Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168945947-7106-17229394047.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig350 Length=554
Related Structures Score E Sequences producing significant alignments: (Bits) Value gi|115462317|ref|NP_001054758.1| Os05g0169000 [Oryza sativa (... 61.6 3e-19 gi|24637229|gb|AAN63618.1|AF435817_1 thioredoxin h-like protein 61.6 3e-19 gi|1086147|pir||S49353 protein S2 - Phalaris coerulescens 61.2 5e-19 gi|1085952|pir||S49352 protein S1 - Phalaris coerulescens 61.2 5e-19 gi|5732705|gb|AAD49233.1|AF159388_1 thioredoxin-like protein ... 61.2 5e-19 gi|5732703|gb|AAD49232.1|AF159387_1 thioredoxin-like protein [Lo 60.8 8e-19 gi|24637225|gb|AAN63616.1|AF435815_1 thioredoxin h-like protein 60.8 8e-19 gi|27543511|gb|AAO16555.1| thioredoxin h [Leymus chinensis] 60.8 8e-19 gi|5932426|gb|AAD56954.1|AF186240_1 thioredoxin-like protein [Se 60.8 8e-19 gi|5732699|gb|AAD49230.1|AF159385_1 thioredoxin-like protein [Ho 59.3 2e-18 gi|24637237|gb|AAN63622.1|AF438359_1 thioredoxin [Triticum aesti 60.8 4e-18 gi|5732701|gb|AAD49231.1|AF159386_1 thioredoxin-like protein [Se 57.8 6e-18 gi|24637231|gb|AAN63619.1|AF435818_1 thioredoxin h-like protein 76.3 7e-14 gi|15231958|ref|NP_187483.1| electron transporter/ thiol-disu... 72.8 8e-13 gi|115434738|ref|NP_001042127.1| Os01g0168200 [Oryza sativa (... 67.4 3e-11 gi|24637227|gb|AAN63617.1|AF435816_1 thioredoxin h-like protein 63.5 5e-10 gi|11135132|sp|O65049|TRXH_PICMA Thioredoxin H-type (TRX-H) >... 53.5 3e-08 gi|115464505|ref|NP_001055852.1| Os05g0480200 [Oryza sativa (... 47.8 3e-05 gi|18041548|gb|AAL54858.1| tetratricoredoxin [Nicotiana tabacum] 47.8 3e-05 gi|32186040|gb|AAP72290.1| thioredoxin h isoform 1; HvTrxh1 [... 46.6 6e-05 gi|27461140|gb|AAL67139.1| thioredoxin H [Triticum aestivum] 46.6 6e-05 gi|14581677|gb|AAK64512.1| Hsp70 interacting protein/thioredoxin 46.2 8e-05 gi|55670844|pdb|1XFL|A Chain A, Solution Structure Of Thiored... 46.2 8e-05 gi|15230385|ref|NP_190672.1| ATTRX1; thiol-disulfide exchange... 46.2 8e-05 gi|119367477|gb|ABL67654.1| putative H-type thioredoxin [Citrus 45.8 1e-04 gi|19851972|gb|AAL99941.1| thioredoxin H [Populus tremula x Popu 45.8 1e-04 gi|15228921|ref|NP_191201.1| electron transporter/ thiol-disu... 45.8 1e-04 gi|58176806|pdb|1TI3|A Chain A, Solution Structure Of The Thi... 45.8 1e-04 gi|11135312|sp|Q96419|TRXH_FAGES Thioredoxin H-type (TRX-H) >... 37.7 1e-04 gi|16588843|gb|AAL26915.1|AF323593_1 thioredoxin H [Prunus persi 45.1 2e-04 gi|8980491|emb|CAB96931.1| thioredoxin h [Triticum aestivum] ... 44.3 3e-04 gi|32186042|gb|AAP72291.1| thioredoxin h isoform 2; HvTrxh2 [... 44.3 3e-04 gi|82407383|pdb|1WMJ|A Chain A, Solution Structure Of Thiored... 