319|dbj|BAD61123.1| Gene info putative membrane protein [Oryza sativa (japonica cultivar-group)] gi|54290396|dbj|BAD61266.1| Gene info putative membrane protein [Oryza sativa (japonica cultivar-group)] gi|113531543|dbj|BAF03926.1| Gene info Os01g0147300 [Oryza sativa (japonica cultivar-group)] Length=329 Score = 92.8 bits (229), Expect = 7e-19 Identities = 51/132 (38%), Positives = 72/132 (54%), Gaps = 23/132 (17%) Frame = +1 Query 148 PPVRTPSPIVYREIKHFKKWVPWLIPAFVVANTVMLIITMYVNNCPKN------------ 291 PP P P E + F++W P+L+P FVV N + ++TMY+N+CP + Sbjct 53 PPPPPPPP---SEFRPFRRWFPFLVPFFVVVNVALFVVTMYINDCPAHMQATGDAIGGDV 109 Query 292 -----SVSC-IADFLGRFSFQPFKENPLLGPSSARCRRWGLFDVKESGLMDTKGWRLITC 453 S C + LGRF+FQ +KENPL+GPSSA + G + + D +GWRLITC Sbjct 110 GEGAASQGCWLEPELGRFAFQSYKENPLIGPSSATLLKMGALETSKV-TNDHEGWRLITC 168 Query 454 NWVTWRGXFHLL 489 W+ G H+L Sbjct 169 IWL-HAGVVHIL 179 >gi|15236387|ref|NP_194038.1| UniGene infoGene info unknown protein [Arabidopsis thaliana] gi|3292833|emb|CAA19823.1| Gene info putative membrane protein [Arabidopsis thaliana] gi|7269154|emb|CAB79262.1| Gene info putative membrane protein [Arabidopsis thaliana] Length=313 Score = 92.4 bits (228), Expect = 1e-18 Identities = 44/96 (45%), Positives = 60/96 (62%), Gaps = 2/96 (2%) Frame = +1 Query 202 KWVPWLIPAFVVANTVMLIITMYVNNCPKNSVSCIADFLGRFSFQPFKENPLLGPSSARC 381 +W W+IP V+AN V+ ++ MY N+CP S C+A FLGRFSF+ FK NPLLGPSS+ Sbjct 28 QWRSWIIPIVVIANVVVFVVVMYYNDCPHKSHRCLAKFLGRFSFESFKSNPLLGPSSSTL 87 Query 382 RRWGLFDVKESGLMDTKGWRLITCNWVTWRGXFHLL 489 + G + + + WRL+TC W+ G HLL Sbjct 88 EKMGALAWGKI-VHKRQVWRLLTCMWL-HAGVIHLL 121 >gi|15240744|ref|NP_196342.1| UniGene infoGene info unknown protein [Arabidopsis thaliana] gi|7546703|emb|CAB87281.1| Gene info membrane protein [Arabidopsis thaliana] gi|16648762|gb|AAL25572.1| UniGene infoGene info AT5g07250/T28J14_190 [Arabidopsis thaliana] gi|20466143|gb|AAM19993.1| UniGene infoGene info AT5g07250/T28J14_190 [Arabidopsis thaliana] Length=346 Score = 91.3 bits (225), Expect = 2e-18 Identities = 46/118 (38%), Positives = 65/118 (55%), Gaps = 8/118 (6%) Frame = +1 Query 151 PVRTPSPIVYREIKHFKKWVPWLIPAFVVANTVMLIITMYVNNCPKNSVS------CIAD 312 PV S + + +W WL+P FVVAN + ++ M+VNNCP + S C+A Sbjct 35 PVALSSSTEFGDNALSSRWTSWLVPMFVVANVAVFVVAMFVNNCPNHFESHRLRGHCVAK 94 Query 313 FLGRFSFQPFKENPLLGPSSARCRRWGLFDVKESGLMDTKGWRLITCNWVTWRGXFHL 486 FLGR SF+P + NPL GPSS + G + + + +GWRL+TC W+ G HL Sbjct 95 FLGRLSFEPLRTNPLFGPSSHTLEKLGALEWSKV-VEKKEGWRLLTCIWL-HAGVIHL 150 >gi|115477653|ref|NP_001062422.1| Gene info Os08g0546700 [Oryza sativa (japonica cultivar-group)] gi|42408095|dbj|BAD09236.1| Gene info putative membrane protein [Oryza sativa (japonica cultivar-group)] gi|113624391|dbj|BAF24336.1| Gene info Os08g0546700 [Oryza sativa (japonica cultivar-group)] Length=323 Score = 89.7 bits (221), Expect = 6e-18 Identities = 43/102 (42%), Positives = 65/102 (63%), Gaps = 7/102 (6%) Frame = +1 Query 199 KKWVPWLIPAFVVANTVMLIITMYVNNCPKNSV-----SCIADFLGRFSFQPFKENPLLG 363 ++W PWL+P +VA V+ ++ M+VN+CP++ SC+A FL +F+FQP +ENPLLG Sbjct 30 RRWWPWLVPTVLVACIVVFLVEMFVNDCPRHGSPLRGESCVAGFLHQFAFQPLRENPLLG 89 Query 364 PSSARCRRWGLFDVKESGLMDTKGWRLITCNWVTWRGXFHLL 489 PSSA + G D + + + WRLI+C W+ G HL+ Sbjct 90 PSSATLEKMGALDWAKV-VHQHQAWRLISCIWL-HAGLIHLI 129 >gi|15222058|ref|NP_172735.1| UniGene infoGene info unknown protein [Arabidopsis thaliana] gi|17529034|gb|AAL38727.1| UniGene infoGene info putative membrane protein [Arabidopsis thaliana] gi|20259083|gb|AAM14257.1| UniGene infoGene info putative membrane protein [Arabidopsis thaliana] Length=307 Score = 88.2 bits (217), Expect = 2e-17 Identities = 44/100 (44%), Positives = 58/100 (58%), Gaps = 6/100 (6%) Frame = +1 Query 202 KWVPWLIPAFVVANTVMLIITMYVNNCPKNSVS----CIADFLGRFSFQPFKENPLLGPS 369 +W WL P VVAN + I+ MY N+CPK + C+A L RFSFQP +ENP LGPS Sbjct 17 QWTAWLTPTIVVANVSIFIVVMYTNDCPKTTTGANGDCVAKLLRRFSFQPLRENPFLGPS 76 Query 370 SARCRRWGLFDVKESGLMDTKGWRLITCNWVTWRGXFHLL 489 S+ + G D K+ + + WRLIT W+ G HL+ Sbjct 77 SSTLEKLGALDWKKV-VQGNEKWRLITAMWL-HAGIIHLV 114 >gi|9502383|gb|AAF88090.1|AC025417_18 T12C24.28 [Arabidopsis thaliana] Length=302 Score = 88.2 bits (217), Expect = 2e-17 Identities = 44/100 (44%), Positives = 58/100 (58%), Gaps = 6/100 (6%) Frame = +1 Query 202 KWVPWLIPAFVVANTVMLIITMYVNNCPKNSVS----CIADFLGRFSFQPFKENPLLGPS 369 +W WL P VVAN + I+ MY N+CPK + C+A L RFSFQP +ENP LGPS Sbjct 12 QWTAWLTPTIVVANVSIFIVVMYTNDCPKTTTGANGDCVAKLLRRFSFQPLRENPFLGPS 71 Query 370 SARCRRWGLFDVKESGLMDTKGWRLITCNWVTWRGXFHLL 489 S+ + G D K+ + + WRLIT W+ G HL+ Sbjct 72 SSTLEKLGALDWKKV-VQGNEKWRLITAMWL-HAGIIHLV 109 >gi|92881546|gb|ABE86309.1| Rhomboid-like protein [Medicago truncatula] Length=314 Score = 85.9 bits (211), Expect = 9e-17 Identities = 52/125 (41%), Positives = 68/125 (54%), Gaps = 10/125 (8%) Frame = +1 Query 136 DVETPPVRTPSPIVYREIKHFKKWVPWLIPAFVVANTVMLIITMYVNNCP-------KNS 294 DVE+ + VY H ++ WL+PAFV N V+ I+ M +NNCP K+ Sbjct 6 DVESGRTKNNCSYVYVAETH-RESCSWLVPAFVFVNIVVFIVVMGINNCPNTTFGFHKHH 64 Query 295 VSCIADFLGRFSFQPFKENPLLGPSSARCRRWGLFDVKESGLMDTKGWRLITCNWVTWRG 474 C+A FL RFSFQPF+ENPLLGPSS + G + + + WRL TC W+ G Sbjct 65 HHCVARFLHRFSFQPFRENPLLGPSSLTLIKMGALR-WVNVVHQHQEWRLFTCIWL-HAG 122 Query 475 XFHLL 489 HLL Sbjct 123 IIHLL 127 >gi|15219034|ref|NP_175667.1| UniGene infoGene info unknown protein [Arabidopsis thaliana] gi|5903047|gb|AAD55606.1|AC008016_16 Gene info F6D8.20 [Arabidopsis thaliana] Length=309 Score = 85.5 bits (210), Expect = 1e-16 Identities = 51/126 (40%), Positives = 66/126 (52%), Gaps = 16/126 (12%) Frame = +1 Query 130 PVDVETPPVRTPSPIVYREIKHFKK-----WVPWLIPAFVVANTVMLIITMYVNNCPKNS 294 P D+E P P HF+ WV WL+P + AN V TMYVN+CP S Sbjct 8 