RID=1169014499-7039-129728252589.BLASTQ4, Contig369

BLASTX 2.2.15 [Oct-15-2006]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1169014499-7039-129728252589.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,460,989 sequences; 1,533,424,333 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Query=  Contig369
Length=457

Distribution of 18 Blast Hits on the Query Sequence

                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|108706108|gb|ABF93903.1|  60S ribosomal protein L21, putati...   276    3e-74
gi|115482412|ref|NP_001064799.1|  Os10g0465800 [Oryza sativa (...   273    1e-73 
gi|3885884|gb|AAC78102.1|  60S ribosomal protein L21 [Oryza sativ   271    9e-73 
gi|18391042|ref|NP_563847.1|  structural constituent of riboso...   263    2e-70 
gi|18406015|ref|NP_564724.1|  structural constituent of riboso...   262    4e-70 
gi|32400808|gb|AAP80636.1|AF475114_1  60s ribosomal protein L21 [   260    1e-69 
gi|76161012|gb|ABA40469.1|  60S ribosomal protein L21-like protei   239    3e-63
gi|77416933|gb|ABA81862.1|  unknown [Solanum tuberosum]             239    4e-63
gi|115450647|ref|NP_001048924.1|  Os03g0141000 [Oryza sativa (...   169    5e-42 
gi|116055506|emb|CAL58174.1|  60S ribosomal protein L21 (ISS) [Os   160    2e-39
gi|6692124|gb|AAF24589.1|AC007654_5  T19E23.15 [Arabidopsis thali   123    3e-28
gi|6729525|emb|CAB67610.1|  putative protein [Arabidopsis thalian  81.6    1e-15
gi|115463521|ref|NP_001055360.1|  Os05g0372200 [Oryza sativa (...  31.6    1.2   
gi|116000555|emb|CAL50235.1|  Multifunctional pyrimidine synth...  30.4    2.7  
gi|115468632|ref|NP_001057915.1|  Os06g0571300 [Oryza sativa (...  30.4    2.7   
gi|10176814|dbj|BAB10022.1|  endosomal protein-like [Arabidopsis   30.4    2.7  
gi|92874511|gb|ABE82766.1|  unnamed protein product; gene_id:M...  30.0    3.6  
gi|26190149|emb|CAD21954.1|  putative retinoblastoma protein [Phy  28.9    7.9

Alignments

 

>gi|108706108|gb|ABF93903.1|  60S ribosomal protein L21, putative, expressed [Oryza sativa 
(japonica cultivar-group)]
Length=164

 Score =  276 bits (705),  Expect = 3e-74
 Identities = 129/137 (94%), Positives = 136/137 (99%), Gaps = 0/137 (0%)
 Frame = +3

Query  45   MPAGHGLRARTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR  224
            MPAGHGLRARTRDLFARPFRKKGYIPL+TYLRTYKIGDYVD+KVNGAVHKGMPHKFYHGR
Sbjct  1    MPAGHGLRARTRDLFARPFRKKGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR  60

Query  225  TGRVWNVTKRAIGVEVNKQVGNRIIRKRIHVRVEHVQPSRCTEEFKLRKVKNDQLKAEAK  404
            TGRVWNVTKRAIGVE+NKQVGNRIIRKRIHVRVEHVQPSRCTEE +LRK+KNDQLKA+AK
Sbjct  61   TGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCTEELRLRKIKNDQLKADAK  120

Query  405  AKGEVISTKRQPEGPKP  455
            A+GEVISTKRQPEGPKP
Sbjct  121  ARGEVISTKRQPEGPKP  137


>gi|115482412|ref|NP_001064799.1|  Os10g0465800 [Oryza sativa (japonica cultivar-group)]
 gi|13489167|gb|AAK27801.1|AC022457_4  60S ribosomal protein L21 [Oryza sativa (japonica cultivar-group)]
 gi|31432571|gb|AAP54186.1|  60S ribosomal protein L21, putative, expressed [Oryza sativa 
(japonica cultivar-group)]
 gi|113639408|dbj|BAF26713.1|  Os10g0465800 [Oryza sativa (japonica cultivar-group)]
Length=164

