RID=1169013456-5457-214715988528.BLASTQ4, Contig354

BLASTX 2.2.15 [Oct-15-2006]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1169013456-5457-214715988528.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,460,989 sequences; 1,533,424,333 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Query=  Contig354
Length=542

Distribution of 25 Blast Hits on the Query Sequence

                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|87240733|gb|ABD32591.1|  conserved hypothetical protein [Medic  42.7    8e-04
gi|9294090|dbj|BAB01942.1|  unnamed protein product [Arabidops...  32.0    0.007
gi|18402895|ref|NP_565739.1|  unknown protein [Arabidopsis tha...  30.0    0.015 
gi|115475277|ref|NP_001061235.1|  Os08g0205800 [Oryza sativa (...  35.4    0.018 
gi|18403308|ref|NP_566703.1|  unknown protein [Arabidopsis thalia  38.1    0.020 
gi|18402900|ref|NP_565740.1|  unknown protein [Arabidopsis tha...  30.4    0.031 
gi|18390510|ref|NP_563734.1|  unknown protein [Arabidopsis tha...  32.3    1.1   
gi|115449415|ref|NP_001048461.1|  Os02g0809100 [Oryza sativa (...  30.8    3.1   
gi|47497085|dbj|BAD19136.1|  cticosapeptide/Phox/Bem1p (PB1) d...  30.8    3.1   
gi|116831133|gb|ABK28521.1|  unknown [Arabidopsis thaliana]        30.4    4.1  
gi|115451375|ref|NP_001049288.1|  Os03g0200400 [Oryza sativa (...  30.4    4.1   
gi|108706636|gb|ABF94431.1|  expressed protein [Oryza sativa (jap  30.4    4.1  
gi|108706637|gb|ABF94432.1|  expressed protein [Oryza sativa (jap  30.4    4.1  
gi|79567608|ref|NP_180779.2|  unknown protein [Arabidopsis tha...  30.4    4.1   
gi|37700332|gb|AAR00622.1|  hypothetical protein [Oryza sativa (j  30.0    5.3   
gi|84468354|dbj|BAE71260.1|  hypothetical protein [Trifolium prat  30.0    5.3  
gi|56202192|dbj|BAD73675.1|  hypothetical protein [Oryza sativ...  29.6    7.0  
gi|15234820|ref|NP_193349.1|  unknown protein [Arabidopsis tha...  29.6    7.0   
gi|116056614|emb|CAL52903.1|  Amino acid transporters (ISS) [Ostr  29.3    9.1  
gi|90399151|emb|CAJ86080.1|  H0818H01.2 [Oryza sativa (indica ...  29.3    9.1  
gi|115461198|ref|NP_001054199.1|  Os04g0668900 [Oryza sativa (...  29.3    9.1

Alignments

 

>gi|87240733|gb|ABD32591.1|  conserved hypothetical protein [Medicago truncatula]
Length=80

 Score = 42.7 bits (99),  Expect = 8e-04
 Identities = 32/46 (69%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
 Frame = -2

Query  343  GYPMSKDGQEQYSQNPVAPETKSRGDGFWKGccaalcccclldaCF  206
            GYP SKDG   Y Q  +  +T SRGDGFWKGCCAALCCCC LD CF
Sbjct  36   GYP-SKDGSAGYPQQRIPDQTTSRGDGFWKGCCAALCCCCALDICF  80


>gi|9294090|dbj|BAB01942.1|  unnamed protein product [Arabidopsis thaliana]
 gi|21593174|gb|AAM65123.1|  unknown [Arabidopsis thaliana]
 gi|51969350|dbj|BAD43367.1|  unknown protein [Arabidopsis thaliana]
 gi|51969492|dbj|BAD43438.1|  unknown protein [Arabidopsis thaliana]
 gi|51970550|dbj|BAD43967.1|  unknown protein [Arabidopsis thaliana]
 gi|51970942|dbj|BAD44163.1|  unknown protein [Arabidopsis thaliana]
 gi|51971146|dbj|BAD44265.1|  unknown protein [Arabidopsis thaliana]
Length=72