PPDIENGPPPPARP-------HFRPPIPVPWVAWLVPLILAANFVTFATTMYVNDCPARS 60 Query 295 VSCIA-DFLGRFSFQPFKENPLLGPSSARCRRWGLFDVKESGLMDTKGWRLITCNWVTWR 471 C+ D LGR SFQP KEN LLGPS R+ G + + + + + WRLI+C W+ Sbjct 61 DECLLFDVLGRLSFQPIKENMLLGPSIPTLRKLGALERRL--VEEGERWRLISCIWL-HG 117 Query 472 GXFHLL 489 G HL+ Sbjct 118 GFLHLM 123 >gi|92895902|gb|ABE92910.1| Protein secE/sec61-gamma protein [Medicago truncatula] Length=324 Score = 81.3 bits (199), Expect = 2e-15 Identities = 42/99 (42%), Positives = 60/99 (60%), Gaps = 5/99 (5%) Frame = +1 Query 202 KWVPWLIPAFVVANTVMLIITMYVNNCP--KNSVSCI-ADFLGRFSFQPFKENPLLGPSS 372 +W WL+P F +AN M + +MY+N+CP N C+ +LG+FSFQPF ENPLLGPS Sbjct 30 QWFSWLVPLFFLANIAMFVYSMYINDCPGYLNEDDCLWYQYLGKFSFQPFNENPLLGPSV 89 Query 373 ARCRRWGLFDVKESGLMDTKGWRLITCNWVTWRGXFHLL 489 R G + ++ + + + WR ITC ++ G HLL Sbjct 90 RTLRVLGALE-RDLVVGENEVWRFITCMFL-HAGVIHLL 126 >gi|87162923|gb|ABD28718.1| Rhomboid-like protein [Medicago truncatula] Length=316 Score = 81.3 bits (199), Expect = 2e-15 Identities = 42/99 (42%), Positives = 60/99 (60%), Gaps = 5/99 (5%) Frame = +1 Query 202 KWVPWLIPAFVVANTVMLIITMYVNNCP--KNSVSCI-ADFLGRFSFQPFKENPLLGPSS 372 +W WL+P F +AN M + +MY+N+CP N C+ +LG+FSFQPF ENPLLGPS Sbjct 30 QWFSWLVPLFFLANIAMFVYSMYINDCPGYLNEDDCLWYQYLGKFSFQPFNENPLLGPSV 89 Query 373 ARCRRWGLFDVKESGLMDTKGWRLITCNWVTWRGXFHLL 489 R G + ++ + + + WR ITC ++ G HLL Sbjct 90 RTLRVLGALE-RDLVVGENEVWRFITCMFL-HAGVIHLL 126 >gi|116310009|emb|CAH67035.1| OSIGBa0139P06.8 [Oryza sativa (indica cultivar-group)] Length=342 Score = 77.8 bits (190), Expect = 2e-14 Identities = 40/94 (42%), Positives = 54/94 (57%), Gaps = 5/94 (5%) Frame = +1 Query 214 WLIPAFVVANTVMLIITMYVNNCPKNSV--SCIA-DFLGRFSFQPFKENPLLGPSSARCR 384 W++P V+AN M ++ MY NNCP N C+ FL R SFQP +ENP+LGPS+A R Sbjct 60 WVVPLVVIANVAMFVVVMYYNNCPANGGRRDCVGRSFLRRLSFQPLRENPVLGPSAATLR 119 Query 385 RWGLFDVKESGLMDTKGWRLITCNWVTWRGXFHL 486 ++G D + + WRL T W+ G HL Sbjct 120 KYGALD-WYGVVHGNQAWRLETSTWL-HAGLIHL 151 >gi|115459992|ref|NP_001053596.1| Gene info Os04g0569300 [Oryza sativa (japonica cultivar-group)] gi|38344377|emb|CAE02252.2| Gene info OSJNBb0032E06.11 [Oryza sativa (japonica cultivar-group)] gi|113565167|dbj|BAF15510.1| Gene info Os04g0569300 [Oryza sativa (japonica cultivar-group)] Length=342 Score = 77.8 bits (190), Expect = 2e-14 Identities = 40/94 (42%), Positives = 54/94 (57%), Gaps = 5/94 (5%) Frame = +1 Query 214 WLIPAFVVANTVMLIITMYVNNCPKNSV--SCIA-DFLGRFSFQPFKENPLLGPSSARCR 384 W++P V+AN M ++ MY NNCP N C+ FL R SFQP +ENP+LGPS+A R Sbjct 60 WVVPLVVIANVAMFVVVMYYNNCPANGGRRDCVGRSFLRRLSFQPLRENPVLGPSAATLR 119 Query 385 RWGLFDVKESGLMDTKGWRLITCNWVTWRGXFHL 486 ++G D + + WRL T W+ G HL Sbjct 120 KYGALD-WYGVVHGNQAWRLETSTWL-HAGLIHL 151 >gi|15218144|ref|NP_177909.1| UniGene infoGene info KOM (KOMPEITO) [Arabidopsis thaliana] Length=319 Score = 68.9 bits (167), Expect = 1e-11 Identities = 44/139 (31%), Positives = 68/139 (48%), Gaps = 6/139 (4%) Frame = +1 Query 82 QIPTRASSRRSSNLIHPVDVETPPVRTPSPIVYREIKHFKKWVP---WLIPAFVVANTVM 252 ++PT + + + + H + T S +H + + WL+ FV+ V+ Sbjct 2 EVPTESKTTQIDEISHNLSFTTSNAGDSSWDKISFFRHRSRQIKRDTWLVSVFVLLQIVL 61 Query 253 LIITMYVNNCPKNSVS-CIADFLGRFSFQPFKENPLLGPSSARCRRWGLFDVKESGLMDT 429 +TM VN+C NS C A LGRFSFQ ENP+LGPS++ G K + + Sbjct 62 FAVTMGVNDCSGNSHGHCSAKLLGRFSFQSLSENPMLGPSASTLEHMGGLSWK-ALTENH 120 Query 430 KGWRLITCNWVTWRGXFHL 486 + WR++T W+ G FHL Sbjct 121 EIWRILTSPWL-HSGLFHL 138 >gi|22122915|gb|AAM92298.1| Gene info putative membrane protein [Oryza sativa (japonica cultivar-group)] Length=329 Score = 61.2 bits (147), Expect = 2e-09 Identities = 39/108 (36%), Positives = 57/108 (52%), Gaps = 24/108 (22%) Frame = +1 Query 199 KKWVPWLIPAFVVANTVMLIITMYVNNCPKNSV---SCIADFLGRFSFQPFKENPLLGPS 369 ++WVPWL+PA +VAN V+ + MYVNNCP ++ +C+ P PLL P+ Sbjct 40 REWVPWLVPAILVANVVVFAVAMYVNNCPSHASRGGACV-------RIPP----PLLLPA 88 Query 370 SAR--------CRRWGLFDVKESGLMDTKGWRLITCNWVTWRGXFHLL 489 S R + G V + + + +GWRL+TC W+ G HLL Sbjct 89 SLREPAPRPLLRHKMGAL-VWDKVVHEHQGWRLVTCIWL-HAGVVHLL 134 >gi|115483002|ref|NP_001065094.1| Gene info Os10g0521900 [Oryza sativa (japonica cultivar-group)] gi|113639703|dbj|BAF27008.1| Gene info Os10g0521900 [Oryza sativa (japonica cultivar-group)] Length=338 Score = 59.3 bits (142), Expect = 9e-09 Identities = 31/59 (52%), Positives = 39/59 (66%), Gaps = 2/59 (3%) Frame = +1 Query 313 FLGRFSFQPFKENPLLGPSSARCRRWGLFDVKESGLMDTKGWRLITCNWVTWRGXFHLL 489 FL RFSFQP ENPLLGPSSA ++ G V + + + +GWRL+TC W+ G HLL Sbjct 87 FLRRFSFQPLSENPLLGPSSATLQKMGAL-VWDKVVHEHQGWRLVTCIWL-HAGVVHLL 143 >gi|6573780|gb|AAF17700.1|AC009243_27 F28K19.7 [Arabidopsis thaliana] Length=735 Score = 36.2 bits (82), Expect = 0.083 Identities = 34/142 (23%), Positives = 60/142 (42%), Gaps = 19/142 (13%) Frame = +1 Query 82 QIPTRASSRRSSNLIHPVDVETPPVRTPSPIVYREIKHFKKWVP---WLIPAFVVANTVM 252 ++PT + + + + H + T S +H + + WL+ FV+ V+ Sbjct 2 EVPTESKTTQIDEISHNLSFTTSNAGDSSWDKISFFRHRSRQIKRDTWLVSVFVLLQIVL 61 Query 253 LIITMYVNNCPKNS-VSCIADF--LGRFSFQPFKENPLLGPSSARCRRWGLFDVKESGLM 423 +TM VN+C NS VS I +F + S + +N R + + L Sbjct 62 FAVTMGVNDCSGNSHVSKIDEFQLIHSVSISDYSDN-----------RQHMGGLSWKALT 110 Query 424 DT-KGWRLITCNWVTWRGXFHL 486 + + WR++T W+ G FHL Sbjct 111 ENHEIWRILTSPWL-HSGLFHL 131 >gi|20330771|gb|AAM19134.1|AC103891_14 Gene info Hypothetical protein [Oryza sativa (japonica cultivar-group)] gi|108707013|gb|ABF94808.1| hypothetical protein LOC_Os03g13020 [Oryza sativa (japonica cultivar-group)] Length=253 Score = 33.9 bits (76), Expect = 0.41 Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 1/48 (2%) Frame = -3 Query 442 DAIPWCPSTHFLLHQRAPIFCSVRKKDPEGDS-P*RVERRTGLRNQQC 302 + +P+CP+T + L QRA F KK PE D+ P V+ R G+ C Sbjct 99 ERLPFCPTTGWTLFQRASRFGRCSKKCPEVDAVPKHVQARFGVPMPPC 