Header of the page

BLASTX 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman 
(1997), "Gapped BLAST and PSI-BLAST: a new generation of 
protein database search programs", Nucleic Acids Res. 25:3389-3402.

RID: 1168930265-21058-177292522989.BLASTQ1


Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
           4,458,890 sequences; 1,532,996,420 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Query=  Contig39
Length=424


Distribution of 53 Blast Hits on the Query Sequence



Related Structures

                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|115482800|ref|NP_001064993.1|  Os10g0502600 [Oryza sativa (...   177    7e-53 Gene info
gi|4960154|gb|AAD34615.1|AF153283_1  putative progesterone-bin...   184    1e-52 UniGene info
gi|15229044|ref|NP_190458.1|  ATMP2 [Arabidopsis thaliana] >gi...   184    1e-52 UniGene infoGene info
gi|82780762|gb|ABB90550.1|  putative steroid membrane binding pro   174    4e-51
gi|4960156|gb|AAD34616.1|AF153284_1  putative progesterone-bin...   173    8e-49 UniGene info
gi|15242943|ref|NP_200037.1|  MSBP1 [Arabidopsis thaliana] >gi...   173    1e-48 UniGene infoGene info
gi|115447533|ref|NP_001047546.1|  Os02g0640300 [Oryza sativa (...   163    3e-47 Gene info
gi|115482798|ref|NP_001064992.1|  Os10g0502500 [Oryza sativa (...   151    1e-42 Gene info
gi|115452713|ref|NP_001049957.1|  Os03g0321000 [Oryza sativa (...   129    3e-30 Gene info
gi|53748439|emb|CAH59414.1|  hypothetical protein [Plantago major   100    2e-23
gi|115449183|ref|NP_001048371.1|  Os02g0793700 [Oryza sativa (...  97.8    5e-21 Gene info
gi|48425750|pdb|1T0G|A  Chain A, Hypothetical Protein At2g2494...  91.7    8e-19 Related structures
gi|40889041|pdb|1J03|A  Chain A, Solution Structure Of A Putat...  90.9    1e-18 Related structures
gi|15224648|ref|NP_180066.1|  unknown protein [Arabidopsis tha...  90.9    1e-18 UniGene infoGene info
gi|116057944|emb|CAL54147.1|  Putative steroid membrane recept...  88.2    9e-18
gi|18414350|ref|NP_567451.1|  unknown protein [Arabidopsis tha...  67.0    2e-11 UniGene infoGene info
gi|21536603|gb|AAM60935.1|  unknown [Arabidopsis thaliana]         66.6    3e-11 UniGene info
gi|24417258|gb|AAN60239.1|  unknown [Arabidopsis thaliana]         66.6    3e-11 UniGene info
gi|38016533|gb|AAR07602.1|  fiber protein Fb38 [Gossypium barbade  65.9    5e-11
gi|38637200|dbj|BAD03451.1|  steroid membrane binding protein-...  64.7    1e-10 Gene info
gi|115451427|ref|NP_001049314.1|  Os03g0205500 [Oryza sativa (...  58.2    1e-08 Gene info
gi|5302775|emb|CAB46053.1|  hypothetical protein [Arabidopsis ...  57.8    1e-08
gi|116060186|emb|CAL56245.1|  Putative steroid membrane recept...  43.5    2e-04
gi|75755967|gb|ABA27039.1|  TO82a-3 [Taraxacum officinale]         42.7    4e-04