 Score = 32.0 bits (71),  Expect(2) = 0.007
 Identities = 25/29 (86%), Positives = 28/29 (96%), Gaps = 0/29 (0%)
 Frame = -2

Query  292  APETKSRGDGFWKGccaalcccclldaCF  206
            A ETKS+GDGFWKGCCAA+CCCC+LDACF
Sbjct  44   AVETKSKGDGFWKGCCAAICCCCVLDACF  72


 Score = 26.9 bits (58),  Expect(2) = 0.007
 Identities = 9/18 (50%), Positives = 12/18 (66%), Gaps = 0/18 (0%)
 Frame = -1

Query  389  PASTAPGPYVAPPPAWLP  336
            P+ T+ GPY +PPP   P
Sbjct  14   PSQTSSGPYTSPPPIGYP  31


>gi|18402895|ref|NP_565739.1|  unknown protein [Arabidopsis thaliana]
 gi|4263700|gb|AAD15386.1|  expressed protein [Arabidopsis thaliana]
 gi|21593591|gb|AAM65558.1|  unknown [Arabidopsis thaliana]
 gi|26451539|dbj|BAC42867.1|  unknown protein [Arabidopsis thaliana]
 gi|28827664|gb|AAO50676.1|  unknown protein [Arabidopsis thaliana]
Length=71

 Score = 30.0 bits (66),  Expect(2) = 0.015
 Identities = 30/47 (63%), Positives = 33/47 (70%), Gaps = 6/47 (12%)
 Frame = -2

Query  343  GYPMSKDGQEQYSQNPVAP-ETKSRGDGFWKGccaalcccclldaCF  206
            GYP S       S   VAP ETKS+GDGF KGC AA+CCCC+LDACF
Sbjct  30   GYPTS-----DISHATVAPVETKSKGDGFLKGCLAAMCCCCVLDACF  71


 Score = 27.7 bits (60),  Expect(2) = 0.015
 Identities = 10/21 (47%), Positives = 12/21 (57%), Gaps = 0/21 (0%)
 Frame = -1

Query  398  AYPPASTAPGPYVAPPPAWLP  336
            AYP    + GPY+ PPP   P
Sbjct  12   AYPTPPVSTGPYMTPPPLGYP  32


>gi|115475277|ref|NP_001061235.1|  Os08g0205800 [Oryza sativa (japonica cultivar-group)]
 gi|113623204|dbj|BAF23149.1|  Os08g0205800 [Oryza sativa (japonica cultivar-group)]
Length=91

 Score = 35.4 bits (80),  Expect(2) = 0.018
 Identities = 33/54 (61%), Positives = 33/54 (61%), Gaps = 8/54 (14%)
 Frame = -2

Query  343  GYPMSKDGQEQYSQNPVAPETKSR--------GDGFWKGccaalcccclldaCF  206
            GYP     QEQY     A ET SR        GDGFWKGCCAALCCCCLLD CF
Sbjct  38   GYPTKDGPQEQYPAGAGAGETTSRGHHHHHHHGDGFWKGCCAALCCCCLLDMCF  91


 Score = 21.9 bits (45),  Expect(2) = 0.018
 Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 7/23 (30%)
 Frame = -1

Query  404  QIAYPPASTAPGPYVAPPPAWLP  336
            Q AYP        YVAPPPA  P
Sbjct  25   QQAYPA-------YVAPPPAGYP  40


>gi|18403308|ref|NP_566703.1|  unknown protein [Arabidopsis thaliana]
Length=52

 Score = 38.1 bits (87),  Expect = 0.020
 Identities = 18/26 (69%), Positives = 19/26 (73%), Gaps = 0/26 (0%)
 Frame = -3

Query  279  SPEVMDSGRDVVLPCAAVVFWMHAFE  202
            SP  M  G+DVVLP AAVV WMHA E
Sbjct  15   SPRAMVFGKDVVLPYAAVVSWMHASE  40


