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BLASTX 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman 
(1997), "Gapped BLAST and PSI-BLAST: a new generation of 
protein database search programs", Nucleic Acids Res. 25:3389-3402.

RID: 1169013793-30190-10230957151.BLASTQ4


Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
           4,460,989 sequences; 1,533,424,333 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Query=  Contig358
Length=572


Distribution of 78 Blast Hits on the Query Sequence



                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|18417634|ref|NP_567849.1|  ubiquitin-protein ligase [Arabid...   165    3e-50 UniGene infoGene info
gi|92868841|gb|ABE78800.1|  Cyclin-like F-box [Medicago truncatul   147    1e-47
gi|18424042|ref|NP_568870.1|  SKIP1 (SKP1 INTERACTING PARTNER ...   148    1e-47 UniGene infoGene info
gi|37805883|dbj|BAC99611.1|  putative SKP1 interacting partner...   101    5e-26 Gene info
gi|92868840|gb|ABE78799.1|  SKP1 interacting partner 1-related [M  42.7    7e-08
gi|15229043|ref|NP_190457.1|  unknown protein [Arabidopsis tha...  53.9    4e-07 UniGene infoGene info
gi|5732066|gb|AAD48965.1|AF147263_7  contains similarity to Me...  52.0    1e-06
gi|3273101|emb|CAA76808.1|  N7 protein [Medicago truncatula]       50.1    6e-06 UniGene info
gi|21618163|gb|AAM67213.1|  unknown [Arabidopsis thaliana]         48.9    1e-05 UniGene info
gi|7267308|emb|CAB81090.1|  N7-like protein [Arabidopsis thaliana  43.1    7e-04
gi|18412949|ref|NP_567295.1|  ubiquitin-protein ligase [Arabidops  43.1    7e-04 UniGene infoGene info
gi|18413178|ref|NP_567343.1|  ubiquitin-protein ligase [Arabid...  35.8    7e-04 UniGene infoGene info
gi|115454265|ref|NP_001050733.1|  Os03g0638900 [Oryza sativa (...  42.7    9e-04 Gene info
gi|115482802|ref|NP_001064994.1|  Os10g0502900 [Oryza sativa (...  42.7    9e-04 Gene info
gi|21593361|gb|AAM65310.1|  F-box protein family, AtFBL20 [Arabid  42.4    0.001 UniGene info
gi|18412947|ref|NP_567294.1|  ubiquitin-protein ligase [Arabid...  42.4    0.001 UniGene infoGene info
gi|30692594|ref|NP_849530.1|  unknown protein [Arabidopsis tha...  38.9    0.002 UniGene infoGene info
gi|7267307|emb|CAB81089.1|  N7-like protein [Arabidopsis thaliana  38.5    0.017
gi|51090940|dbj|BAD35544.1|  putative F-box protein Fbl2 [Oryz...  38.5    0.017
gi|108862944|gb|ABA99360.2|  F-box domain containing protein, ...  37.4    0.037
gi|115475640|ref|NP_001061416.1|  Os08g0269800 [Oryza sativa (...  36.2    0.083 Gene info
gi|92873243|gb|ABE81734.1|  Cyclin-like F-box [Medicago trunca...  36.2    0.083
gi|18414458|ref|NP_567467.1|  ubiquitin-protein ligase [Arabid...  29.6    0.085 UniGene infoGene info
gi|87240622|gb|ABD32480.1|  Cyclin-like F-box [Medicago truncatul  35.8    0.11 
gi|115445787|ref|NP_001046673.1|  Os02g0317500 [Oryza sativa (...  35.8    0.11  Gene info
gi|40253645|dbj|BAD05588.1|  F-box protein-like [Oryza sativa ...  35.4    0.14  Gene info
gi|115444885|ref|NP_001046222.1|  Os02g0200900 [Oryza sativa (...  34.3    0.32  Gene info
gi|46390385|dbj|BAD15849.1|  putative F-box protein [Oryza sativa  34.3    0.32  Gene info
gi|38637149|dbj|BAD03402.1|  hypothetical protein [Oryza sativa (  34.3    0.32  Gene info
gi|40253666|dbj|BAD05609.1|  putative N7 protein [Oryza sativa (j  32.7    0.92  Gene info
gi|38637143|dbj|BAD03396.1|  F-box protein family-like [Oryza ...  32.7    0.92  Gene info
gi|21536497|gb|AAM60829.1|  F-box protein family, AtFBL4 [Arabido  29.6    1.1   UniGene info
gi|115475167|ref|NP_001061180.1|  Os08g0193500 [Oryza sativa (...  32.3    1.2   Gene info
gi|115445783|ref|NP_001046671.1|  Os02g0317300 [Oryza sativa (...  32.0    1.6   Gene info
gi|92890264|gb|ABE90278.1|  Leucine Rich Repeat, putative [Med...  26.9    1.7  
gi|18412951|ref|NP_567296.1|  ubiquitin-protein ligase [Arabid...  31.6    2.0   UniGene infoGene info
gi|92879367|gb|ABE85496.1|  Cyclin-like F-box [Medicago truncatul  31.2    2.7  
gi|18421172|ref|NP_568502.1|  ubiquitin-protein ligase [Arabid...  31.2    2.7   UniGene infoGene info
gi|82734614|gb|ABB89717.1|  EIN3-binding F-box protein 1 [Sola...  30.8    3.5   Gene info
gi|115486379|ref|NP_001068333.1|  Os11g0637300 [Oryza sativa (...  30.8    3.5   Gene info
gi|15222749|ref|NP_175955.1|  unknown protein [Arabidopsis tha...  30.8    3.5   UniGene infoGene info
gi|38637157|dbj|BAD03410.1|  hypothetical protein [Oryza sativ...  30.8    3.5   Gene info
gi|13619398|emb|CAC36384.1|  hypothetical protein [Arabidopsis th  30.8    3.5   UniGene info
gi|115464113|ref|NP_001055656.1|  Os05g0437900 [Oryza sativa (...  30.4    4.6   Gene info
gi|31249728|gb|AAP46221.1|  hypothetical protein [Oryza sativa (j  30.4    4.6   Gene info
gi|5817396|gb|AAD52732.1|AF123674_1  NADH dehydrogenase [Amphiant  30.4    4.6  
gi|18412177|ref|NP_567255.1|  GRH1 (GRR1-LIKE PROTEIN 1); ubiq...  30.4    4.6   UniGene infoGene info
gi|15027885|gb|AAK76473.1|  putative F-box protein GRR1 protei...  30.4    4.6   UniGene info
gi|12658970|gb|AAK01147.1|AF291816_1  GRR1-like protein 1 [Arabid  30.4    4.6   UniGene info