gi|108706748|gb|ABF94543.1|  cytochrome b5 domain-containing p...  35.4    0.068
gi|71068109|gb|AAZ23034.1|  delta-6 desaturase-related protein...  34.7    0.12 
gi|30350277|gb|AAP23034.1|  fatty acid delta-6 desaturase [Primul  33.9    0.20 
gi|30350275|gb|AAP23033.1|  sphingolipid delta-8 desaturase [Prim  33.5    0.26 
gi|30350281|gb|AAP23036.1|  fatty acid delta-6 desaturase [Primul  32.3    0.57 
gi|71068111|gb|AAZ23035.1|  delta-6 desaturase [Echium sabulicola  31.2    1.3  
gi|92868038|gb|ABE78138.1|  RNA-directed DNA polymerase (Rever...  30.8    1.7  
gi|22652111|gb|AAN03619.1|AF406816_1  sphingolipid long chain ...  30.8    1.7  
gi|18403775|ref|NP_565801.1|  ATP binding / DNA binding [Arabi...  30.8    1.7   UniGene infoGene info
gi|70795233|gb|AAZ08559.1|  delta-6 desaturase [Echium plantagine  30.8    1.7  
gi|92876082|gb|ABE83827.1|  RNA-directed DNA polymerase (Rever...  30.0    2.8  
gi|93280154|gb|ABF06705.1|  Joka8 [Nicotiana plumbaginifolia]      29.6    3.7  
gi|15235978|ref|NP_193447.1|  unknown protein [Arabidopsis tha...  29.6    3.7   UniGene infoGene info
gi|115467948|ref|NP_001057573.1|  Os06g0342600 [Oryza sativa (...  29.3    4.9   Gene info
gi|57900267|dbj|BAD87085.1|  putative serine/threonine Kinase ...  28.9    6.3  
gi|115440771|ref|NP_001044665.1|  Os01g0824600 [Oryza sativa (...  28.9    6.3   Gene info
gi|116058719|emb|CAL54426.1|  1,3-beta-glucan synthase/callose...  28.5    8.3  
gi|92879639|gb|ABE85658.1|  Cyclin-like F-box [Medicago truncatul  28.5    8.3  
gi|6692693|gb|AAF24827.1|AC007592_20  F12K11.6 [Arabidopsis thali  28.5    8.3  
Alignments
>gi|115482800|ref|NP_001064993.1| Gene info Os10g0502600 [Oryza sativa (japonica cultivar-group)] gi|10140799|gb|AAG13629.1|AC078840_20 Gene info putative steroid membrane binding protein [Oryza sativa (japonica cultivar-group)] gi|110289351|gb|ABB47845.2| Gene info Membrane steroid binding protein 1, putative, expressed [Oryza sativa (japonica cultivar-group)] gi|113639602|dbj|BAF26907.1| Gene info Os10g0502600 [Oryza sativa (japonica cultivar-group)] Length=232 Score = 177 bits (449), Expect(2) = 7e-53 Identities = 88/114 (77%), Positives = 97/114 (85%), Gaps = 0/114 (0%) Frame = +1 Query 1 VVTGLFGSSGDQHLRNRAFEEQMEPLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKGQI 180 VV+G+F E + EPLPPPVQLGE++EEEL+QYDGSD KKPLLMAIKGQI Sbjct 40 VVSGIFAGPPPPPPPRPRDEPEAEPLPPPVQLGEVSEEELRQYDGSDPKKPLLMAIKGQI 99 Query 181 YDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQ 342 YDV+QSRMFYGPGGPYALFAGKDASRALAKMSFE +DLTGDISGLGPFEL+ALQ Sbjct 100 YDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQDLTGDISGLGPFELDALQ 153 Score = 48.9 bits (115), Expect(2) = 7e-53 Identities = 19/25 (76%), Positives = 23/25 (92%), Gaps = 0/25 (0%) Frame = +2 Query 341 KDWEYKFMSKYVKVGTIKKTVPITE 415 +DWEYKFM KYVKVGT+KKTVP+ + Sbjct 153 QDWEYKFMGKYVKVGTVKKTVPVED 177 >gi|4960154|gb|AAD34615.1|AF153283_1 UniGene info putative progesterone-binding protein homolog [Arabidopsis thaliana] Length=253 Score = 184 bits (466), Expect(2) = 1e-52 Identities = 94/114 (82%), Positives = 99/114 (86%), Gaps = 0/114 (0%) Frame = +1 Query 1 VVTGLFGSSGDQHLRNRAFEEQMEPLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKGQI 180 VV+G F S R+ + Q EPLPPPVQLGEITEEELK YDGSDSKKPLLMAIKGQI Sbjct 37 VVSGFFVSPEVHRPRSLEVQPQSEPLPPPVQLGEITEEELKLYDGSDSKKPLLMAIKGQI 96 Query 181 YDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQ 342 YDVSQSRMFYGPGGPYALFAGKDASRALAKMSFE++DLTGDISGLG FELEALQ Sbjct 97 YDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEDQDLTGDISGLGAFELEALQ 150 Score = 41.6 bits (96), Expect(2) = 1e-52 Identities = 17/19 (89%), Positives = 19/19 (100%), Gaps = 0/19 (0%) Frame = +2 Query 341 KDWEYKFMSKYVKVGTIKK 397 +DWEYKFMSKYVKVGTI+K Sbjct 150 QDWEYKFMSKYVKVGTIQK 168 >gi|15229044|ref|NP_190458.1| UniGene infoGene info ATMP2 [Arabidopsis thaliana] gi|59800223|sp|Q9M2Z4|SBP2_ARATH Gene info Putative steroid-binding protein 2 (AtMP2) gi|16930427|gb|AAL31899.1|AF419567_1 UniGene infoGene info AT3g48890/T21J18_160 [Arabidopsis thaliana] gi|7576227|emb|CAB87917.1| Gene info putative progesterone-binding protein homolog Atmp2 [Arabidopsis thaliana] gi|19310509|gb|AAL84988.1| UniGene infoGene info AT3g48890/T21J18_160 [Arabidopsis thaliana] Length=233 Score = 184 bits (466), Expect(2) = 1e-52 Identities = 94/114 (82%), Positives = 99/114 (86%), Gaps = 0/114 (0%) Frame = +1 Query 1 VVTGLFGSSGDQHLRNRAFEEQMEPLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKGQI 180 VV+G F S R+ + Q EPLPPPVQLGEITEEELK YDGSDSKKPLLMAIKGQI Sbjct 37 VVSGFFVSPEVHRPRSLEVQPQSEPLPPPVQLGEITEEELKLYDGSDSKKPLLMAIKGQI 96 Query 181 YDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQ 342 YDVSQSRMFYGPGGPYALFAGKDASRALAKMSFE++DLTGDISGLG FELEALQ Sbjct 97 YDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEDQDLTGDISGLGAFELEALQ 150 Score = 41.6 bits (96), Expect(2) = 1e-52 Identities = 17/19 (89%), Positives = 19/19 (100%), Gaps = 0/19 (0%) Frame = +2 Query 341 KDWEYKFMSKYVKVGTIKK 397 +DWEYKFMSKYVKVGTI+K Sbjct 150 QDWEYKFMSKYVKVGTIQK 168 >gi|82780762|gb|ABB90550.1| putative steroid membrane binding protein [Triticum aestivum] Length=223 Score = 174 bits (442), Expect(2) = 4e-51 Identities = 88/114 (77%), Positives = 96/114 (84%), Gaps = 1/114 (0%) Frame = +1 Query 1 VVTGLFGSSGDQHLRNRAFEEQMEPLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKGQI 180 VV+G+F R R E + EPLPPPVQLGE+ EEEL+QYDGSD KKPLLMAIKGQI Sbjct 38 VVSGIFAPPPPPRQRPRE-EPEAEPLPPPVQLGEVDEEELRQYDGSDPKKPLLMAIKGQI 96 Query 181 YDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQ 342 YDV+QSRMFYGPGGPYALFAGKDASRALAKMSFE +DL GD SGLGPFEL+ALQ Sbjct 97 YDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEPQDLNGDTSGLGPFELDALQ 150 Score = 45.8 bits (107), Expect(2) = 4e-51 Identities = 19/22 (86%), Positives = 20/22 (90%), Gaps = 0/22 (0%) Frame = +2 Query 341 KDWEYKFMSKYVKVGTIKKTVP 406 +DWEYKFMSKYVKVGTIKK P Sbjct 150 QDWEYKFMSKYVKVGTIKKAAP 171 >gi|4960156|gb|AAD34616.1|AF153284_1 UniGene info putative progesterone-binding protein homolog [Arabidopsis thaliana] gi|21555444|gb|AAM63860.1| UniGene info progesterone-binding protein-like [Arabidopsis thaliana] Length=220 Score = 173 bits (439), Expect(2) = 8e-49 Identities = 90/118 (76%), Positives = 101/118 (85%), Gaps = 4/118 (3%) Frame = +1 Query 1 VVTGLFGSSGD---QHLRNRAFEEQMEP-LPPPVQLGEITEEELKQYDGSDSKKPLLMAI 168 V++G F S D +H R R+ ++ EP +P PVQ+GEITEEELKQYDGSD +KPLLMAI Sbjct 37 VISGWFASPFDDVNRHQRARSLAQEEEPPIPQPVQVGEITEEELKQYDGSDPQKPLLMAI 96 Query 169 KGQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQ 342 K QIYDV+QSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLT DISGLGPFEL+ALQ Sbjct 97 KHQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTWDISGLGPFELDALQ 154 Score = 39.3 bits (90), Expect(2) = 8e-49 Identities = 15/18 (83%), Positives = 17/18 (94%), Gaps = 0/18 (0%) Frame = +2 Query 341 KDWEYKFMSKYVKVGTIK 394 +DWEYKFMSKY KVGT+K Sbjct 154 QDWEYKFMSKYAKVGTVK 171 >gi|15242943|ref|NP_200037.1| UniGene infoGene info MSBP1 [Arabidopsis thaliana] gi|83288340|sp|Q9XFM6|MSBP1_ARATH Gene info Membrane steroid-binding protein 1 (AtMP1) gi|8885537|dbj|BAA97467.1| Gene info progesterone-binding protein-like [Arabidopsis thaliana] gi|24030304|gb|AAN41322.1| UniGene infoGene info putative progesterone-binding protein [Arabidopsis thaliana] Length=220 Score = 173 bits (438), Expect(2) = 1e-48 Identities = 89/118 (75%), Positives = 101/118 (85%), Gaps = 4/118 (3%) Frame = +1 Query 1 VVTGLFGSSGD---QHLRNRAFEEQMEP-LPPPVQLGEITEEELKQYDGSDSKKPLLMAI 168 V++G F S D +H R R+ ++ EP +P PVQ+GEITEEELKQYDGSD +KPLLMAI Sbjct 37 VISGWFASPFDDVNRHQRARSLAQEEEPPIPQPVQVGEITEEELKQYDGSDPQKPLLMAI 96 Query 169 KGQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQ 342 K QIYDV+QSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLT D+SGLGPFEL+ALQ Sbjct 97 KHQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTWDVSGLGPFELDALQ 154 Score = 39.3 bits (90), Expect(2) = 1e-48 Identities = 15/18 (83%), Positives = 17/18 (94%), Gaps = 0/18 (0%) Frame = +2 Query 341 KDWEYKFMSKYVKVGTIK 394 +DWEYKFMSKY KVGT+K Sbjct 154 QDWEYKFMSKYAKVGTVK 171 >gi|115447533|ref|NP_001047546.1| Gene info Os02g0640300 [Oryza sativa (japonica cultivar-group)] gi|49388239|dbj|BAD25359.1| Gene info steroid membrane binding protein-like [Oryza sativa (japonica cultivar-group)] gi|113537077|dbj|BAF09460.1| Gene info Os02g0640300 [Oryza sativa (japonica cultivar-group)] Length=333 Score = 163 bits (412), Expect(2) = 3e-47 