 Score =  273 bits (699),  Expect = 1e-73
 Identities = 127/137 (92%), Positives = 137/137 (100%), Gaps = 0/137 (0%)
 Frame = +3

Query  45   MPAGHGLRARTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR  224
            MPAGHGLRARTRDLFARPFRKKGYIPL+TYLRTYKIG++VD+KVNGAVHKGMPHKFYHGR
Sbjct  1    MPAGHGLRARTRDLFARPFRKKGYIPLTTYLRTYKIGEHVDVKVNGAVHKGMPHKFYHGR  60

Query  225  TGRVWNVTKRAIGVEVNKQVGNRIIRKRIHVRVEHVQPSRCTEEFKLRKVKNDQLKAEAK  404
            TGRVWNVTKRAIGVE+NKQVGNRIIRKRIHVRVEHVQPSRCTEEF+LRK+KNDQLKA+AK
Sbjct  61   TGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCTEEFRLRKIKNDQLKADAK  120

Query  405  AKGEVISTKRQPEGPKP  455
            A+GEVISTKRQP+GPKP
Sbjct  121  ARGEVISTKRQPQGPKP  137


>gi|3885884|gb|AAC78102.1|  60S ribosomal protein L21 [Oryza sativa]
Length=164

 Score =  271 bits (692),  Expect = 9e-73
 Identities = 126/137 (91%), Positives = 136/137 (99%), Gaps = 0/137 (0%)
 Frame = +3

Query  45   MPAGHGLRARTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR  224
            MPA HGLRARTRDLFARPFRKKGYIPL+TYLRTYKIG++VD+KVNGAVHKGMPHKFYHGR
Sbjct  1    MPADHGLRARTRDLFARPFRKKGYIPLTTYLRTYKIGEHVDVKVNGAVHKGMPHKFYHGR  60

Query  225  TGRVWNVTKRAIGVEVNKQVGNRIIRKRIHVRVEHVQPSRCTEEFKLRKVKNDQLKAEAK  404
            TGRVWNVTKRAIGVE+NKQVGNRIIRKRIHVRVEHVQPSRCTEEF+LRK+KNDQLKA+AK
Sbjct  61   TGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCTEEFRLRKIKNDQLKADAK  120

Query  405  AKGEVISTKRQPEGPKP  455
            A+GEVISTKRQP+GPKP
Sbjct  121  ARGEVISTKRQPQGPKP  137


>gi|18391042|ref|NP_563847.1|  structural constituent of ribosome [Arabidopsis thaliana]
 gi|18391054|ref|NP_563849.1|  structural constituent of ribosome [Arabidopsis thaliana]
 gi|2851508|sp|Q43291|RL211_ARATH  60S ribosomal protein L21-1
 gi|13877929|gb|AAK44042.1|AF370227_1  putative 60S ribosomal protein L21 [Arabidopsis thaliana]
 gi|2160162|gb|AAB60725.1|  Similar to ribosomal protein L21 (gb|L38826). ESTs gb|AA395597,gb|ATTS5197 
come from this gene. [Arabidopsis thaliana]
 gi|3482935|gb|AAC33220.1|  Putative ribosomal protein L21 [Arabidopsis thaliana]
 gi|16323462|gb|AAL15225.1|  putative 60S ribosomal protein L21 [Arabidopsis thaliana]
 gi|16649107|gb|AAL24405.1|  Similar to ribosomal protein L21 [Arabidopsis thaliana]
 gi|20148655|gb|AAM10218.1|  similar to ribosomal protein L21 [Arabidopsis thaliana]
 gi|23397265|gb|AAN31914.1|  putative 60S ribosomal protein L21 [Arabidopsis thaliana]
Length=164

 Score =  263 bits (672),  Expect = 2e-70
 Identities = 121/137 (88%), Positives = 131/137 (95%), Gaps = 0/137 (0%)
 Frame = +3

