Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1169013460-5950-172954138779.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,460,989 sequences; 1,533,424,333 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig355 Length=573
Score E Sequences producing significant alignments: (Bits) Value gi|92894897|gb|ABE92431.1| hypothetical protein MtrDRAFT_AC14... 85.5 1e-16 gi|30682907|ref|NP_188012.2| AtGRF5 (GROWTH-REGULATING FACTOR... 65.5 1e-10 gi|11994367|dbj|BAB02326.1| unnamed protein product [Arabidopsis 64.7 2e-10 gi|6573149|gb|AAF17567.1|AF201895_1 growth-regulating factor 1 [ 39.7 0.008 gi|115449017|ref|NP_001048288.1| Os02g0776900 [Oryza sativa (... 37.7 0.029 gi|46805514|dbj|BAD16965.1| growth-regulating factor 1-like [... 35.0 0.19 gi|116310919|emb|CAH67857.1| B0403H10-OSIGBa0105A11.9 [Oryza sat 33.9 0.42 gi|115460326|ref|NP_001053763.1| Os04g0600900 [Oryza sativa (... 33.9 0.42 gi|38345778|emb|CAD41819.2| OSJNBa0083N12.16 [Oryza sativa (japo 33.9 0.42 gi|18396273|ref|NP_027759.1| AtGRF6 (GROWTH-REGULATING FACTOR... 32.7 0.93 gi|46367640|emb|CAD97478.1| transcription activator GRF2 [Ory... 32.3 1.2 gi|115448127|ref|NP_001047843.1| Os02g0701300 [Oryza sativa (... 32.3 1.2 gi|5902365|gb|AAD55467.1|AC009322_7 Putative splicing factor Prp 31.2 2.7 gi|15220049|ref|NP_178124.1| SUS2 (ABNORMAL SUSPENSOR 2) [Arabid 31.2 2.7 gi|115462269|ref|NP_001054734.1| Os05g0163200 [Oryza sativa (... 30.0 6.0 gi|55296044|dbj|BAD67606.1| putative splicing factor Prp8 [Or... 30.0 6.0 gi|18146908|dbj|BAB83148.1| maturase K [Sedum aizoon] 30.0 6.0 gi|11066477|gb|AAG28600.1|AF247134_1 fatty acid elongase 1-like 29.6 7.9 gi|15217629|ref|NP_176620.1| DNA binding / transcription fact... 29.6 7.9
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 16, 2007 5:53 PM Number of letters in database: 101,065,385 Number of sequences in database: 283,397 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283397 Number of Hits to DB: 365 Number of extensions: 0 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 573 Length of database: 101065385 Length adjustment: 107 Effective length of query: 466 Effective length of database: 70741906 Effective search space: 5942320104 Effective search space used: 5942320104 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 64 (29.3 bits)