146 >gi|21537324|gb|AAM61665.1| UniGene info leucoanthocyanidin dioxygenase-like protein [Arabidopsis thaliana] Length=355 Score = 32.7 bits (73), Expect = 0.92 Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 4/61 (6%) Frame = +1 Query 304 IADFLGRFSFQPFKENPLLGPSSARCRRWGLFDVKESGLMDTKGWRLITCNWVTWRGXFH 483 I D G FS + ++ ++ S CR WG F V G+ L+ WR FH Sbjct 48 IIDLEGLFSEEGLSDDVIMARISEACRGWGFFQVVNHGVKP----ELMDAARXNWREFFH 103 Query 484 L 486 + Sbjct 104 M 104 >gi|15239179|ref|NP_196179.1| UniGene infoGene info iron ion binding / isopenicillin-N synthase [Arabidopsis thaliana] gi|10178137|dbj|BAB11549.1| Gene info leucoanthocyanidin dioxygenase-like protein [Arabidopsis thaliana] gi|14532538|gb|AAK63997.1| UniGene infoGene info AT5g05600/MOP10_14 [Arabidopsis thaliana] gi|22137300|gb|AAM91495.1| UniGene infoGene info AT5g05600/MOP10_14 [Arabidopsis thaliana] Length=371 Score = 32.3 bits (72), Expect = 1.2 Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 4/61 (6%) Frame = +1 Query 304 IADFLGRFSFQPFKENPLLGPSSARCRRWGLFDVKESGLMDTKGWRLITCNWVTWRGXFH 483 I D G FS + ++ ++ S CR WG F V G+ L+ WR FH Sbjct 64 IIDLEGLFSEEGLSDDVIMARISEACRGWGFFQVVNHGVKP----ELMDAARENWREFFH 119 Query 484 L 486 + Sbjct 120 M 120 >gi|116057495|emb|CAL51922.1| 40S ribosomal protein S17 (ISS) [Ostreococcus tauri] Length=134 Score = 31.2 bits (69), Expect = 2.7 Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 7/72 (9%) Frame = -2 Query 389 HLLQRAEEGPRRGFSLKG*KENR-------PKKSAMQETEFLGQLFTYMVMMSMTVLATT 231 HL++R + GP RG SLK +E R P+KSA+ T ++ SM + + Sbjct 56 HLMKRIQRGPVRGISLKLQEEERERRMDFVPEKSALDVDSIEVDRDTMDMLKSMNMGSLP 115 Query 230 KAGINQGTHFLK 195 ++ +H+ K Sbjct 116 GVTVSSRSHYNK 127 >gi|6103625|gb|AAF03693.1| unknown [Picea rubens] Length=165 Score = 31.2 bits (69), Expect = 2.7 Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 0/41 (0%) Frame = +1 Query 52 SASMATDPSPQIPTRASSRRSSNLIHPVDVETPPVRTPSPI 174 SAS P+ PT ++ ++ P TPPV TP P+ Sbjct 27 SASPTKSPTTPAPTTTAAPPTTTAAPPTTTATPPVSTPPPV 67 >gi|115481984|ref|NP_001064585.1| Gene info Os10g0411800 [Oryza sativa (japonica cultivar-group)] gi|31432043|gb|AAP53735.1| Gene info 40S ribosomal protein S17-4, putative, expressed [Oryza sativa (japonica cultivar-group)] gi|113639194|dbj|BAF26499.1| Gene info Os10g0411800 [Oryza sativa (japonica cultivar-group)] Length=141 Score = 30.4 bits (67), Expect = 4.6 Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 7/40 (17%) Frame = -2 Query 389 HLLQRAEEGPRRGFSLKG*KENR-------PKKSAMQETE 291 HL++R + GP RG SLK +E R P+KSA++ E Sbjct 56 HLMRRIQRGPVRGISLKLQEEERERRMDFVPEKSALEVEE 95 >gi|51103313|gb|AAT96389.1| centromeric histone [Olimarabidopsis pumila] Length=174 Score = 30.0 bits (66), Expect = 5.9 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Frame = +1 Query 55 ASMATDPSPQIPTRASSR-RSSNLIHPVDVETPPVR-TPSPIVYREIKHFKKWVPWLIPA 