gi|18396373|ref|NP_564288.1|  alpha-mannosidase/ calcium ion b...  30.0    5.9   UniGene infoGene info
gi|40253664|dbj|BAD05607.1|  putative N7 protein [Oryza sativa (j  30.0    5.9   Gene info
gi|15239399|ref|NP_197917.1|  EBF2 (EIN3-BINDING F BOX PROTEIN...  30.0    5.9   UniGene infoGene info
gi|30679379|ref|NP_568094.2|  ubiquitin-protein ligase [Arabid...  25.0    6.1   UniGene infoGene info
gi|7327831|emb|CAB82288.1|  putative protein [Arabidopsis thalian  25.0    6.1  
gi|116061755|emb|CAL52473.1|  unnamed protein product [Ostreococc  29.6    7.8  
gi|110288610|gb|AAP52122.2|  F-box domain containing protein, ...  29.6    7.8  
gi|115441261|ref|NP_001044910.1|  Os01g0866800 [Oryza sativa (...  29.6    7.8   Gene info
gi|15209151|gb|AAK91884.1|AC091665_10  Putative leucine-rich repe  29.6    7.8  
gi|40253675|dbj|BAD05618.1|  F-box protein-like [Oryza sativa (ja  29.6    7.8   Gene info
Alignments
>gi|18417634|ref|NP_567849.1| UniGene infoGene info ubiquitin-protein ligase [Arabidopsis thaliana] gi|7269965|emb|CAB79782.1| Gene info putative protein [Arabidopsis thaliana] Length=301 Score = 165 bits (418), Expect(3) = 3e-50 Identities = 76/125 (60%), Positives = 95/125 (76%), Gaps = 0/125 (0%) Frame = +2 Query 35 GETDTESGLISDWAELTHECLVNILSRLTFEHRWTGPMLVCKPWLNACKDPTLNSVFDLE 214 G+ + SGL DW+ELT ECL++I SRL+ E RW GPMLV K W+NAC DPTLN++FDLE Sbjct 8 GKVEMGSGLYPDWSELTRECLLDIFSRLSQEQRWIGPMLVSKNWMNACYDPTLNTIFDLE 67 Query 215 TRFDSSAESPRWWTPEFERKIDSMLRSVISWSNGNLTKILTRHCSDLSLNFAAQRCPNLQ 394 TRF S ES WWTPEFE K+DS LRSV+ S G LT+I RHC++ SL++AA+RCPNL+ Sbjct 68 TRFLSFPESINWWTPEFEDKVDSFLRSVVDRSEGGLTEIRIRHCTERSLSYAAERCPNLE 127 Query 395 SSFYK 409 + K Sbjct 128 VLWIK 132 Score = 38.9 bits (89), Expect(3) = 3e-50 Identities = 16/29 (55%), Positives = 25/29 (86%), Gaps = 0/29 (0%) Frame = +3 Query 393 KVLSIKSCPHVTDASIAQVAYHCRNLKQL 479 +VL IK+CP+VTDAS+ ++A +C NL++L Sbjct 127 EVLWIKNCPNVTDASMEKIAMNCPNLREL 155 Score = 35.0 bits (79), Expect(3) = 3e-50 Identities = 15/27 (55%), Positives = 19/27 (70%), Gaps = 0/27 (0%) Frame = +1 Query 469 LNNFDISYCYEISHESLVVIGRNWANL 549 L DISY Y I+HESL+ +GR+ NL Sbjct 152 LRELDISYSYGITHESLITLGRSCQNL 178 >gi|92868841|gb|ABE78800.1| Cyclin-like F-box [Medicago truncatula] Length=302 Score = 147 bits (372), Expect(3) = 1e-47 Identities = 67/111 (60%), Positives = 86/111 (77%), Gaps = 1/111 (0%) Frame = +2 Query 65 SDWAELTHECLVNILSRLTFEHRWTGPMLVCKPWLNACKD-PTLNSVFDLETRFDSSAES 241 ++W ELT ECL+NILSRL+FE +W G +LVCK W NA K+ P+L+SVF+L+ FD ES Sbjct 7 AEWGELTRECLINILSRLSFEDQWRGSLLVCKSWFNAFKEEPSLHSVFNLDPYFDKPLES 66 Query 242 PRWWTPEFERKIDSMLRSVISWSNGNLTKILTRHCSDLSLNFAAQRCPNLQ 394 PRWWT +FE +IDSMLRS++ W++ LT+I RHCSD SL AQRCPNL+ Sbjct 67 PRWWTLQFESQIDSMLRSIVQWTHIFLTQIRIRHCSDRSLALVAQRCPNLE 117 Score = 45.1 bits (105), Expect(3) = 1e-47 Identities = 19/27 (70%), Positives = 23/27 (85%), Gaps = 0/27 (0%) Frame = +1 Query 469 LNNFDISYCYEISHESLVVIGRNWANL 549 L DISYCYEI+HESLV+IGRN +N+ Sbjct 142 LRELDISYCYEITHESLVLIGRNCSNI 168 Score = 38.1 bits (87), Expect(3) = 1e-47 Identities = 16/29 (55%), Positives = 24/29 (82%), Gaps = 0/29 (0%) Frame = +3 Query 393 KVLSIKSCPHVTDASIAQVAYHCRNLKQL 479 +VLSI+SCP VTD S++++A C NL++L Sbjct 117 EVLSIRSCPRVTDDSMSKIATGCPNLREL 145 >gi|18424042|ref|NP_568870.1| UniGene infoGene info SKIP1 (SKP1 INTERACTING PARTNER 1) [Arabidopsis thaliana] gi|9758359|dbj|BAB08860.1| Gene info unnamed protein product [Arabidopsis thaliana] gi|10716947|gb|AAG21976.1| UniGene infoGene info SKP1 interacting partner 1 [Arabidopsis thaliana] gi|109946489|gb|ABG48423.1| Gene info At5g57900 [Arabidopsis thaliana] gi|110738798|dbj|BAF01322.1| Gene info hypothetical protein [Arabidopsis thaliana] Length=300 Score = 148 bits (373), Expect(3) = 1e-47 Identities = 68/110 (61%), Positives = 80/110 (72%), Gaps = 0/110 (0%) Frame = +2 Query 65 SDWAELTHECLVNILSRLTFEHRWTGPMLVCKPWLNACKDPTLNSVFDLETRFDSSAESP 244 SDW L E L+NI+SRLT + WTGPM V K WL C+DP L S+FDLE FDS ES Sbjct 6 SDWGGLAPEILINIISRLTIQELWTGPMFVQKSWLTVCRDPYLWSIFDLEPWFDSYPEST 65 Query 245 RWWTPEFERKIDSMLRSVISWSNGNLTKILTRHCSDLSLNFAAQRCPNLQ 394 W+PEFE+K+D MLRSV+ WS G LTKI RHCSD +L++AA RCPNLQ Sbjct 66 HLWSPEFEQKVDLMLRSVVDWSEGGLTKIRVRHCSDHALSYAADRCPNLQ 115 Score = 42.4 bits (98), Expect(3) = 1e-47 Identities = 18/28 (64%), Positives = 23/28 (82%), Gaps = 0/28 (0%) Frame = +1 Query 466 TLNNFDISYCYEISHESLVVIGRNWANL 549 +L DISYC+EISH++LV+IGRN NL Sbjct 139 SLKELDISYCHEISHDTLVMIGRNCPNL 166 Score = 40.0 bits (92), Expect(3) = 1e-47 Identities = 16/29 (55%), Positives = 26/29 (89%), Gaps = 0/29 (0%) Frame = +3 Query 393 KVLSIKSCPHVTDASIAQVAYHCRNLKQL 479 +VL+I+S P+VTDAS+ ++A+ CR+LK+L Sbjct 115 QVLAIRSSPNVTDASMTKIAFRCRSLKEL 143 >gi|37805883|dbj|BAC99611.1| Gene info putative SKP1 interacting partner 1 [Oryza sativa (japonica cultivar-group)] Length=314 Score = 101 bits (251), Expect(2) = 5e-26 Identities = 50/110 (45%), Positives = 66/110 (60%), Gaps = 2/110 (1%) Frame = +2 Query 68 DWAELTHECLVNILSRLTFEHRWTGPMLVCKPWLNACKD-PTLNSVFDLETRFDS-SAES 241 DW+E+T CL SRL E W G M C+ W +A P L + DLE F S A++ Sbjct 19 DWSEMTPVCLAEAFSRLGLEDVWRGAMACCRAWRDAAASRPALFAALDLEPAFASVGADA 