44.3 3e-04 gi|53748515|emb|CAH59450.1| thioredoxin 1 [Plantago major] 44.3 3e-04 gi|115470941|ref|NP_001059069.1| Os07g0186000 [Oryza sativa (... 44.3 3e-04 gi|14485509|emb|CAC42084.1| thioredoxin h [Pisum sativum] 43.9 4e-04 gi|267124|sp|P29449|TRXH1_TOBAC Thioredoxin H-type 1 (TRX-H1)... 43.9 4e-04 gi|11135126|sp|O64394|TRXH_WHEAT Thioredoxin H-type (TRX-H) (... 43.9 4e-04 gi|16517113|gb|AAL24517.1|AF420472_1 thioredoxin H [Triticum ... 43.9 4e-04 gi|80973754|gb|ABB53600.1| thioredoxin h [Eucalyptus grandis] 43.5 5e-04 gi|74058514|gb|AAZ98843.1| thioredoxin h2 [Medicago truncatula] 42.7 8e-04 gi|53748519|emb|CAH59452.1| thioredoxin 3 [Plantago major] 42.7 8e-04 gi|74058512|gb|AAZ98842.1| thioredoxin h1 [Medicago truncatula] 42.4 0.001 gi|40287476|gb|AAR83852.1| thioredoxin [Capsicum annuum] 42.4 0.001 gi|71534922|gb|AAZ32865.1| thioredoxin h [Medicago sativa] 42.4 0.001 gi|33621082|gb|AAQ23134.1| thioredoxin H1 [Ipomoea batatas] 38.5 0.001 gi|11135282|sp|Q43636|TRXH_RICCO Thioredoxin H-type (TRX-H) >... 41.6 0.002 gi|586099|sp|Q07090|TRXH2_TOBAC Thioredoxin H-type 2 (TRX-H2)... 41.6 0.002 gi|115464793|ref|NP_001055996.1| Os05g0508500 [Oryza sativa (... 40.8 0.003 gi|27466894|gb|AAO12854.1| thioredoxin h [Pisum sativum] 40.8 0.003 gi|115470983|ref|NP_001059090.1| Os07g0190800 [Oryza sativa (... 40.8 0.003 gi|12082335|dbj|BAB20886.1| thioredoxin h [Oryza sativa (japonic 40.8 0.003 gi|119390311|pdb|2IWT|A Chain A, Thioredoxin H2 (Hvtrxh2) In ... 40.4 0.004 gi|53801490|gb|AAU93947.1| thioredoxin H [Helicosporidium sp. ex 40.4 0.004 gi|13624884|emb|CAC36986.1| thioredoxin h [Pisum sativum] 40.4 0.004 gi|119367472|gb|ABL67652.1| putative thioredoxin H protein [Citr 39.7 0.007 gi|30575686|gb|AAP33009.1| thioredoxin H [Citrus x paradisi] 39.7 0.007 gi|30688406|ref|NP_181611.2| electron transporter [Arabidopsi... 39.7 0.007 gi|89258107|gb|ABD65296.1| thioredoxin [Solanum berthaultii] 39.3 0.009 gi|66841004|emb|CAI64401.1| thioredoxin h2 protein [Zea mays] 39.3 0.009 gi|18397764|ref|NP_564371.1| electron transporter/ thiol-disu... 39.3 0.009 gi|9755396|gb|AAF98203.1|AC000107_26 F17F8.6 [Arabidopsis thalia 39.3 0.009 gi|115479053|ref|NP_001063120.1| Os09g0401200 [Oryza sativa (... 38.9 0.012 gi|25990392|gb|AAN76509.1|AF352030_1 thioredoxin h [Brassica rap 38.5 0.016 gi|4895214|gb|AAD32800.1|AC007660_1 putative thioredoxin H [A... 31.2 0.019 gi|32815907|gb|AAP88338.1| At3g17880 [Arabidopsis thaliana] 38.1 0.021 gi|27763681|gb|AAO20258.1| cytosolic thioredoxin h2 [Chlamydomon 38.1 0.021 gi|11494247|gb|AAG35777.1|AF273844_1 thioredoxin-h-like prote... 