228 A+ T P+ T ++ R + + P + P R P + REI+HF+K +LIPA Sbjct 40 AAQQTTPTTSPATGSTKRAKRARQAMPRGSQKKPYRYKPGTVALREIRHFQKTTSFLIPA 99 >gi|38346261|emb|CAE02083.2| Gene info OSJNBa0074B10.11 [Oryza sativa (japonica cultivar-group)] Length=1243 Score = 30.0 bits (66), Expect = 5.9 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 13/54 (24%) Frame = +1 Query 100 SSRRSSNLIHPVDVETPPVRTPSPIV----------YREIKHFKKWVPWLIPAF 231 S RRSS+ PV +PPVRTPSP++ R + + W P AF Sbjct 1160 SLRRSSS---PVAAVSPPVRTPSPLLSFPDSPCVAAARARRRLRSWPPSAAAAF 1210 >gi|15241986|ref|NP_198249.1| UniGene infoGene info cysteine-type peptidase/ peptidase [Arabidopsis thaliana] Length=1172 Score = 30.0 bits (66), Expect = 5.9 Identities = 28/111 (25%), Positives = 47/111 (42%), Gaps = 22/111 (19%) Frame = +1 Query 40 FLKFSASMATDPSPQIPTRASSRRSSNLIHPV--------DVE------------TPPVR 159 F+ F +S S ++PT++ + + + H + D+E +PP+ Sbjct 299 FVPFVSSSKRKKSLEVPTQSQASENPSHSHTMSDEQNEDFDIEHLSEQKDDSWDVSPPLS 358 Query 160 TPSPIVYREIKHFKKWVPWLIPAFVVANTVMLIITMYVNNCPKNSVSCIAD 312 PS IV+ + FKK+ I + NTV+ M VN+ P S D Sbjct 359 HPSMIVHDD--EFKKFQDESIDRTTLTNTVITDDPMDVNHTPHESQDSYKD 407 >gi|600118|emb|CAA84230.1| extensin-like protein [Zea mays] gi|1096557|prf||2111476A extensin-like domain Length=1188 Score = 30.0 bits (66), Expect = 5.9 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 6/42 (14%) Frame = +1 Query 64 ATDPSPQIPTRASSRRSSNLIH------PVDVETPPVRTPSP 171 AT PSPQ+ A+S +L+ PV PPV+T SP Sbjct 484 ATSPSPQVQPPAASTPPPSLVKLSPPQAPVGSPPPPVKTTSP 525 >gi|91178253|gb|ABE27633.1| histone H3 [Arabidopsis lyrata subsp. petraea] gi|91178257|gb|ABE27635.1| histone H3 [Arabidopsis lyrata subsp. petraea] gi|91178283|gb|ABE27648.1| histone H3 [Arabidopsis lyrata subsp. petraea] gi|91178285|gb|ABE27649.1| histone H3 [Arabidopsis lyrata subsp. petraea] gi|91178301|gb|ABE27657.1| histone H3 [Arabidopsis lyrata subsp. petraea] gi|91178303|gb|ABE27658.1| histone H3 [Arabidopsis lyrata subsp. petraea] Length=176 Score = 29.6 bits (65), Expect = 7.8 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Frame = +1 Query 67 TDPSPQIPTRASSRRSSNLIHPVDVETPPVR-TPSPIVYREIKHFKKWVPWLIPA 228 T+P+ T R + P + P R P + REI+HF+K LIPA Sbjct 47 TNPTTSPATGGRRPRRARQAMPRGSQNKPYRYKPGTVALREIRHFQKQTNLLIPA 101 >gi|40287504|gb|AAR83866.1| 40S ribosomal protein S17 [Capsicum annuum] Length=145 Score = 29.6 bits (65), Expect = 7.8 Identities = 13/28 (46%), Positives = 20/28 (71%), Gaps = 0/28 (0%) Frame = -2 Query 395 SPHLLQRAEEGPRRGFSLKG*KENRPKK 312 S HL++R ++GP RG SLK +E R ++ Sbjct 54 STHLMKRIQKGPVRGISLKLQEEERERR 81 >gi|76573345|gb|ABA46777.1| UniGene info 40S ribosomal protein S17-like protein [Solanum tuberosum] Length=144 Score = 29.6 bits (65), Expect = 7.8 Identities = 13/28 (46%), Positives = 20/28 (71%), Gaps = 0/28 (0%) Frame = -2 Query 395 SPHLLQRAEEGPRRGFSLKG*KENRPKK 312 S