78 Query 242 PRWWTPEFERKIDSMLRSVISWSNGNLTKILTRHCSDLSLNFAAQRCPNL 391 WWTP F+R++D+MLRS S + G L ++ RHCSD +L FAA+R P L Sbjct 79 AEWWTPAFQRRVDAMLRSASSLAAGELREVRVRHCSDDALAFAAERSPKL 128 Score = 36.2 bits (82), Expect(2) = 5e-26 Identities = 15/27 (55%), Positives = 21/27 (77%), Gaps = 0/27 (0%) Frame = +1 Query 469 LNNFDISYCYEISHESLVVIGRNWANL 549 L DISYC+E+S++SL +IG+N NL Sbjct 154 LTELDISYCHEVSYKSLEMIGQNCRNL 180 >gi|92868840|gb|ABE78799.1| SKP1 interacting partner 1-related [Medicago truncatula] Length=140 Score = 42.7 bits (99), Expect(2) = 7e-08 Identities = 18/37 (48%), Positives = 26/37 (70%), Gaps = 0/37 (0%) Frame = +2 Query 284 MLRSVISWSNGNLTKILTRHCSDLSLNFAAQRCPNLQ 394 ML+S++ W++ L +I +HCSD SL AQRC NL+ Sbjct 1 MLQSIVQWTHIFLIQIRIQHCSDRSLTLVAQRCSNLE 37 Score = 33.5 bits (75), Expect(2) = 7e-08 Identities = 13/29 (44%), Positives = 23/29 (79%), Gaps = 0/29 (0%) Frame = +3 Query 393 KVLSIKSCPHVTDASIAQVAYHCRNLKQL 479 ++LSI+S +TD+SI+ +A+ C NL++L Sbjct 37 EILSIRSSLRITDSSISMIAFGCPNLREL 65 >gi|15229043|ref|NP_190457.1| UniGene infoGene info unknown protein [Arabidopsis thaliana] gi|30693105|ref|NP_850671.1| UniGene infoGene info unknown protein [Arabidopsis thaliana] gi|7576226|emb|CAB87916.1| Gene info putative protein [Arabidopsis thaliana] gi|15028347|gb|AAK76650.1| UniGene infoGene info unknown protein [Arabidopsis thaliana] gi|19310705|gb|AAL85083.1| UniGene infoGene info unknown protein [Arabidopsis thaliana] Length=309 Score = 53.9 bits (128), Expect = 4e-07 Identities = 39/126 (30%), Positives = 55/126 (43%), Gaps = 7/126 (5%) Frame = +2 Query 38 ETDTESGLISDWAELTHECLVNILSRLTFEHRWTGPMLVCKPWLNACKDPTLNSVFDLET 217 E + ES + W EL + LV I + + +G VC+ W AC DP L DL Sbjct 2 EEEYESRRLRRWEELDTDILVRIFQKFSVFELTSGLAHVCRGWRAACCDPILWKTVDLSN 61 Query 218 RFDSSAESPRWWTPEFERKIDSMLRSVISWS---NGNLTKILTRH----CSDLSLNFAAQ 376 S + P ER+ D L ++ S +G T+ L H SD L + A+ Sbjct 62 MRSSFIKIPLEPYVYVERRSDEALTRILKLSMNLSGGSTRTLIFHFNLFLSDDQLTYTAE 121 Query 377 RCPNLQ 394 RCP L+ Sbjct 122 RCPGLR 127 >gi|5732066|gb|AAD48965.1|AF147263_7 contains similarity to Medicago truncatula N7 protein (GB:Y17613) [Arabidopsis thaliana] gi|7267310|emb|CAB81092.1| AT4g05500 [Arabidopsis thaliana] Length=449 Score = 52.0 bits (123), Expect = 1e-06 Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 10/113 (8%) Frame = +2 Query 62 ISDWAELTHECLVNILSRLTFEHRWTGPMLVCKPWLNACKDPTLNSVFDLETRFDSSAES 241 + +WAEL + +IL RL VCKPW CKDP++ D++ R D +A Sbjct 178 LRNWAELPSKLTSSILLRLGAIEILQNAQKVCKPWHRVCKDPSMWRKIDIDNRNDRAA-- 235 Query 242 PRWWTPEFERKIDSMLRSVISWSNGNLTKI-LTRHCSDLSLNFAAQRCPNLQS 397 F+ ++SM R + S+G L +I + + ++ + + A R NL+S Sbjct 236 -------FKYDLESMCRHAVDRSHGGLIEIEIWYYGTNDLIMYIADRSSNLKS 281 >gi|3273101|emb|CAA76808.1| UniGene info N7 protein [Medicago truncatula] Length=314 Score = 50.1 bits (118), Expect = 6e-06 Identities = 39/121 (32%), Positives = 60/121 (49%), Gaps = 14/121 (11%) Frame = +2 Query 38 ETDTESGLISDWAELTHECLV-NILSRLTFEHRWTGPMLVCKPWLNACKDPTLNSVFDLE 214 E + +S + +W EL + + NIL RL+ T LVC W N CKDP + + +L Sbjct 6 EVEGDSITVLNWLELPRDIIATNILQRLSITEIITSACLVCPLWWNICKDPLMWRIINL- 64 Query 215 TRFDSSAESPRWWTPEFERKIDSMLRSVISWSNGNLTKI-LTRHCSDLSLNFAAQRCPNL 391 T D+S++ + ++ +D L S GNL +I + CSD L + A R NL Sbjct 65 TILDTSSK-------DLKKIVDYALER----SCGNLEEINIECLCSDGLLKYIANRASNL 113 Query 392 Q 394 + Sbjct 114 R 114 >gi|21618163|gb|AAM67213.1| UniGene info unknown [Arabidopsis thaliana] Length=309 Score = 48.9 bits (115), Expect = 1e-05 Identities = 38/126 (30%), Positives = 54/126 (42%), Gaps = 7/126 (5%) Frame = +2 Query 38 ETDTESGLISDWAELTHECLVNILSRLTFEHRWTGPMLVCKPWLNACKDPTLNSVFDLET 217 E + ES + EL + LV I + + +G VC+ W AC DP L DL Sbjct 2 EEEYESRRLRRCEELDTDILVRIFQKFSVFELTSGLAHVCRGWRAACCDPILWKTVDLSN 61 Query 218 RFDSSAESPRWWTPEFERKIDSMLRSVISWS---NGNLTKILTRH----CSDLSLNFAAQ 376 S + P ER+ D L ++ S +G T+ L H SD L + A+ Sbjct 62 MRSSFIKIPLEPYVYVERRSDEALTRILKLSMNLSGGSTRTLIFHFNLFLSDDQLTYTAE 121 Query 377 RCPNLQ 394 RCP L+ Sbjct 122 RCPGLR 127 >gi|7267308|emb|CAB81090.1| N7-like protein [Arabidopsis thaliana] Length=322 Score = 43.1 bits (100), Expect = 7e-04 Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 13/111 (11%) Frame = +2 Query 68 DWAELTHECLVNILSRLTFEHRWTGPMLVCKPWLNACKDPTLNSVFDLETRFDSSAESPR 247 +W +L E +IL RL+ +C+ W CKDP++ +L Sbjct 39 NWVDLPPELTTSILLRLSVTDILDNARKLCRAWRRICKDPSMWRKINLRDCL-------- 90 Query 248 WWTPEFERKIDSMLRSVISWSNGNLTKILTRH-CSDLSLNFAAQRCPNLQS 397 +E +SM R ++ S G L +I H SD L++ R NL+S Sbjct 91 ----MYEFDFESMCRHIVDLSQGGLLEINIEHFVSDSLLSYIVDRSCNLKS 137 >gi|18412949|ref|NP_567295.1| UniGene infoGene info ubiquitin-protein ligase [Arabidopsis thaliana] Length=576 Score = 43.1 bits (100), Expect = 7e-04 Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 13/111 (11%) Frame = +2 Query 68 DWAELTHECLVNILSRLTFEHRWTGPMLVCKPWLNACKDPTLNSVFDLETRFDSSAESPR 247 +W +L E +IL RL+ +C+ W CKDP++ +L Sbjct 39 NWVDLPPELTTSILLRLSVTDILDNARKLCRAWRRICKDPSMWRKINLRDCL-------- 90 Query 248 WWTPEFERKIDSMLRSVISWSNGNLTKILTRH-CSDLSLNFAAQRCPNLQS 397 +E +SM R ++ S G L +I H SD L++ R NL+S Sbjct 91 ----MYEFDFESMCRHIVDLSQGGLLEINIEHFVSDSLLSYIVDRSCNLKS 137 Score = 