Query  45   MPAGHGLRARTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR  224
            MPAGHG+RARTRDLFARPFRKKGYIPLSTYLRT+K+GDYVD+KVNGA+HKGMPHKFYHGR
Sbjct  1    MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR  60

Query  225  TGRVWNVTKRAIGVEVNKQVGNRIIRKRIHVRVEHVQPSRCTEEFKLRKVKNDQLKAEAK  404
            TGR+WNVTKRA+GVEVNKQ+GNRIIRKRIHVRVEHVQ SRC EEFKLRK KND+LKA AK
Sbjct  61   TGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKKNDELKAAAK  120

Query  405  AKGEVISTKRQPEGPKP  455
            A GE ISTKRQP+GPKP
Sbjct  121  ANGETISTKRQPKGPKP  137


>gi|18406015|ref|NP_564724.1|  structural constituent of ribosome [Arabidopsis thaliana]
 gi|18406104|ref|NP_564726.1|  structural constituent of ribosome [Arabidopsis thaliana]
 gi|75170010|sp|Q9FDZ9|RL212_ARATH  60S ribosomal protein L21-2
 gi|11079525|gb|AAG29235.1|AC079732_6  60S ribosomal protein L21, putative [Arabidopsis thaliana]
 gi|12321346|gb|AAG50742.1|AC079733_10  60S ribosomal protein L21, putative [Arabidopsis thaliana]
 gi|15292813|gb|AAK92775.1|  putative 60S ribosomal protein L21 [Arabidopsis thaliana]
 gi|20258869|gb|AAM14106.1|  putative 60S ribosomal protein L21 [Arabidopsis thaliana]
 gi|21555617|gb|AAM63899.1|  60S ribosomal protein L21, putative [Arabidopsis thaliana]
 gi|28466903|gb|AAO44060.1|  At1g57860 [Arabidopsis thaliana]
 gi|110735696|dbj|BAE99828.1|  hypothetical protein [Arabidopsis thaliana]
Length=164

 Score =  262 bits (669),  Expect = 4e-70
 Identities = 120/137 (87%), Positives = 132/137 (96%), Gaps = 0/137 (0%)
 Frame = +3

Query  45   MPAGHGLRARTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR  224
            MPAGHG+RARTRDLFARPFRKKGYIPLSTYLRT+K+GDYVD+KVNGA+HKGMPHKFYHGR
Sbjct  1    MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR  60

Query  225  TGRVWNVTKRAIGVEVNKQVGNRIIRKRIHVRVEHVQPSRCTEEFKLRKVKNDQLKAEAK  404
            TGR+WNVTKRA+GVEVNKQ+GNRIIRKRIHVRVEHVQ SRC EEFKLRK +ND LKA+AK
Sbjct  61   TGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKQNDVLKADAK  120

Query  405  AKGEVISTKRQPEGPKP  455
            A+GE ISTKRQP+GPKP
Sbjct  121  ARGETISTKRQPKGPKP  137


>gi|32400808|gb|AAP80636.1|AF475114_1  60s ribosomal protein L21 [Triticum aestivum]
Length=172

 Score =  260 bits (665),  Expect = 1e-69
 Identities = 121/138 (87%), Positives = 132/138 (95%), Gaps = 0/138 (0%)
 Frame = +3

Query  42   KMPAGHGLRARTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHG  221
            KMPAGHGLR+RTRDLFARPFRKKGYIPL+TYLRTYK+G++VD+KVNGAVHKGMPHKFYHG
Sbjct  8    KMPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHG  67

Query  222  RTGRVWNVTKRAIGVEVNKQVGNRIIRKRIHVRVEHVQPSRCTEEFKLRKVKNDQLKAEA  401
            RTGRVWNVTKRAIGVE+NKQVGNRII+KRIHVRVEHVQPSRC EEF  RK+ ND+L AEA
Sbjct  68   RTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLXAEA  127