>gi|18402900|ref|NP_565740.1|  unknown protein [Arabidopsis thaliana]
 gi|13272417|gb|AAK17147.1|AF325079_1  unknown protein [Arabidopsis thaliana]
 gi|4263698|gb|AAD15384.1|  expressed protein [Arabidopsis thaliana]
 gi|18389222|gb|AAL67054.1|  unknown protein [Arabidopsis thaliana]
 gi|20465359|gb|AAM20083.1|  unknown protein [Arabidopsis thaliana]
 gi|21618272|gb|AAM67322.1|  unknown [Arabidopsis thaliana]
Length=71

 Score = 30.4 bits (67),  Expect(2) = 0.031
 Identities = 12/21 (57%), Positives = 13/21 (61%), Gaps = 0/21 (0%)
 Frame = -1

Query  398  AYPPASTAPGPYVAPPPAWLP  336
            AYP    + GPYVAPPP   P
Sbjct  12   AYPTPPVSTGPYVAPPPLGYP  32


 Score = 26.2 bits (56),  Expect(2) = 0.031
 Identities = 22/27 (81%), Positives = 25/27 (92%), Gaps = 0/27 (0%)
 Frame = -2

Query  286  ETKSRGDGFWKGccaalcccclldaCF  206
            ETKS+GDGF KGC AA+CCCC+LDACF
Sbjct  45   ETKSKGDGFLKGCLAAMCCCCVLDACF  71


>gi|18390510|ref|NP_563734.1|  unknown protein [Arabidopsis thaliana]
 gi|13430464|gb|AAK25854.1|AF360144_1  unknown protein [Arabidopsis thaliana]
 gi|2388562|gb|AAB71443.1|  EST gb|ATTS0295  comes from this gene. [Arabidopsis thaliana]
 gi|15810661|gb|AAL07255.1|  unknown protein [Arabidopsis thaliana]
 gi|21554110|gb|AAM63190.1|  unknown [Arabidopsis thaliana]
 gi|110740944|dbj|BAE98567.1|  hypothetical protein [Arabidopsis thaliana]
Length=72

 Score = 32.3 bits (72),  Expect = 1.1
 Identities = 26/46 (56%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
 Frame = -2

Query  343  GYPMSKDGQEQYSQNPVAPETKSRGDGFWKGccaalcccclldaCF  206
            GYP ++      +Q  V  ETKS+GDGF+KGC AA+CCCC LD CF
Sbjct  29   GYPTNQPSHGSVAQGKV--ETKSKGDGFFKGCLAAMCCCCALDICF  72


>gi|115449415|ref|NP_001048461.1|  Os02g0809100 [Oryza sativa (japonica cultivar-group)]
 gi|113537992|dbj|BAF10375.1|  Os02g0809100 [Oryza sativa (japonica cultivar-group)]
Length=585

 Score = 30.8 bits (68),  Expect = 3.1
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 0/33 (0%)
 Frame = -1

Query  410  SLQIAYPPASTAPGPYVAPPPAWLPYEQRRSRA  312
            SL  AYPPA+  P P  A P  +LP  Q +  A
Sbjct  416  SLTRAYPPATVTPTPPTATPEYYLPKYQEKPAA  448


>gi|47497085|dbj|BAD19136.1|  cticosapeptide/Phox/Bem1p (PB1) domain-containing protein-like 
[Oryza sativa (japonica cultivar-group)]
 gi|47497205|dbj|BAD19251.1|  cticosapeptide/Phox/Bem1p (PB1) domain-containing protein-like 
[Oryza sativa (japonica cultivar-group)]
Length=507

 Score = 30.8 bits (68),  Expect = 3.1
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 0/33 (0%)
 Frame = -1

Query  410  SLQIAYPPASTAPGPYVAPPPAWLPYEQRRSRA  312
            SL  AYPPA+  P P  A P  +LP  Q +  A
Sbjct  338  SLTRAYPPATVTPTPPTATPEYYLPKYQEKPAA  370