35.8 bits (81), Expect = 0.11 Identities = 34/116 (29%), Positives = 48/116 (41%), Gaps = 24/116 (20%) Frame = +2 Query 68 DWAELTHECLVNILSRLTFEHRWTGPMLVCKPWLNACKDPT----LNSVFDLETRFDSSA 235 +W +L E +IL RL+ VCK W CKDP+ +N+ L FD Sbjct 317 NWVDLPPELTTSILLRLSLTDILDNAQKVCKEWRRICKDPSMWRKINTRDCLMYNFD--- 373 Query 236 ESPRWWTPEFERKIDSMLRSVISWSNGNLTKI-LTRH-CSDLSLNFAAQRCPNLQS 397 SM R ++ S G L +I + H SD L++ R NL+S Sbjct 374 -------------FVSMCRHIVDLSQGGLLEINVDEHFLSDSLLSYITDR--NLRS 414 >gi|18413178|ref|NP_567343.1| UniGene infoGene info ubiquitin-protein ligase [Arabidopsis thaliana] gi|30680931|ref|NP_849346.1| UniGene infoGene info ubiquitin-protein ligase [Arabidopsis thaliana] gi|42572853|ref|NP_974523.1| UniGene infoGene info ubiquitin-protein ligase [Arabidopsis thaliana] gi|4325371|gb|AAD17367.1| Gene info contains similarity to Medicago truncatula N7 protein (GB:Y17613) [Arabidopsis thaliana] gi|7267540|emb|CAB78022.1| Gene info putative protein [Arabidopsis thaliana] gi|21536818|gb|AAM61150.1| UniGene infoGene info F-box protein family, AtFBW2 [Arabidopsis thaliana] gi|27311651|gb|AAO00791.1| UniGene infoGene info F-box protein family, AtFBW2 [Arabidopsis thaliana] gi|30984530|gb|AAP42728.1| UniGene infoGene info At4g08980 [Arabidopsis thaliana] Length=317 Score = 35.8 bits (81), Expect(2) = 7e-04 Identities = 32/112 (28%), Positives = 47/112 (41%), Gaps = 14/112 (12%) Frame = +2 Query 71 WAELTHECLVNILSRLTFEHRWTGPMLVCKPWLNACKDPTLNSVFDLETRFDSSAESPRW 250 W EL + L I S L + T VCK W A P D+E Sbjct 10 WDELIPDALGLIFSHLPLQEVLTVVPRVCKAWNRAVTGPYCWQEIDIEL----------- 58 Query 251 WTPEFERK--IDSMLRSVISWSNGNLTKI-LTRHCSDLSLNFAAQRCPNLQS 397 W+ F + +D ML +I S G+L K+ +T +D +F AQ +L++ Sbjct 59 WSNRFHQSDHLDRMLEMLIPRSAGSLRKLSVTGLRNDSIFSFIAQHAGSLKT 110 Score = 26.6 bits (57), Expect(2) = 7e-04 Identities = 11/33 (33%), Positives = 20/33 (60%), Gaps = 0/33 (0%) Frame = +1 Query 460 VGTLNNFDISYCYEISHESLVVIGRNWANLTXF 558 + +L D+SYC +I E++ IG++ +L F Sbjct 130 LSSLTFLDLSYCCKIGPEAIQAIGKHCKSLREF 162 >gi|115454265|ref|NP_001050733.1| Gene info Os03g0638900 [Oryza sativa (japonica cultivar-group)] gi|37718854|gb|AAR01725.1| Gene info hypothetical protein [Oryza sativa (japonica cultivar-group)] gi|50540705|gb|AAT77862.1| Gene info expressed protein [Oryza sativa (japonica cultivar-group)] gi|108710013|gb|ABF97808.1| Gene info F-box domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] gi|113549204|dbj|BAF12647.1| Gene info Os03g0638900 [Oryza sativa (japonica cultivar-group)] Length=294 Score = 42.7 bits (99), Expect = 9e-04 Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Frame = +2 Query 71 WAELTHECLVNILSRLTFEHRWTGPMLVCKPWLNACKDPTLNSVFDLETRFDSSAESPRW 250 WAEL +CLV++ RL + + LVC+ W A DP+L DL R D A W Sbjct 14 WAELPTDCLVHVFRRLDLDELASAAPLVCRGWRRAAADPSLWRALDL--RRDHLARFMPW 71 >gi|115482802|ref|NP_001064994.1| Gene info Os10g0502900 [Oryza sativa (japonica cultivar-group)] gi|78708871|gb|ABB47846.1| Gene info F-box domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] gi|113639603|dbj|BAF26908.1| Gene info Os10g0502900 [Oryza sativa (japonica cultivar-group)] Length=321 Score = 42.7 bits (99), Expect = 9e-04 Identities = 29/115 (25%), Positives = 57/115 (49%), Gaps = 8/115 (6%) Frame = +2 Query 71 WAELTHECLVNILSRLTFEHRWTGPMLVCKPWLNACKDPTLNSVFD---LETRFDSSAES 241 W ++ + LV I L + VC+ W AC DP + S D L++ + + S Sbjct 11 WEDMDTDVLVKIFKELNLVEL-SPVSQVCRLWHLACSDPLIWSTLDFGLLKSNYIQTRAS 69 Query 242 PRWWTPE-FERKIDSMLRSVISWSNGNLTKIL---TRHCSDLSLNFAAQRCPNLQ 394 P W + ++++ +LR +S S GN++ ++ + D L++ ++R P+L+ Sbjct 70 PYIWVDDRSDKRLSRILRVAMSISYGNVSCLIFHYNLYMKDEHLHYISERSPHLK 124 >gi|21593361|gb|AAM65310.1| UniGene info F-box protein family, AtFBL20 [Arabidopsis thaliana] Length=302 Score = 42.4 bits (98), Expect = 0.001 Identities = 32/117 (27%), Positives = 47/117 (40%), Gaps = 10/117 (8%) Frame = +2 Query 50 ESGLISDWAELTHECLVNILSRLTFEHRWTGPMLVCKPWLNACKDPTLNSVFDLETRFDS 229 E G ++W EL E IL RL VC+ W CKDP++ D+ D Sbjct 12 EVGESTNWTELPPELTSAILHRLGAIEILENAQKVCRSWRRVCKDPSMWRKIDMHNLGD- 70 Query 230 SAESPRWWTPEFERKIDSMLRSVISWSNGNLTKILTRHCSDLS-LNFAAQRCPNLQS 397 + + ++ M R + S G L I + + LN+ A R NL+S Sbjct 71 --------LDDMDYNLEIMCRHAVDRSQGGLVDIGIWYFGTVDLLNYIAHRSSNLRS 119 >gi|18412947|ref|NP_567294.1| UniGene infoGene info ubiquitin-protein ligase [Arabidopsis thaliana] gi|7267306|emb|CAB81088.1| Gene info N7 like-protein [Arabidopsis thaliana] gi|27765050|gb|AAO23646.1| UniGene infoGene info At4g05460 [Arabidopsis thaliana] gi|110742947|dbj|BAE99368.1| Gene info N7 like-protein [Arabidopsis thaliana] Length=302 Score = 42.4 bits (98), Expect = 0.001 Identities = 32/117 (27%), Positives = 47/117 (40%), Gaps = 10/117 (8%) Frame = +2 Query 50 ESGLISDWAELTHECLVNILSRLTFEHRWTGPMLVCKPWLNACKDPTLNSVFDLETRFDS 229 E G ++W EL E IL RL VC+ W CKDP++ D+ D Sbjct 12 EVGESTNWTELPPELTSAILHRLGAIEILENAQKVCRSWRRVCKDPSMWRKIDMHNLGD- 70 Query 230 SAESPRWWTPEFERKIDSMLRSVISWSNGNLTKILTRHCSDLS-LNFAAQRCPNLQS 397 + + ++ M R + S G L I + + LN+ A R NL+S Sbjct 71 --------LDDMDYNLEIMCRHAVDRSQGGLVDIGIWYFGTVDLLNYIAHRSSNLRS 119 >gi|30692594|ref|NP_849530.1| UniGene infoGene info unknown protein [Arabidopsis thaliana] gi|5732065|gb|AAD48964.1|AF147263_6 Gene info contains similarity to Medicago truncatula N7 protein (GB:Y17613) [Arabidopsis thaliana] Length=246 Score = 38.9 bits (89), Expect(2) = 0.002 Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 7/116 (6%) Frame = +2 Query 50 ESGLISDWAELTHECLVNILSRLTFEHRWTGPMLVCKPWLNACKDPTLNSVFDLETRFDS 229 ++G +WAEL E +IL RL VCK W C+DP++ D+ + ++ Sbjct 14 KNGEYRNWAELPPELTSSILLRLGAIEILQNAQRVCKSWRRVCQDPSMWRKIDIRIK-EN 72 Query 230 SAESPRWWTPEFERKIDSMLRSVISWSNGNLTKILTRHCSDLS-LNFAAQRCPNLQ 394 S E I+ + + S G L +I + + S LN+ A R NL+ Sbjct 73 LVNS-----VELFYVIEPLCCRAVDLSQGGLLEINIDYLVNTSFLNYIADRSSNLR 123 Score = 22.3 bits (46), Expect(2) = 0.002 Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 0/27 (0%) Frame = +1 Query 469 LNNFDISYCYEISHESLVVIGRNWANL 549 L DI+Y I + L V+G++ NL Sbjct 148 LEELDITYKSSIREQELKVVGQSCPNL 174 >gi|7267307|emb|CAB81089.1| N7-like protein [Arabidopsis thaliana] Length=304 Score = 38.5 bits (88), Expect = 0.017 Identities = 41/136 (30%), Positives = 56/136 (41%), Gaps = 27/136 (19%) Frame = +2 Query 17 RVKKEHGETDTESGLISD---WAELTHECLVNILSRLTFEHRWTGPMLVCKPWLNACKDP 187 R KK T ES L+ + W +L E +IL RL+ VCK W CKDP Sbjct 25 RNKKTTTSTTLESLLMKERRNWVDLPPELTTSILLRLSLTDILDNAQKVCKEWRRICKDP 84 Query 188 T----LNSVFDLETRFDSSAESPRWWTPEFERKIDSMLRSVISWSNGNLTKI-LTRH-CS 349 + +N+ L FD SM R ++ S G L +I + H S Sbjct 85 SMWRKINTRDCLMYNFD----------------FVSMCRHIVDLSQGGLLEINVDEHFLS 128 Query 350 DLSLNFAAQRCPNLQS 397 D L++ R NL+S Sbjct 129 DSLLSYITDR--NLRS 142 >gi|51090940|dbj|BAD35544.1| putative F-box protein Fbl2 [Oryza sativa (japonica cultivar-group)] Length=627 Score = 38.5 bits (88), Expect = 0.017 Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 4/57 (7%) Frame = +3 Query 378 GVQISKVLSIKSCPHVTDASIAQVAYHCRNLKQLRHQLLLRNIARIFGGNWXELGQS 548 G+Q + +S+ SCP VTD ++A +A C +LKQL L+ ++ G + +S Sbjct 330 GLQKLRFMSVSSCPGVTDLALASIAKFCPSLKQLN----LKKCGQVSDGRLKDFAES 382 >gi|108862944|gb|ABA99360.2| F-box domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] Length=290 Score = 37.4 bits (85), Expect = 0.037 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 0/63 (0%) Frame = +2 Query 62 ISDWAELTHECLVNILSRLTFEHRWTGPMLVCKPWLNACKDPTLNSVFDLETRFDSSAES 241 ++ W ++ +CLV I RL + LVC+ W A +D +L DL ++A Sbjct 12 VARWGDMDADCLVEIFRRLPLDDVAAAAPLVCRSWRAAARDASLWRALDLRGGGGAAARF 71 Query 242 PRW 250 W Sbjct 72 MPW 74 >gi|115475640|ref|NP_001061416.1| Gene info Os08g0269800 [Oryza sativa (japonica cultivar-group)] gi|113623385|dbj|BAF23330.1| Gene info Os08g0269800 [Oryza sativa (japonica cultivar-group)] Length=197 Score = 36.2 bits (82), Expect = 0.083 Identities = 15/27 (55%), Positives = 21/27 (77%), Gaps = 0/27 (0%) Frame = +1 Query 469 LNNFDISYCYEISHESLVVIGRNWANL 549 L DISYC+E+S++SL +IG+N NL Sbjct 37 LTELDISYCHEVSYKSLEMIGQNCRNL 63 >gi|92873243|gb|ABE81734.1| Cyclin-like F-box [Medicago truncatula] gi|92874627|gb|ABE82864.1| Cyclin-like F-box [Medicago truncatula] Length=92 Score = 36.2 bits (82), Expect = 0.083 Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 0/46 (0%) Frame = +2 Query 50 ESGLISDWAELTHECLVNILSRLTFEHRWTGPMLVCKPWLNACKDP 187 ES +W EL + NIL RL T VC W N CKDP Sbjct 12 ESTKNPNWVELPKDITSNILQRLNTVEILTKTRYVCPYWWNICKDP 57 >gi|18414458|ref|NP_567467.1| UniGene infoGene info ubiquitin-protein ligase [Arabidopsis thaliana] gi|13430832|gb|AAK26038.1|AF360328_1 UniGene infoGene info putative F-box protein family, AtFBL4 [Arabidopsis thaliana] gi|13605655|gb|AAK32821.1|AF361808_1 UniGene infoGene info AT4g15470/dl3775w [Arabidopsis thaliana] gi|15810599|gb|AAL07187.1| UniGene infoGene info putative F-box protein family protein FBL4 [Arabidopsis thaliana] Length=610 Score = 29.6 bits (65), Expect(2) = 0.085 Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 0/35 (0%) Frame = +3 Query 375 KGVQISKVLSIKSCPHVTDASIAQVAYHCRNLKQL 479 KG + ++L + C + D ++ +A CRNLK+L Sbjct 395 KGCKSLEILHLVDCSGIGDIAMCSIAKGCRNLKKL 429 Score = 25.4 bits (54), Expect(2) = 0.085 Identities = 10/28 (35%), Positives = 17/28 (60%), Gaps = 0/28 (0%) Frame = +1 Query 469 LNNFDISYCYEISHESLVVIGRNWANLT 552 L I CYEI ++ ++ IG++ +LT Sbjct 426 LKKLHIRRCYEIGNKGIISIGKHCKSLT 453 >gi|87240622|gb|ABD32480.1| Cyclin-like F-box [Medicago truncatula] Length=229 Score = 35.8 bits (81), Expect = 0.11 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 0/42 (0%) Frame = +2 Query 68 DWAELTHECLVNILSRLTFEHRWTGPMLVCKPWLNACKDPTL 193 +W +L + NIL RL T LVC W N CK+P + Sbjct 31 NWLDLPRDITQNILQRLNAVEIVTSASLVCALWWNICKEPLM 72 >gi|115445787|ref|NP_001046673.1| Gene info Os02g0317500 [Oryza sativa (japonica cultivar-group)] gi|46389934|dbj|BAD15718.1| Gene info putative N7 protein [Oryza sativa (japonica cultivar-group)] gi|50251726|dbj|BAD27646.1| Gene info putative N7 protein [Oryza sativa (japonica cultivar-group)] gi|113536204|dbj|BAF08587.1| Gene info Os02g0317500 [Oryza sativa (japonica cultivar-group)] Length=330 Score = 35.8 bits (81), Expect = 0.11 Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 14/112 (12%) Frame = +2 Query 68 DWAELTHECLVNILSRLTFEHRWTGPMLVCKPWLNAC-KDPTLNSVFDLETRFDSSAESP 244 +WA+L + ++ + RL