HL++R ++GP RG SLK +E R ++ Sbjct 54 STHLMKRIQKGPVRGISLKLQEEERERR 81 >gi|21593447|gb|AAM65414.1| UniGene info 40S ribosomal protein S17-like [Arabidopsis thaliana] Length=141 Score = 29.6 bits (65), Expect = 7.8 Identities = 13/28 (46%), Positives = 20/28 (71%), Gaps = 0/28 (0%) Frame = -2 Query 395 SPHLLQRAEEGPRRGFSLKG*KENRPKK 312 S HL++R ++GP RG SLK +E R ++ Sbjct 54 STHLMKRIQKGPVRGISLKLQEEERERR 81 >gi|25295117|pir||B84466 40S ribosomal protein S17 [imported] - Arabidopsis thaliana Length=179 Score = 29.6 bits (65), Expect = 7.8 Identities = 13/28 (46%), Positives = 20/28 (71%), Gaps = 0/28 (0%) Frame = -2 Query 395 SPHLLQRAEEGPRRGFSLKG*KENRPKK 312 S HL++R ++GP RG SLK +E R ++ Sbjct 93 STHLMKRIQKGPVRGISLKLQEEERERR 120 >gi|15238332|ref|NP_196100.1| UniGene infoGene info structural constituent of ribosome [Arabidopsis thaliana] gi|30680641|ref|NP_850765.1| UniGene infoGene info structural constituent of ribosome [Arabidopsis thaliana] gi|79326979|ref|NP_001031834.1| UniGene infoGene info structural constituent of ribosome [Arabidopsis thaliana] gi|79326995|ref|NP_001031835.1| UniGene infoGene info structural constituent of ribosome [Arabidopsis thaliana] gi|20139799|sp|Q9LZ17|RS17D_ARATH Gene info 40S ribosomal protein S17-4 gi|13605724|gb|AAK32855.1|AF361843_1 UniGene infoGene info AT5g04800/MUK11_12 [Arabidopsis thaliana] gi|7413542|emb|CAB86022.1| Gene info 40S ribosomal protein S17-like [Arabidopsis thaliana] gi|9758455|dbj|BAB08984.1| Gene info 40S ribosomal protein S17 [Arabidopsis thaliana] gi|23507769|gb|AAN38688.1| UniGene infoGene info At5g04800/MUK11_12 [Arabidopsis thaliana] Length=141 Score = 29.6 bits (65), Expect = 7.8 Identities = 13/28 (46%), Positives = 20/28 (71%), Gaps = 0/28 (0%) Frame = -2 Query 395 SPHLLQRAEEGPRRGFSLKG*KENRPKK 312 S HL++R ++GP RG SLK +E R ++ Sbjct 54 STHLMKRIQKGPVRGISLKLQEEERERR 81 >gi|18395997|ref|NP_565320.1| UniGene infoGene info structural constituent of ribosome [Arabidopsis thaliana] gi|79321790|ref|NP_001031325.1| UniGene infoGene info structural constituent of ribosome [Arabidopsis thaliana] gi|20139841|sp|Q9SJ36|RS17B_ARATH Gene info 40S ribosomal protein S17-2 gi|13878099|gb|AAK44127.1|AF370312_1 UniGene infoGene info putative 40S ribosomal protein S17 [Arabidopsis thaliana] gi|17104767|gb|AAL34272.1| UniGene infoGene info putative 40S ribosomal protein S17 [Arabidopsis thaliana] gi|20198002|gb|AAD29060.2| Gene info 40S ribosomal protein S17 [Arabidopsis thaliana] gi|25083446|gb|AAN72079.1| UniGene infoGene info 40S ribosomal protein S17 [Arabidopsis thaliana] gi|30102846|gb|AAP21341.1| UniGene infoGene info At2g05220 [Arabidopsis thaliana] Length=140 Score = 29.6 bits (65), Expect = 7.8 Identities = 13/28 (46%), Positives = 20/28 (71%), Gaps = 0/28 (0%) Frame = -2 Query 395 SPHLLQRAEEGPRRGFSLKG*KENRPKK 312 S HL++R ++GP