RID=1169015155-4332-214529191923.BLASTQ4, Contig381

BLASTX 2.2.15 [Oct-15-2006]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1169015155-4332-214529191923.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,460,989 sequences; 1,533,424,333 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Query=  Contig381
Length=311

Distribution of 12 Blast Hits on the Query Sequence

                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|28973727|gb|AAO64180.1|  unknown protein [Arabidopsis thali...  30.8    1.5   
gi|15233656|ref|NP_194133.1|  transcription factor [Arabidopsi...  30.8    1.5   
gi|4406801|gb|AAD20110.1|  unknown protein [Arabidopsis thaliana]  29.6    3.3  
gi|115458884|ref|NP_001053042.1|  Os04g0469100 [Oryza sativa (...  29.3    4.3   
gi|10177905|dbj|BAB11316.1|  unnamed protein product [Arabidopsis  28.9    5.6  
gi|110738715|dbj|BAF01282.1|  hypothetical protein [Arabidopsis t  28.9    5.6  
gi|15231642|ref|NP_191475.1|  unknown protein [Arabidopsis tha...  28.5    7.4   
gi|7529758|emb|CAB86943.1|  putative protein [Arabidopsis thalian  28.5    7.4  
gi|79531455|ref|NP_199580.2|  unknown protein [Arabidopsis thalia  28.5    7.4   
gi|15224132|ref|NP_179414.1|  unknown protein [Arabidopsis tha...  24.6    9.3   
gi|18652511|gb|AAL77145.1|AC097447_11  Putative TNP-like trans...  28.1    9.6

Alignments

 

>gi|28973727|gb|AAO64180.1|  unknown protein [Arabidopsis thaliana]
 gi|110736843|dbj|BAF00379.1|  hypothetical protein [Arabidopsis thaliana]
Length=959

 Score = 30.8 bits (68),  Expect = 1.5
 Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
 Frame = -3

Query  183  TPSAPEAPKL*IRTQRKCRVWGAKQGPSAHHGKGSLSRLSQHQKGQRSRENXGKVMSHGS  4
            +P+  + P+L   T      W +   P+  +G   L   + H++ +   E+ G   SHGS
Sbjct  684  SPNGSKPPEL-PNTNNSPNHWSSDHSPNEPNGSPELPPSNGHKRSRTVDESAGTPTSHGS  742

Query  3    C  1
            C
Sbjct  743  C  743


>gi|15233656|ref|NP_194133.1|  transcription factor [Arabidopsis thaliana]
 gi|2262113|gb|AAB63621.1|  unknown protein [Arabidopsis thaliana]
 gi|5668630|emb|CAB51645.1|  putative protein [Arabidopsis thaliana]
 gi|7269251|emb|CAB81320.1|  putative protein [Arabidopsis thaliana]
Length=959

 Score = 30.8 bits (68),  Expect = 1.5
 Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
 Frame = -3

Query  183  TPSAPEAPKL*IRTQRKCRVWGAKQGPSAHHGKGSLSRLSQHQKGQRSRENXGKVMSHGS  4
            +P+  + P+L   T      W +   P+  +G   L   + H++ +   E+ G   SHGS
Sbjct  684  SPNGSKPPEL-PNTNNSPNHWSSDHSPNEPNGSPELPPSNGHKRSRTVDESAGTPTSHGS  742

Query  3    C  1
            C
Sbjct  743  C  743


>gi|4406801|gb|AAD20110.1|  unknown protein [Arabidopsis thaliana]
Length=192

 Score = 29.6 bits (65),  Expect = 3.3
 Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 0/25 (0%)
 Frame = +2

Query  59   CCDRRLKLPLPWCAEGPCFAPQTLH  133
            CCD RL++ + +C    CF  Q +H
Sbjct  130  CCDHRLQILVRFCRSTTCFVVQAVH  154


>gi|115458884|ref|NP_001053042.1|  Os04g0469100 [Oryza sativa (japonica cultivar-group)]
 gi|38606530|emb|CAE06008.3|  OSJNBa0016O02.18 [Oryza sativa (japonica cultivar-group)]
 gi|113564613|dbj|BAF14956.1|  Os04g0469100 [Oryza sativa (japonica cultivar-group)]
 gi|116310363|emb|CAH67376.1|  OSIGBa0128P10.10 [Oryza sativa (indica cultivar-group)]
 gi|116310417|emb|CAH67425.1|  OSIGBa0150F01.5 [Oryza sativa (indica cultivar-group)]
Length=131

 Score = 29.3 bits (64),  Expect = 4.3
 Identities = 10/27 (37%), Positives = 13/27 (48%), Gaps = 0/27 (0%)
 Frame = +2

Query  62   CDRRLKLPLPWCAEGPCFAPQTLHFLC  142
            C  +  LP+PWC   PC+ P      C
Sbjct  95   CPCQATLPVPWCPPPPCYYPPPSMVYC  121


>gi|10177905|dbj|BAB11316.1|  unnamed protein product [Arabidopsis thaliana]
Length=1638

 Score = 28.9 bits (63),  Expect = 5.6
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 8/46 (17%)
 Frame = -1