G +VC+ WL A ++P L DL FD + + Sbjct 10 EWADLPVDAVLAVFERLGAAEVLMGAGVVCRSWLRAATREPRLWRRVDLTACFDPTVD-- 67 Query 245 RWWTPEFERKIDSMLRSVISWSNGNLTKILT-RHCSDLSLNFAAQRCPNLQS 397 +++M R+ + + G L R +D L + A+R L+S Sbjct 68 ----------MEAMARAAVDRAGGRLEHFAAERFVTDELLLYVAKRTSCLKS 109 >gi|40253645|dbj|BAD05588.1| Gene info F-box protein-like [Oryza sativa (japonica cultivar-group)] gi|40253816|dbj|BAD05753.1| Gene info F-box protein-like [Oryza sativa (japonica cultivar-group)] Length=319 Score = 35.4 bits (80), Expect = 0.14 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 0/48 (0%) Frame = +2 Query 68 DWAELTHECLVNILSRLTFEHRWTGPMLVCKPWLNACKDPTLNSVFDL 211 DW+EL + L + ++L G LVC+PWL+A K P L D+ Sbjct 16 DWSELPVDALSVVFAKLGAVEVLMGAGLVCRPWLDATKLPHLWRCVDI 63 >gi|115444885|ref|NP_001046222.1| Gene info Os02g0200900 [Oryza sativa (japonica cultivar-group)] gi|46390386|dbj|BAD15850.1| Gene info putative F-box protein [Oryza sativa (japonica cultivar-group)] gi|113535753|dbj|BAF08136.1| Gene info Os02g0200900 [Oryza sativa (japonica cultivar-group)] Length=511 Score = 34.3 bits (77), Expect = 0.32 Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%) Frame = +3 Query 333 LPVTAPI-FLSTSPLKGVQISKVLSIKSCPHVTDASIAQVAYHCRNLKQL 479 LPV A F + G+Q + +S+ SCP VT+ ++A +A C +L+QL Sbjct 197 LPVVAERGFWVMANAAGLQNLRCMSVTSCPGVTNLALAAIAKFCPSLRQL 246 Score = 30.4 bits (67), Expect = 4.6 Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 0/27 (0%) Frame = +3 Query 399 LSIKSCPHVTDASIAQVAYHCRNLKQL 479 L+IK CP TDAS+A V C L+Q+ Sbjct 326 LTIKDCPDFTDASLAVVGMVCPYLEQV 352 >gi|46390385|dbj|BAD15849.1| Gene info putative F-box protein [Oryza sativa (japonica cultivar-group)] Length=660 Score = 34.3 bits (77), Expect = 0.32 Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%) Frame = +3 Query 333 LPVTAPI-FLSTSPLKGVQISKVLSIKSCPHVTDASIAQVAYHCRNLKQL 479 LPV A F + G+Q + +S+ SCP VT+ ++A +A C +L+QL Sbjct 346 LPVVAERGFWVMANAAGLQNLRCMSVTSCPGVTNLALAAIAKFCPSLRQL 395 Score = 30.4 bits (67), Expect = 4.6 Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 0/27 (0%) Frame = +3 Query 399 LSIKSCPHVTDASIAQVAYHCRNLKQL 479 L+IK CP TDAS+A V C L+Q+ Sbjct 475 LTIKDCPDFTDASLAVVGMVCPYLEQV 501 >gi|38637149|dbj|BAD03402.1| Gene info hypothetical protein [Oryza sativa (japonica cultivar-group)] Length=258 Score = 34.3 bits (77), Expect = 0.32 Identities = 34/128 (26%), Positives = 51/128 (39%), Gaps = 12/128 (9%) Frame = +2 Query 14 WRVKKEHGETDTESGLISDWAELTHECLVNILSRLTFEHRWTGPMLVCKPWLNACKDPTL 193 WR + E ES DW+EL + I ++L G LVC WL+A K P L Sbjct 5 WRNQMESMLLPPES---RDWSELPMDAFSVIFAKLGAIELLMGAGLVCHSWLHAAKLPHL 61 Query 194 NSVFDLETRFDSSAESPRWWTPEFERKIDSMLRSVISWSNGNLTKILTR-HCSDLSLNFA 370 ++ S + P + M R+ + S+G L + +D LN+ Sbjct 62 WQCVEMVHHEALSLKEP--------IVMSEMARAAVDRSDGRLEAFEGQWFVNDGLLNYI 113 Query 371 AQRCPNLQ 394 R P L+ Sbjct 114 RDRSPKLK 121 >gi|40253666|dbj|BAD05609.1| Gene info putative N7 protein [Oryza sativa (japonica cultivar-group)] Length=333 Score = 32.7 bits (73), Expect = 0.92 Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 2/56 (3%) Frame = +2 Query 44 DTESGLISDWAELTHECLVNILSRLTFEHRWTGPMLVCKPWLNACKDPTLNSVFDL 211 DT+S DW+EL + L I ++L G VC WL A K P L D+ Sbjct 10 DTDSD--RDWSELPVDALSAIFTKLGTVEILMGASFVCHSWLAASKSPELWRFVDM 63 >gi|38637143|dbj|BAD03396.1| Gene info F-box protein family-like [Oryza sativa (japonica cultivar-group)] Length=253 Score = 32.7 bits (73), Expect = 0.92 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 0/57 (0%) Frame = +2 Query 41 TDTESGLISDWAELTHECLVNILSRLTFEHRWTGPMLVCKPWLNACKDPTLNSVFDL 211 T E+ DW+EL + L + ++L G +VC WL+A K P L D+ Sbjct 9 TPPETTTTRDWSELPVDVLSVVFAKLGAAEILMGAGIVCSSWLHAAKLPHLWRCVDI 65 >gi|21536497|gb|AAM60829.1| UniGene info F-box protein family, AtFBL4 [Arabidopsis thaliana] Length=610 Score = 29.6 bits (65), Expect(2) = 1.1 Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 0/35 (0%) Frame = +3 Query 375 KGVQISKVLSIKSCPHVTDASIAQVAYHCRNLKQL 479 KG + ++L + C + D ++ +A CRNLK+L Sbjct 395 KGCKSLEILHLVDCSGIGDIAMCSIAKGCRNLKKL 429 Score = 21.6 bits (44), Expect(2) = 1.1 Identities = 9/28 (32%), Positives = 16/28 (57%), Gaps = 0/28 (0%) Frame = +1 Query 469 LNNFDISYCYEISHESLVVIGRNWANLT 552 L I YEI ++ ++ IG++ +LT Sbjct 426 LKKLHIRRXYEIGNKGIISIGKHCKSLT 453 >gi|115475167|ref|NP_001061180.1| Gene info Os08g0193500 [Oryza sativa (japonica cultivar-group)] gi|40253668|dbj|BAD05611.1| Gene info glutamic acid-rich protein precursor-like protein [Oryza sativa (japonica cultivar-group)] gi|113623149|dbj|BAF23094.1| Gene info Os08g0193500 [Oryza sativa (japonica cultivar-group)] Length=447 Score = 32.3 bits (72), Expect = 1.2 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 0/44 (0%) Frame = +2 Query 62 ISDWAELTHECLVNILSRLTFEHRWTGPMLVCKPWLNACKDPTL 193 + DW++L + L I +L G LVC WL A K P L Sbjct 13 VRDWSDLPTDALSTIFMKLGSIEVLMGAGLVCHSWLAAAKSPEL 56 >gi|115445783|ref|NP_001046671.1| Gene info Os02g0317300 [Oryza sativa (japonica cultivar-group)] gi|46389931|dbj|BAD15715.1| Gene info putative N7 protein [Oryza sativa (japonica cultivar-group)] gi|113536202|dbj|BAF08585.1| Gene info Os02g0317300 [Oryza sativa (japonica