RG SLK +E R ++ Sbjct 54 STHLMKRIQKGPVRGISLKLQEEERERR 81 >gi|15228141|ref|NP_178520.1| UniGene infoGene info structural constituent of ribosome [Arabidopsis thaliana] gi|19884102|sp|P49205|RS17A_ARATH Gene info 40S ribosomal protein S17-1 gi|16930429|gb|AAL31900.1|AF419568_1 UniGene infoGene info At2g04390/T1O3.20 [Arabidopsis thaliana] gi|4587611|gb|AAD25839.1| Gene info 40S ribosomal protein S17 [Arabidopsis thaliana] gi|19310511|gb|AAL84989.1| UniGene infoGene info At2g04390/T1O3.20 [Arabidopsis thaliana] gi|21595522|gb|AAM66109.1| UniGene infoGene info 40S ribosomal protein S17 [Arabidopsis thaliana] Length=141 Score = 29.6 bits (65), Expect = 7.8 Identities = 13/28 (46%), Positives = 20/28 (71%), Gaps = 0/28 (0%) Frame = -2 Query 395 SPHLLQRAEEGPRRGFSLKG*KENRPKK 312 S HL++R ++GP RG SLK +E R ++ Sbjct 54 STHLMKRIQKGPVRGISLKLQEEERERR 81 >gi|15228335|ref|NP_187672.1| UniGene infoGene info structural constituent of ribosome [Arabidopsis thaliana] gi|20139843|sp|Q9SQZ1|RS17C_ARATH Gene info 40S ribosomal protein S17-3 gi|12322775|gb|AAG51372.1|AC011560_4 Gene info putative 40S ribosomal protein S17; 27898-27476 [Arabidopsis thaliana] gi|8567795|gb|AAF76367.1| Gene info 40S ribosomal protein S17, putative [Arabidopsis thaliana] gi|17380850|gb|AAL36237.1| UniGene infoGene info putative 40S ribosomal protein S17 [Arabidopsis thaliana] gi|20259073|gb|AAM14252.1| UniGene infoGene info putative 40S ribosomal protein S17 [Arabidopsis thaliana] gi|21593823|gb|AAM65790.1| UniGene infoGene info 40S ribosomal protein S17-3 [Arabidopsis thaliana] Length=140 Score = 29.6 bits (65), Expect = 7.8 Identities = 13/28 (46%), Positives = 20/28 (71%), Gaps = 0/28 (0%) Frame = -2 Query 395 SPHLLQRAEEGPRRGFSLKG*KENRPKK 312 S HL++R ++GP RG SLK +E R ++ Sbjct 54 STHLMKRIQKGPVRGISLKLQEEERERR 81 >gi|20141760|sp|P49215|RS17_LYCES Gene info 40S ribosomal protein S17 gi|5758304|gb|AAD50774.1|AF161704_1 UniGene infoGene info 40S ribosomal protein S17 [Lycopersicon esculentum] Length=144 Score = 29.6 bits (65), Expect = 7.8 Identities = 13/28 (46%), Positives = 20/28 (71%), Gaps = 0/28 (0%) Frame = -2 Query 395 SPHLLQRAEEGPRRGFSLKG*KENRPKK 312 S HL++R ++GP RG SLK +E R ++ Sbjct 54 STHLMKRIQKGPVRGISLKLQEEERERR 81
  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 15, 2007  4:53 AM
  Number of letters in database: 101,054,579
  Number of sequences in database:  283,349
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283349
Number of Hits to DB: 346
Number of extensions: 2
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 570
Length of database: 101054579
Length adjustment: 107
Effective length of query: 463
Effective length of database: 70736236
Effective search space: 5871107588
Effective search space used: 5871107588
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 64 (29.3 bits)