>gi|116831133|gb|ABK28521.1|  unknown [Arabidopsis thaliana]
Length=76

 Score = 30.4 bits (67),  Expect = 4.1
 Identities = 12/21 (57%), Positives = 13/21 (61%), Gaps = 0/21 (0%)
 Frame = -1

Query  398  AYPPASTAPGPYVAPPPAWLP  336
            AYP    + GPYVAPPP   P
Sbjct  12   AYPTPPVSTGPYVAPPPLGYP  32


>gi|115451375|ref|NP_001049288.1|  Os03g0200400 [Oryza sativa (japonica cultivar-group)]
 gi|113547759|dbj|BAF11202.1|  Os03g0200400 [Oryza sativa (japonica cultivar-group)]
Length=142

 Score = 30.4 bits (67),  Expect = 4.1
 Identities = 14/34 (41%), Positives = 15/34 (44%), Gaps = 3/34 (8%)
 Frame = -1

Query  395  YPPASTAPGPYVAPPPAWLPYEQRRSRAIFSKSC  294
            YPP    P PY  PPP   P   R  R  F + C
Sbjct  98   YPPPQMYPPPYAQPPP---PPPHRHERPSFCQGC  128


>gi|108706636|gb|ABF94431.1|  expressed protein [Oryza sativa (japonica cultivar-group)]
Length=214

 Score = 30.4 bits (67),  Expect = 4.1
 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = -1

Query  419  SRISLQIA--YPPASTAPGPYVAPPPAWLPYEQRRSRAI  309
            S + +QIA  YPPA   P P V PP   LP + R   A+
Sbjct  65   SVLPIQIAPPYPPARRTPPPTVGPPRLRLPVKIRHRAAV  103


>gi|108706637|gb|ABF94432.1|  expressed protein [Oryza sativa (japonica cultivar-group)]
Length=131

 Score = 30.4 bits (67),  Expect = 4.1
 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = -1

Query  419  SRISLQIA--YPPASTAPGPYVAPPPAWLPYEQRRSRAI  309
            S + +QIA  YPPA   P P V PP   LP + R   A+
Sbjct  65   SVLPIQIAPPYPPARRTPPPTVGPPRLRLPVKIRHRAAV  103


>gi|79567608|ref|NP_180779.2|  unknown protein [Arabidopsis thaliana]
 gi|91806307|gb|ABE65881.1|  hypothetical protein At2g32200 [Arabidopsis thaliana]
Length=75

 Score = 30.4 bits (67),  Expect = 4.1
 Identities = 12/21 (57%), Positives = 13/21 (61%), Gaps = 0/21 (0%)
 Frame = -1

Query  398  AYPPASTAPGPYVAPPPAWLP  336
            AYP    + GPYVAPPP   P
Sbjct  12   AYPTPPVSTGPYVAPPPLGYP  32


>gi|37700332|gb|AAR00622.1|  hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length=209

 Score = 30.0 bits (66),  Expect = 5.3
 Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = +3

Query  195  GNLQKHASKRQQQHKAAQHPFQN-PSPLDLVSGATG  299
            GN  + AS+R    +  +HP+ + PSP  L++GA G
Sbjct  102  GNAGRRASRRGSPPRRCRHPYSSEPSPPPLLAGAAG  137


>gi|84468354|dbj|BAE71260.1|  hypothetical protein [Trifolium pratense]
Length=146

 Score = 30.0 bits (66),  Expect = 5.3
 Identities = 12/51 (23%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = +1

Query  148  QMETLMNEHD*ASKALEIFKSMHPK-DNSSTRQHNIPSRIHHLWTWFRGQQ  297
            +ME ++++H+ A  A ++  ++  K   S  R+  I  ++  +W WF+ ++
Sbjct  21   EMEAILSDHNNAMPAKDVLDALADKFSESPNRKGKITVQMKQVWNWFQNKR  71