cultivar-group)] Length=328 Score = 32.0 bits (71), Expect = 1.6 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 4/67 (5%) Frame = +2 Query 29 EHGETDTESGLISDWAELTHECLVNILSRLTFEHRWTGPMLVCKPWLN-ACKDPTLNSVF 205 E E + ES DWAE+ + L + +L G +VC+ W A DPTL Sbjct 11 EMAEGEVES---RDWAEMPSDALAAVFGKLDVTDLLVGAGVVCRAWRRLAAIDPTLWRRV 67 Query 206 DLETRFD 226 D+ + D Sbjct 68 DMSHQGD 74 >gi|92890264|gb|ABE90278.1| Leucine Rich Repeat, putative [Medicago truncatula] gi|92893068|gb|ABE91582.1| Cyclin-like F-box [Medicago truncatula] Length=643 Score = 26.9 bits (58), Expect(2) = 1.7 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 0/34 (0%) Frame = +3 Query 378 GVQISKVLSIKSCPHVTDASIAQVAYHCRNLKQL 479 G Q + L + CP ++D ++ VA C NL +L Sbjct 213 GCQKLEKLDLCKCPAISDKALITVAKKCPNLTEL 246 Score = 23.5 bits (49), Expect(2) = 1.7 Identities = 38/150 (25%), Positives = 58/150 (38%), Gaps = 30/150 (20%) Frame = +2 Query 8 GTWRVKKEHGETDTESGLISDWAELTHECLVNILSRLTFEHRWTGPMLVCKPWL----NA 175 G W +K+ +T ES L ECL I RL + V K WL N Sbjct 54 GEWFEQKQ--KTSIES--------LPDECLFEIFRRLPVGEERSASACVSKRWLMLLSNI 103 Query 176 CKD---PTLNSVFDLETRFDSSAE---SPRWWTPEFERKIDSMLR----SVISWSNGNLT 325 CK ++ + E + + +E + + E K + +R +V + S G L Sbjct 104 CKSEICSNKSTSSNDENKMECDSEEFGGEGYLSRSLEGKKATDVRLAAIAVGTASRGGLG 163 Query 326 KILTRHCSD------LSLNFAAQRCPNLQS 397 K+ R + L L A CP+L+S Sbjct 164 KLSIRGSNSERGVTTLGLKAVASGCPSLKS 193 >gi|18412951|ref|NP_567296.1| UniGene infoGene info ubiquitin-protein ligase [Arabidopsis thaliana] gi|7267309|emb|CAB81091.1| Gene info N7-like protein [Arabidopsis thaliana] Length=307 Score = 31.6 bits (70), Expect = 2.0 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 0/43 (0%) Frame = +2 Query 65 SDWAELTHECLVNILSRLTFEHRWTGPMLVCKPWLNACKDPTL 193 S+WAEL + L +IL RL+ VC+ W KDP + Sbjct 25 SNWAELPPDLLSSILLRLSPLEILENARKVCRSWRRVSKDPLI 67 >gi|92879367|gb|ABE85496.1| Cyclin-like F-box [Medicago truncatula] Length=223 Score = 31.2 bits (69), Expect = 2.7 Identities = 26/93 (27%), Positives = 37/93 (39%), Gaps = 5/93 (5%) Frame = +2 Query 53 SGLISDWAELTHECLVNILSRLTFEHRWTGPMLVCKPWLNACKDPTLNSVFDLETRFDSS 232 S + +W EL + NIL RL VC W N KDP + + T F S Sbjct 4 SSVQPNWLELPRDVTANILQRLGAIEILASACQVCPLWWNIFKDPHMWHTVHI-TNFRYS 62 Query 233 AESPRWWTPEFERKIDSMLRSVISWSNGNLTKI 331 SP + + + R+ ++ S G L I Sbjct 63 PCSPY----NYGDNLTKICRNAVARSCGQLEDI 91 >gi|18421172|ref|NP_568502.1| UniGene infoGene info ubiquitin-protein ligase [Arabidopsis thaliana] gi|26449578|dbj|BAC41915.1| UniGene infoGene info unknown protein [Arabidopsis thaliana] gi|29028992|gb|AAO64875.1| UniGene infoGene info At5g27920 [Arabidopsis thaliana] Length=642 Score = 31.2 bits (69), Expect = 2.7 Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 0/30 (0%) Frame = +3 Query 393 KVLSIKSCPHVTDASIAQVAYHCRNLKQLR 482 K L++ C VTD +I+ VA CRNL L+ Sbjct 354 KTLNLACCGFVTDVAISAVAQSCRNLGTLK 383 >gi|82734614|gb|ABB89717.1| Gene info EIN3-binding F-box protein 1 [Solanum lycopersicum] gi|83584402|gb|ABC24971.1| Gene info EIN3-binding F-box protein 1 [Lycopersicon esculentum] Length=637 Score = 30.8 bits (68), Expect = 3.5 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 0/41 (0%) Frame = +3 Query 357 LSTSPLKGVQISKVLSIKSCPHVTDASIAQVAYHCRNLKQL 479 L TS L + + LSI+SCP +S+A V C L QL Sbjct 440 LQTSMLSPCESLRSLSIRSCPGFGSSSLAMVGKLCPKLHQL 480 >gi|115486379|ref|NP_001068333.1| Gene info Os11g0637300 [Oryza sativa (japonica cultivar-group)] gi|77552121|gb|ABA94918.1| Gene info F-box domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] gi|113645555|dbj|BAF28696.1| Gene info Os11g0637300 [Oryza sativa (japonica cultivar-group)] Length=252 Score = 30.8 bits (68), Expect = 3.5 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Frame = +2 Query 38 ETDTESGLISDWAELTHECLVNILSRLTFEHRWTGPMLVCKPWLNACKDPTLNSVFDL 211 ET +G DW+EL + L + +++ G L C+ WL+A + P L D+ Sbjct 13 ETTAPAG--RDWSELPADVLSVVFAKVGAVEVLAGAGLACRSWLDAARVPELWRAVDM 68 >gi|15222749|ref|NP_175955.1| UniGene infoGene info unknown protein [Arabidopsis thaliana] gi|8778504|gb|AAF79512.1|AC002328_20 Gene info F20N2.2 [Arabidopsis thaliana] gi|20856547|gb|AAM26672.1| UniGene infoGene info At1g55590/F20N2_18 [Arabidopsis thaliana] gi|24111385|gb|AAN46816.1| UniGene infoGene info At1g55590/F20N2_18 [Arabidopsis thaliana] Length=607 Score = 30.8 bits (68), Expect = 3.5 Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 5/55 (9%) Frame = +3 Query 351 IFLSTSPLKGVQISKVLSIKSCPHVTDASIAQVAYHCRNLK--QLRHQLLLRNIA 509 IFL + KG++ + + P V+DA A + + CRNLK ++R LL ++A Sbjct 303 IFLLSEACKGLESVR---LGGFPKVSDAGFASLLHSCRNLKKFEVRGAFLLSDLA 354 >gi|38637157|dbj|BAD03410.1| Gene info hypothetical protein [Oryza sativa (japonica cultivar-group)] gi|38637428|dbj|BAD03685.1| Gene info hypothetical protein [Oryza sativa (japonica cultivar-group)] Length=302 Score = 30.8 bits (68), Expect = 3.5 Identities = 29/112 (25%), Positives = 45/112 (40%), Gaps = 7/112 (6%) Frame = +2 Query 68 DWAELTHECLVNILSRLTFEHRWTGPMLVCKPWLNACKD-PTLNSVFDLETRFDSSAESP 244 DWAEL + ++ + L G L C+ W A +D P L D+ A P Sbjct 38 DWAELPVDAILQVFRWLDHVDILMGAGLACQSWRAAARDEPALWRRIDMR----GFACLP 93 Query 245 