38.1 0.021 gi|30684711|ref|NP_188415.2| ATTDX (TETRATICOPEPTIDE DOMAIN-C... 38.1 0.021 gi|11135129|sp|O64432|TRXH_BRARA Thioredoxin H-type (TRX-H) >... 38.1 0.021 gi|57014139|sp|P68176|TRXH_BRAOL Thioredoxin H-type (TRX-H) (... 38.1 0.021 gi|9294492|dbj|BAB02711.1| thioredoxin-like protein [Arabidopsis 38.1 0.021 gi|21536657|gb|AAM60989.1| tetratricoredoxin [Arabidopsis thalia 37.7 0.027 gi|66841002|emb|CAI64400.1| thioredoxin h1 protein [Zea mays] 37.4 0.035 gi|33621084|gb|AAQ23135.1| thioredoxin H3 [Ipomoea batatas] 37.4 0.035 gi|27763683|gb|AAO20259.1| thioredoxin o [Chlamydomonas reinhard 37.4 0.035 gi|15226875|ref|NP_181046.1| electron transporter/ thiol-disu... 37.4 0.035 gi|26453152|dbj|BAC43652.1| putative thioredoxin [Arabidopsis th 37.4 0.035 gi|116056426|emb|CAL52715.1| Thioredoxin (ISS) [Ostreococcus tau 37.0 0.046 gi|66096352|gb|AAY42864.1| thioredoxin H [Nicotiana alata] 36.6 0.060 gi|89363535|emb|CAJ84246.1| putative thioredoxin [Pisum sativum] 36.6 0.060 gi|115455973|ref|NP_001051587.1| Os03g0800700 [Oryza sativa (... 36.2 0.078 gi|1388084|gb|AAC49356.1| thioredoxin h 36.2 0.078 gi|77554325|gb|ABA97121.1| Thioredoxin family protein [Oryza ... 36.2 0.078 gi|25405885|pir||G96509 protein F27F5.21 [imported] - Arabido... 36.2 0.078 gi|15219537|ref|NP_175128.1| ATTRX5; thiol-disulfide exchange... 36.2 0.078 gi|115469414|ref|NP_001058306.1| Os06g0665900 [Oryza sativa (... 35.8 0.10 gi|11135265|sp|Q39362|TRXH2_BRANA Thioredoxin H-type 2 (TRX-H... 35.8 0.10 gi|15237341|ref|NP_197144.1| electron transporter/ thiol-disu... 35.4 0.13 gi|116057647|emb|CAL53850.1| Thioredoxin/protein disulfide is... 35.0 0.17 gi|15239136|ref|NP_199112.1| ATTRX3; thiol-disulfide exchange... 35.0 0.17 gi|42565411|gb|AAS20979.1| thioredoxin [Hyacinthus orientalis] 34.7 0.23 gi|33621080|gb|AAQ23133.1| thioredoxin H2 [Ipomoea batatas] 34.3 0.30 gi|3334376|sp|Q41864|TRXM_MAIZE Thioredoxin M-type, chloropla... 34.3 0.30 gi|21617968|gb|AAM67018.1| thioredoxin [Arabidopsis thaliana] 33.9 0.39 gi|992960|emb|CAA84610.1| thioredoxin [Arabidopsis thaliana] 33.9 0.39 gi|1388082|gb|AAC49355.1| thioredoxin h 33.9 0.39 gi|46326970|gb|AAS88427.1| thioredoxin [Glycine max] 33.9 0.39 gi|15223645|ref|NP_173403.1| ATTRX4; thiol-disulfide exchange... 33.9 0.39 gi|15240254|ref|NP_200952.1| electron transporter/ thiol-disu... 33.9 0.39
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 419 Number of extensions: 4 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 554 Length of database: 101054579 Length adjustment: 106 Effective length of query: 448 Effective length of database: 71019585 Effective search space: 5539527630 Effective search space used: 5539527630 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 64 (29.3 bits)