Query  194   PKSTHLQHQKLQSCKSERRGSA--------EFGEQSRDLQHTTAKE  81
             PKS  L+H+K++S   +RR SA        E GE+  + +  + KE
Sbjct  1528  PKSLSLEHEKVESRNKKRRSSALPKTEYSGEAGEEKSESEGKSLKE  1573


>gi|110738715|dbj|BAF01282.1|  hypothetical protein [Arabidopsis thaliana]
Length=1605

 Score = 28.9 bits (63),  Expect = 5.6
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 8/46 (17%)
 Frame = -1

Query  194   PKSTHLQHQKLQSCKSERRGSA--------EFGEQSRDLQHTTAKE  81
             PKS  L+H+K++S   +RR SA        E GE+  + +  + KE
Sbjct  1482  PKSLSLEHEKVESRNKKRRSSALPKTEYSGEAGEEKSESEGKSLKE  1527


>gi|15231642|ref|NP_191475.1|  unknown protein [Arabidopsis thaliana]
 gi|7801666|emb|CAB91586.1|  putative protein [Arabidopsis thaliana]
Length=464

 Score = 28.5 bits (62),  Expect = 7.4
 Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
 Frame = -2

Query  265  PKLGQLLLHSIWSW*FVNC-LNLKTQRVHTFSTRSSKAVNQNAEEVQSLGSKAGTFSTPR  89
            P+L +L+LH IWS  + +C +++ T +  TF   + K    + E   ++     +F TP 
Sbjct  216  PELEELVLHHIWSCVWTSCSVSVATLKRLTFCCNNMKFCGMHEENPNNV-----SFDTPN  270

Query  88   QRKLE  74
               LE
Sbjct  271  LVYLE  275


>gi|7529758|emb|CAB86943.1|  putative protein [Arabidopsis thaliana]
Length=827

 Score = 28.5 bits (62),  Expect = 7.4
 Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
 Frame = -2

Query  265  PKLGQLLLHSIWSW*FVNC-LNLKTQRVHTFSTRSSKAVNQNAEEVQSLGSKAGTFSTPR  89
            P+L +L+LH IWS  + +C +++ T +  TF   + K    + E   ++     +F TP 
Sbjct  698  PELEELVLHHIWSCVWTSCSVSVATLKRLTFCCNNMKFCGMHEENPNNV-----SFDTPN  752

Query  88   QRKLE  74
               LE
Sbjct  753  LVYLE  757


>gi|79531455|ref|NP_199580.2|  unknown protein [Arabidopsis thaliana]
Length=1653

 Score = 28.5 bits (62),  Expect = 7.4
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 9/47 (19%)
 Frame = -1

Query  194   PKSTHLQHQKLQSCKSERRGSA---------EFGEQSRDLQHTTAKE  81
             PKS  L+H+K++S   +RR SA         E GE+  + +  + KE
Sbjct  1529  PKSLSLEHEKVESRNKKRRSSALPIETEYSGEAGEEKSESEGKSLKE  1575


>gi|15224132|ref|NP_179414.1|  unknown protein [Arabidopsis thaliana]
 gi|8480758|sp|Q9ZPV5|NOC2L_ARATH  Nucleolar complex protein 2 homolog (Protein NOC2 homolog)
 gi|4309744|gb|AAD15514.1|  unknown protein [Arabidopsis thaliana]
Length=779

 Score = 24.6 bits (52),  Expect(2) = 9.3
 Identities = 9/24 (37%), Positives = 16/24 (66%), Gaps = 0/24 (0%)
 Frame = -2

Query  235  IWSW*FVNCLNLKTQRVHTFSTRS  164
            ++ W F++CL L T  V  +S++S
Sbjct  400  VYQWKFIHCLELWTGAVCAYSSQS  423


 Score = 21.9 bits (45),  Expect(2) = 9.3
 Identities = 8/25 (32%), Positives = 13/25 (52%), Gaps = 0/25 (0%)
 Frame = -3

Query  303  NLKFYTTDRTQKSQNLGNCYFIVFG  229
            N +F   D+ +    LGNC+  + G
Sbjct  340  NCQFVNADKLKHISFLGNCFIELLG  364


>gi|18652511|gb|AAL77145.1|AC097447_11  Putative TNP-like transposable element [Oryza sativa (japonica 
cultivar-group)]
 gi|31430319|gb|AAP52250.1|  transposon protein, putative, CACTA, En/Spm sub-class [Oryza 
sativa (japonica cultivar-group)]
Length=844

 Score = 28.1 bits (61),  Expect = 9.6
 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
 Frame = +2

Query  2    HEPWLITLPXFSLLRCPFWCCDRRLKLPLPWCAEGP  109
            H  W IT+  ++L   P W C +R  + +P   +GP
Sbjct  275  HSTWPITMCIYNL---PLWLCMKRKYIMMPIIIQGP  307

  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 16, 2007  5:53 PM
  Number of letters in database: 101,065,385
  Number of sequences in database:  283,397
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283397
Number of Hits to DB: 199
Number of extensions: 0
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 311
Length of database: 101065385
Length adjustment: 72
Effective length of query: 239
Effective length of database: 80660801
Effective search space: 2500484831
Effective search space used: 2500484831
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 61 (28.1 bits)