Query  402  KAKGEVISTKRQPEGPKP  455
            KA+GEVISTKRQP GPKP
Sbjct  128  KARGEVISTKRQPAGPKP  145


>gi|76161012|gb|ABA40469.1|  60S ribosomal protein L21-like protein [Solanum tuberosum]
Length=164

 Score =  239 bits (610),  Expect = 3e-63
 Identities = 114/137 (83%), Positives = 125/137 (91%), Gaps = 0/137 (0%)
 Frame = +3

Query  45   MPAGHGLRARTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR  224
            MPAGHGLR+RTRD F+R FRKKG I LSTYLR +KIGDYVDIKVNGA+HKGMPHKFYHGR
Sbjct  1    MPAGHGLRSRTRDSFSRAFRKKGTIALSTYLRIFKIGDYVDIKVNGAIHKGMPHKFYHGR  60

Query  225  TGRVWNVTKRAIGVEVNKQVGNRIIRKRIHVRVEHVQPSRCTEEFKLRKVKNDQLKAEAK  404
            TGRVWNVTKRA+GVEVNKQV N+I+RKRIHVR+EHVQ SRCTEE + R  KNDQLKA+AK
Sbjct  61   TGRVWNVTKRAVGVEVNKQVRNKILRKRIHVRIEHVQQSRCTEEVRERIKKNDQLKADAK  120

Query  405  AKGEVISTKRQPEGPKP  455
            A+GEVISTKRQP GPKP
Sbjct  121  ARGEVISTKRQPLGPKP  137


>gi|77416933|gb|ABA81862.1|  unknown [Solanum tuberosum]
Length=159

 Score =  239 bits (609),  Expect = 4e-63
 Identities = 113/137 (82%), Positives = 125/137 (91%), Gaps = 0/137 (0%)
 Frame = +3

Query  45   MPAGHGLRARTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR  224
            MPAGHGLR+RTRD F+R FRKKG I LSTYLR +KIGDYVDIKVNGA+HKGMPHKFYHGR
Sbjct  1    MPAGHGLRSRTRDSFSRAFRKKGTIALSTYLRIFKIGDYVDIKVNGAIHKGMPHKFYHGR  60

Query  225  TGRVWNVTKRAIGVEVNKQVGNRIIRKRIHVRVEHVQPSRCTEEFKLRKVKNDQLKAEAK  404
            TGRVWNVTKRA+GVEVNKQV N+I+RKRIHVR+EHVQ SRCTEE + R  KNDQLKA+AK
Sbjct  61   TGRVWNVTKRAVGVEVNKQVRNKILRKRIHVRIEHVQQSRCTEEVRERIKKNDQLKADAK  120

Query  405  AKGEVISTKRQPEGPKP  455
            A+GE+ISTKRQP GPKP
Sbjct  121  ARGEIISTKRQPLGPKP  137


>gi|115450647|ref|NP_001048924.1|  Os03g0141000 [Oryza sativa (japonica cultivar-group)]
 gi|113547395|dbj|BAF10838.1|  Os03g0141000 [Oryza sativa (japonica cultivar-group)]
Length=80

 Score =  169 bits (427),  Expect = 5e-42
 Identities = 77/80 (96%), Positives = 80/80 (100%), Gaps = 0/80 (0%)
 Frame = +3

Query  45   MPAGHGLRARTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR  224
            MPAGHGLRARTRDLFARPFRKKGYIPL+TYLRTYKIGDYVD+KVNGAVHKGMPHKFYHGR
Sbjct  1    MPAGHGLRARTRDLFARPFRKKGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR  60

Query  225  TGRVWNVTKRAIGVEVNKQV  284
            TGRVWNVTKRAIGVE+NKQV
Sbjct  61   TGRVWNVTKRAIGVEINKQV  80


>gi|116055506|emb|CAL58174.1|  60S ribosomal protein L21 (ISS) [Ostreococcus tauri]
Length=168

 Score =  160 bits (404),  Expect = 2e-39
 Identities = 77/129 (59%), Positives = 97/129 (75%), Gaps = 0/129 (0%)
 Frame = +3