>gi|56202192|dbj|BAD73675.1|  hypothetical protein [Oryza sativa (japonica cultivar-group)]
 gi|56202249|dbj|BAD73690.1|  hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length=428

 Score = 29.6 bits (65),  Expect = 7.0
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
 Frame = -1

Query  461  PPCCSN*IQR*VTSSRISLQIA-YPPASTAPGPYVAPPP  348
            PPCC    +R   ++ I+++ A +PP  +  GP + PPP
Sbjct  198  PPCCR---RRQAAAATIAMESAPFPPPPSPRGPVLLPPP  233


>gi|15234820|ref|NP_193349.1|  unknown protein [Arabidopsis thaliana]
 gi|2244972|emb|CAB10393.1|  extensin like protein [Arabidopsis thaliana]
 gi|7268363|emb|CAB78656.1|  extensin like protein [Arabidopsis thaliana]
 gi|37202016|gb|AAQ89623.1|  At4g16140 [Arabidopsis thaliana]
 gi|51969864|dbj|BAD43624.1|  extensin like protein, predicted GPI-anchored protein [Arabidopsis 
thaliana]
Length=164

 Score = 29.6 bits (65),  Expect = 7.0
 Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 0/47 (0%)
 Frame = -1

Query  473  YYFFPPCCSN*IQR*VTSSRISLQIAYPPASTAPGPYVAPPPAWLPY  333
            YY++PP   +   R   SS        PP S    PY  PP   +PY
Sbjct  78   YYYYPPASQSGSYRPPPSSSSGGYYYPPPKSGGNYPYTPPPNPIVPY  124


>gi|116056614|emb|CAL52903.1|  Amino acid transporters (ISS) [Ostreococcus tauri]
Length=502

 Score = 29.3 bits (64),  Expect = 9.1
 Identities = 11/24 (45%), Positives = 17/24 (70%), Gaps = 0/24 (0%)
 Frame = -3

Query  276  PEVMDSGRDVVLPCAAVVFWMHAF  205
            P + DSG+ V+LPCA+V+  +  F
Sbjct  205  PTIHDSGKVVLLPCASVIITLSVF  228


>gi|90399151|emb|CAJ86080.1|  H0818H01.2 [Oryza sativa (indica cultivar-group)]
 gi|90399243|emb|CAJ86199.1|  B0811B10.18 [Oryza sativa (indica cultivar-group)]
Length=320

 Score = 29.3 bits (64),  Expect = 9.1
 Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 0/25 (0%)
 Frame = -1

Query  389  PASTAPGPYVAPPPAWLPYEQRRSR  315
            PA+ AP    +PPPA+LP    R R
Sbjct  11   PAAAAPSTRCSPPPAFLPLRAHRPR  35


>gi|115461198|ref|NP_001054199.1|  Os04g0668900 [Oryza sativa (japonica cultivar-group)]
 gi|21105122|gb|AAC35554.3|  oxidase [Oryza sativa (japonica cultivar-group)]
 gi|32488386|emb|CAE02811.1|  OSJNBa0043A12.16 [Oryza sativa (japonica cultivar-group)]
 gi|113565770|dbj|BAF16113.1|  Os04g0668900 [Oryza sativa (japonica cultivar-group)]
Length=336

 Score = 29.3 bits (64),  Expect = 9.1
 Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 0/25 (0%)
 Frame = -1

Query  389  PASTAPGPYVAPPPAWLPYEQRRSR  315
            PA+ AP    +PPPA+LP    R R
Sbjct  11   PAAAAPSTRCSPPPAFLPLRAHRPR  35

  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 16, 2007  5:53 PM
  Number of letters in database: 101,065,385
  Number of sequences in database:  283,397
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283397
Number of Hits to DB: 402
Number of extensions: 5
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 542
Length of database: 101065385
Length adjustment: 106
Effective length of query: 436
Effective length of database: 71025303
Effective search space: 5255872422
Effective search space used: 5255872422
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 64 (29.3 bits)