RWWTPEFERKIDSMLRSVISWSNGNLTKILTR-HCSDLSLNFAAQRCPNLQS 397 +W + +M R + S+G + ++ D L F A P L+S Sbjct 94 -YWQRHRRDTVRAMAREAVRRSDGRCEEFWSKVGGDDEVLQFLADHAPYLRS 144 >gi|13619398|emb|CAC36384.1| UniGene info hypothetical protein [Arabidopsis thaliana] Length=601 Score = 30.8 bits (68), Expect = 3.5 Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 5/55 (9%) Frame = +3 Query 351 IFLSTSPLKGVQISKVLSIKSCPHVTDASIAQVAYHCRNLK--QLRHQLLLRNIA 509 IFL + KG++ + + P V+DA A + + CRNLK ++R LL ++A Sbjct 297 IFLLSEACKGLESVR---LGGFPKVSDAGFASLLHSCRNLKKFEVRGAFLLSDLA 348 >gi|115464113|ref|NP_001055656.1| Gene info Os05g0437900 [Oryza sativa (japonica cultivar-group)] gi|46981293|gb|AAT07611.1| Gene info putative tubby protein [Oryza sativa (japonica cultivar-group)] gi|55733806|gb|AAV59313.1| Gene info putative tubby protein [Oryza sativa (japonica cultivar-group)] gi|113579207|dbj|BAF17570.1| Gene info Os05g0437900 [Oryza sativa (japonica cultivar-group)] Length=445 Score = 30.4 bits (67), Expect = 4.6 Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 7/67 (10%) Frame = +2 Query 65 SDWAELTHECLVNILSRL-TFEHRWTGPM------LVCKPWLNACKDPTLNSVFDLETRF 223 S WA L E L +++ RL E W VCK W CK+ L+ F + F Sbjct 57 SRWASLPPELLRDVIRRLEASESTWPSRKDVVSCAAVCKAWREMCKEIVLSPEFCGKLTF 116 Query 224 DSSAESP 244 S + P Sbjct 117 PLSLKQP 123 >gi|31249728|gb|AAP46221.1| Gene info hypothetical protein [Oryza sativa (japonica cultivar-group)] Length=150 Score = 30.4 bits (67), Expect = 4.6 Identities = 26/87 (29%), Positives = 33/87 (37%), Gaps = 9/87 (10%) Frame = +1 Query 37 GNRHRVWTHLRLGRVNPRVPRQHPFTTHFRAPMDGPYACLQTMAQRLQGSHSKLRVRSRN 216 G+ R R G V + PR +P T H P+ + GSH RV +R Sbjct 36 GDTRRGSEETRGGGVTEQQPRNYPATNH------NPHG--SNPGRAPPGSHPPTRVTTRQ 87 Query 217 SVRFLRRVTPLVDPRVRKKNRLHAPIR 297 TP P + RLHAP R Sbjct 88 RTE-TETSTPAPPPVGPPRQRLHAPAR 113 >gi|5817396|gb|AAD52732.1|AF123674_1 NADH dehydrogenase [Amphianthus pusillus] Length=700 Score = 30.4 bits (67), Expect = 4.6 Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Frame = +1 Query 166 AQRLQGSHSKLRVRSRNSVRFLRRVTPLVDPRVRKKNRLHAPIRYI-MEQRQSNQDPY 336 ++R+ S LR+ + FL++ T D VRK+N++ + I + + ++ N PY Sbjct 476 SKRINKKFSLLRINDNENSSFLKKKTYRSDYNVRKRNKIGSFINIVRSDNKKKNSYPY 533 >gi|18412177|ref|NP_567255.1| UniGene infoGene info GRH1 (GRR1-LIKE PROTEIN 1); ubiquitin-protein ligase [Arabidopsis thaliana] gi|4262147|gb|AAD14447.1| Gene info putative homolog of transport inhibitor response 1 [Arabidopsis thaliana] gi|7270189|emb|CAB77804.1| Gene info putative homolog of transport inhibitor response 1 [Arabidopsis thaliana] gi|23297438|gb|AAN12969.1| UniGene infoGene info putative F-box protein AtFBL18 [Arabidopsis thaliana] Length=585 Score = 30.4 bits (67), Expect = 4.6 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 3/46 (6%) Frame = +3 Query 393 KVLSIKSCPHVTDASIAQVAYHCRNLKQLRHQLLLRNIARIFGGNW 530 KVL + SC + IA +A CRNL+ L L I GG+W Sbjct 129 KVLVLTSCEGFSTDGIAAIAATCRNLRVLE---LRECIVEDLGGDW 171 >gi|15027885|gb|AAK76473.1| UniGene info putative F-box protein GRR1 protein 1, AtFBL18 [Arabidopsis thaliana] Length=585 Score = 30.4 bits (67), Expect = 4.6 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 3/46 (6%) Frame = +3 Query 393 KVLSIKSCPHVTDASIAQVAYHCRNLKQLRHQLLLRNIARIFGGNW 530 KVL + SC + IA +A CRNL+ L L I GG+W Sbjct 129 KVLVLTSCEGFSTDGIAAIAATCRNLRVLE---LRECIVEDLGGDW 171 >gi|12658970|gb|AAK01147.1|AF291816_1 UniGene info GRR1-like protein 1 [Arabidopsis thaliana] Length=585 Score = 30.4 bits (67), Expect = 4.6 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 3/46 (6%) Frame = +3 Query 393 KVLSIKSCPHVTDASIAQVAYHCRNLKQLRHQLLLRNIARIFGGNW 530 KVL + SC + IA +A CRNL+ L L I GG+W Sbjct 129 KVLVLTSCEGFSTDGIAAIASTCRNLRVLE---LRECIVEDLGGDW 171 >gi|18396373|ref|NP_564288.1| UniGene infoGene info alpha-mannosidase/ calcium ion binding / mannosyl-oligosaccharide 1,2-alpha-mannosidase [Arabidopsis thaliana] gi|5668763|gb|AAD45990.1|AC005916_2 Gene info Similar to gb|U04299 mannosyl-oligosaccharide alpha-1,2-mannosidase from Mus musculus. ESTs gb|R84145 and gb|AA394707 come from this gene. [Arabidopsis thaliana] gi|15912209|gb|AAL08238.1| UniGene infoGene info At1g27520/T17H3_2 [Arabidopsis thaliana] Length=574 Score = 30.0 bits (66), Expect = 5.9 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 0/61 (0%) Frame = -3 Query 291 RSMESIFLSNSGVHQRGDSAEESNRVSRSNTEFRVGSLQALSHGLQTSIGPVHRCSKVSR 112 R S +L++ + G E+N S T +++ SLQA GLQ +G + + R Sbjct 294 RMFHSAYLASQKYFRHGPWYHEANMWSGKPTYWQLTSLQAFWPGLQVLVGDIAAANSSHR 353 Query 111 E 109 E Sbjct 354 E 354
  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 16, 2007  5:53 PM
  Number of letters in database: 101,065,385
  Number of sequences in database:  283,397
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283397
Number of Hits to DB: 339
Number of extensions: 8
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 572
Length of database: 101065385
Length adjustment: 107
Effective length of query: 465
Effective length of database: 70741906
Effective search space: 5871578198
Effective search space used: 5871578198
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 64 (29.3 bits)