Query  60   GLRARTRDLFARPFRKKGYIPLSTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTGRVW  239
            GLR  TR+LF+R  R+ G +  +TYLRT+++GDYVDIKVN A  KGMP+  Y GRTG+VW
Sbjct  10   GLRHGTRNLFSRGHREHGTLNTTTYLRTFRVGDYVDIKVNSAQQKGMPYLQYQGRTGQVW  69

Query  240  NVTKRAIGVEVNKQVGNRIIRKRIHVRVEHVQPSRCTEEFKLRKVKNDQLKAEAKAKGEV  419
            NVT RA+GVE+NKQ+G RI RKRIHVR+EHVQ SRC E+F  R+  ND+   EA   G+ 
Sbjct  70   NVTPRAVGVEINKQIGGRIARKRIHVRIEHVQHSRCREDFIARREANDKAHHEAHLAGKK  129

Query  420  ISTKRQPEG  446
            I+TKR+  G
Sbjct  130  ITTKREVTG  138


>gi|6692124|gb|AAF24589.1|AC007654_5  T19E23.15 [Arabidopsis thaliana]
Length=137

 Score =  123 bits (308),  Expect = 3e-28
 Identities = 70/127 (55%), Positives = 79/127 (62%), Gaps = 35/127 (27%)
 Frame = +3

Query  105  KKGYIPLSTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQV  284
            KKGYI LSTYL T+K+GDYV++KVNGA+HK                         VNKQ+
Sbjct  10   KKGYILLSTYLITFKVGDYVNVKVNGAIHK-------------------------VNKQI  44

Query  285  GNRIIRKRIHVRVEHVQPSR----------CTEEFKLRKVKNDQLKAEAKAKGEVISTKR  434
             NR IRKRIHVRVEHVQ SR          C +EF LRK +ND  KA AKAK E ISTKR
Sbjct  45   KNRNIRKRIHVRVEHVQQSRTMCLRLQQSRCDDEFSLRKKQNDVFKAAAKAKCETISTKR  104

Query  435  QPEGPKP  455
            QP+GPKP
Sbjct  105  QPKGPKP  111


>gi|6729525|emb|CAB67610.1|  putative protein [Arabidopsis thaliana]
Length=89

 Score = 81.6 bits (200),  Expect = 1e-15
 Identities = 39/52 (75%), Positives = 45/52 (86%), Gaps = 0/52 (0%)
 Frame = +3

Query  279  QVGNRIIRKRIHVRVEHVQPSRCTEEFKLRKVKNDQLKAEAKAKGEVISTKR  434
            Q+G++IIRKRIHV VEHVQ SRC  EFKLRK KND+LKA +KA+GE ISTKR
Sbjct  38   QIGDKIIRKRIHVLVEHVQQSRCAVEFKLRKKKNDELKAASKARGETISTKR  89


>gi|115463521|ref|NP_001055360.1|  Os05g0372200 [Oryza sativa (japonica cultivar-group)]
 gi|49328132|gb|AAT58830.1|  unknown protein [Oryza sativa (japonica cultivar-group)]
 gi|113578911|dbj|BAF17274.1|  Os05g0372200 [Oryza sativa (japonica cultivar-group)]
Length=387

 Score = 31.6 bits (70),  Expect = 1.2
 Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
 Frame = +3

Query  264  VEVNKQVGNRIIRKRIHVRVEHVQPSRCTEEFKLRKVKNDQLKAEAKAKGEVISTKRQPE  443
            V  ++ V    +R+R+H R+  ++ +RCT    L K K +  K +   KG+ +  KR+ E
Sbjct  159  VSEDRSVTYEELRERLHRRIAELRGNRCTRPEFLNKPKRE--KGKKGKKGKDVGKKRKRE  216


>gi|116000555|emb|CAL50235.1|  Multifunctional pyrimidine synthesis protein CAD (includes carbamoyl-phophate 
synthetase, aspartate transcarbamylase, and 
glutamine amidotransferase) (ISS) [Ostreococcus tauri]
Length=2123

 Score = 30.4 bits (67),  Expect = 2.7
 Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 7/119 (5%)
 Frame = +3

Query  42   KMPAGHGLRAR-TRDLFARPFRK-KGYIPLSTYLRTYKIGDYVDIKVNGAVHKGMPHKFY  215
            K P  H + AR T +     F+   G I   ++  T  +  Y  +  NG VH+    +F 
Sbjct  469  KYPETHVIAARITAENPDEGFKPTSGGIERISFQSTPNVWGYFSVGANGGVHEFADSQFG  528

Query  216  H-GRTGRVWNVTKRAIGVEVNKQVGNRIIRKRIHVRVEHVQPSRCTEEFKLRKVKNDQL  389
            H   +GR  N  ++A+ + +       ++R  I   VE++     T+EFK   +    L
Sbjct  529  HIFASGRNRNEARKALILALK----GMVVRGEIRTAVEYLVQLLETDEFKANTIDTSWL  583


>gi|115468632|ref|NP_001057915.1|  Os06g0571300 [Oryza sativa (japonica cultivar-group)]
 gi|113595955|dbj|BAF19829.1|  Os06g0571300 [Oryza sativa (japonica cultivar-group)]
Length=436

 Score = 30.4 bits (67),  Expect = 2.7
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 0/37 (0%)
 Frame = +1

Query  31   PESEKCLPVTVSALGQGICSPDPSERRVTFPCRLTLG  141
            PE   CLP   +  G+  C P P+  R+  P RL LG
Sbjct  70   PEKGLCLPPPAAPEGRRQCLPPPTAPRLPRPDRLVLG  106


>gi|10176814|dbj|BAB10022.1|  endosomal protein-like [Arabidopsis thaliana]
Length=658

 Score = 30.4 bits (67),  Expect = 2.7
 Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
 Frame = +3

Query  114  YIPLSTYLRTYKIGDYVDIKVNG--AVHKGMPHKFY  215
            Y+P  +Y   Y++GDY+++KVN   ++   MP  +Y
Sbjct  25   YLP-GSYPHKYEVGDYLNVKVNSLTSIETEMPFSYY  59


>gi|92874511|gb|ABE82766.1|  unnamed protein product; gene_id:MSD24.1 unknown protein, putative 
[Medicago truncatula]
Length=831

 Score = 30.0 bits (66),  Expect = 3.6
 Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 4/107 (3%)
 Frame = +3

Query  132  YLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVGNRIIRKRI  311
            ++ TY+     +        KG P K +  R G   N+ K  +   ++K+       KR+
Sbjct  357  FVETYEPVPREEFSFRNPKAKGAPSKTFKPREGSTTNMRKETMEESLSKRFIKEERSKRV  416

Query  312  HVRVEH-VQPSRCTEEFKLRKVKNDQLKAEA---KAKGEVISTKRQP  440
            +  +E+ V+  +  E  K++K       +E    KAK + I+  R+P
Sbjct  417  NEFLEYDVKEIKAVENKKVQKASQRSQASETVDEKAKVKNITILRKP  463


>gi|26190149|emb|CAD21954.1|  putative retinoblastoma protein [Physcomitrella patens]
Length=597

 Score = 28.9 bits (63),  Expect = 7.9
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 0/39 (0%)
 Frame = +1

Query  205  TSSTMAAPVVSGTSPSAPSALKSTSRWVTGLSGRGSTCE  321
            TS+     V SG SPS+P     +S  V G    GSTC+
Sbjct  74   TSAGQGRAVSSGASPSSPCGSPESSPAVMGGVAGGSTCK  112

  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 16, 2007  5:53 PM
  Number of letters in database: 101,065,385
  Number of sequences in database:  283,397
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283397
Number of Hits to DB: 352
Number of extensions: 1
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 457
Length of database: 101065385
Length adjustment: 103
Effective length of query: 354
Effective length of database: 71875494
Effective search space: 3521899206
Effective search space used: 3521899206
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 62 (28.5 bits)