Identities = 78/90 (86%), Positives = 84/90 (93%), Gaps = 0/90 (0%) Frame = +1 Query 70 EPLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKD 249 +PLPPPVQLGE+TEEEL+ YDGSD KPLLMAIKGQIYDV+QSRMFYGPGGPYALFAG+D Sbjct 59 QPLPPPVQLGEVTEEELRVYDGSDPNKPLLMAIKGQIYDVTQSRMFYGPGGPYALFAGRD 118 Query 250 ASRALAKMSFEEKDLTGDISGLGPFELEAL 339 ASRALAKMSFE DLTGD+SGLGP ELEAL Sbjct 119 ASRALAKMSFELDDLTGDVSGLGPIELEAL 148 Score = 44.3 bits (103), Expect(2) = 3e-47 Identities = 18/24 (75%), Positives = 22/24 (91%), Gaps = 0/24 (0%) Frame = +2 Query 344 DWEYKFMSKYVKVGTIKKTVPITE 415 +WE KFMSKYVKVGTIKK +P++E Sbjct 150 EWEGKFMSKYVKVGTIKKIIPVSE 173 >gi|115482798|ref|NP_001064992.1| Gene info Os10g0502500 [Oryza sativa (japonica cultivar-group)] gi|10140793|gb|AAG13623.1|AC078840_14 Gene info putative steroid membrane binding protein [Oryza sativa (japonica cultivar-group)] gi|31432910|gb|AAP54486.1| Gene info Cytochrome b5-like Heme/Steroid binding domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] gi|113639601|dbj|BAF26906.1| Gene info Os10g0502500 [Oryza sativa (japonica cultivar-group)] Length=265 Score = 151 bits (381), Expect(2) = 1e-42 Identities = 76/94 (80%), Positives = 81/94 (86%), Gaps = 0/94 (0%) Frame = +1 Query 61 EQMEPLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKGQIYDVSQSRMFYGPGGPYALFA 240 E+ P P PVQ+GEIT EEL QYDGSD +KPLLMAIKGQIYDVSQSR+FYGPGGPYALFA Sbjct 107 EEAPPPPEPVQVGEITAEELLQYDGSDPEKPLLMAIKGQIYDVSQSRLFYGPGGPYALFA 166 Query 241 GKDASRALAKMSFEEKDLTGDISGLGPFELEALQ 342 GKDASRALAKMSFE +DLT DISGL EL ALQ Sbjct 167 GKDASRALAKMSFEPQDLTDDISGLSLLELSALQ 200 Score = 41.2 bits (95), Expect(2) = 1e-42 Identities = 17/21 (80%), Positives = 19/21 (90%), Gaps = 0/21 (0%) Frame = +2 Query 341 KDWEYKFMSKYVKVGTIKKTV 403 +DWEYKF SKYVKVGTIKK + Sbjct 200 QDWEYKFSSKYVKVGTIKKVL 220 >gi|115452713|ref|NP_001049957.1| Gene info Os03g0321000 [Oryza sativa (japonica cultivar-group)] gi|108707869|gb|ABF95664.1| Gene info Membrane steroid binding protein 1, putative, expressed [Oryza sativa (japonica cultivar-group)] gi|113548428|dbj|BAF11871.1| Gene info Os03g0321000 [Oryza sativa (japonica cultivar-group)] Length=191 Score = 129 bits (325), Expect = 3e-30 Identities = 60/90 (66%), Positives = 74/90 (82%), Gaps = 0/90 (0%) Frame = +1 Query 73 PLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKDA 252 P P PVQ+GEIT E+L YDG D KP+L+AI+GQ+YDV++ R+FYGP GPY+LFAG+DA Sbjct 72 PYPDPVQVGEITLEQLAAYDGKDPAKPILIAIRGQVYDVTRGRLFYGPQGPYSLFAGRDA 131 Query 253 SRALAKMSFEEKDLTGDISGLGPFELEALQ 342 +RALA MSF+ DLTGD+ GLGP ELE LQ Sbjct 132 TRALALMSFDPIDLTGDLDGLGPDELEVLQ 161 >gi|53748439|emb|CAH59414.1| hypothetical protein [Plantago major] Length=101 Score = 100 bits (250), Expect(2) = 2e-23 Identities = 47/80 (58%), Positives = 60/80 (75%), Gaps = 0/80 (0%) Frame = +1 Query 100 EITEEELKQYDGSDSKKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSF 279 E+T E+LKQYDGSD KP+ +AI+G+IYDV+ + FYGPGG Y LF+GKDASRALAKMS Sbjct 2 ELTTEQLKQYDGSDPSKPIYVAIRGKIYDVTTGKSFYGPGGTYCLFSGKDASRALAKMSK 61 Query 280 EEKDLTGDISGLGPFELEAL 339 E+D+ + GL E+ L Sbjct 62 NEEDVVSSLHGLSDKEIGVL 81 Score = 26.9 bits (58), Expect(2) = 2e-23 Identities = 10/16 (62%), Positives = 12/16 (75%), Gaps = 0/16 (0%) Frame = +2 Query 344 DWEYKFMSKYVKVGTI 391 DWE KF +KY VGT+ Sbjct 83 DWEKKFQAKYPLVGTV 98 >gi|115449183|ref|NP_001048371.1| Gene info Os02g0793700 [Oryza sativa (japonica cultivar-group)] gi|47497145|dbj|BAD19194.1| Gene info cytochrome b5 domain-containing protein-like [Oryza sativa (japonica cultivar-group)] gi|47497592|dbj|BAD19662.1| Gene info cytochrome b5 domain-containing protein-like [Oryza sativa (japonica cultivar-group)] gi|113537902|dbj|BAF10285.1| Gene info Os02g0793700 [Oryza sativa (japonica cultivar-group)] Length=102 Score = 97.8 bits (242), Expect(2) = 5e-21 Identities = 43/80 (53%), Positives = 62/80 (77%), Gaps = 0/80 (0%) Frame = +1 Query 100 EITEEELKQYDGSDSKKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSF 279 E+T +L+ YDGSD KP+ ++++G++YDV+ R FYGPGG YA+FAG++ASRAL KMS Sbjct 4 ELTAAQLRAYDGSDPSKPIYVSVRGKVYDVTSGRGFYGPGGAYAVFAGREASRALGKMSK 63 Query 280 EEKDLTGDISGLGPFELEAL 339 ++ D++GD+SGL EL L Sbjct 64 DDADVSGDLSGLSDKELGVL 83 Score = 21.9 bits (45), Expect(2) = 5e-21 Identities = 8/16 (50%), Positives = 10/16 (62%), Gaps = 0/16 (0%) Frame = +2 Query 344 DWEYKFMSKYVKVGTI 391 DWE KF +KY V + Sbjct 85 DWETKFQAKYPVVARL 100 >gi|48425750|pdb|1T0G|A Related structures Chain A, Hypothetical Protein At2g24940.1 From Arabidopsis Thaliana Has A Cytochrome B5 Like Fold Length=109 Score = 91.7 bits (226), Expect = 8e-19 Identities = 42/82 (51%), Positives = 59/82 (71%), Gaps = 0/82 (0%) Frame = +1 Query 94 LGEITEEELKQYDGSDSKKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKDASRALAKM 273 L E T E+L QY+G+D KP+ +AIKG+++DV+ + FYG GG Y++FAGKDASRAL KM Sbjct 9 LEEFTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGKSFYGSGGDYSMFAGKDASRALGKM 68 Query 274 SFEEKDLTGDISGLGPFELEAL 339 S E+D++ + GL E+ L Sbjct 69 SKNEEDVSPSLEGLTEKEINTL 90 >gi|40889041|pdb|1J03|A Related structures Chain A, Solution Structure Of A Putative Steroid-Binding Protein From Arabidopsis Length=102 Score = 90.9 bits (224), Expect = 1e-18 Identities = 41/80 (51%), Positives = 58/80 (72%), Gaps = 0/80 (0%) Frame = +1 Query 100 EITEEELKQYDGSDSKKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSF 279 E T E+L QY+G+D KP+ +AIKG+++DV+ + FYG GG Y++FAGKDASRAL KMS Sbjct 4 EFTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGKSFYGSGGDYSMFAGKDASRALGKMSK 63 Query 280 EEKDLTGDISGLGPFELEAL 339 E+D++ + GL E+ L Sbjct 64 NEEDVSPSLEGLTEKEINTL 83 >gi|15224648|ref|NP_180066.1| UniGene infoGene info unknown protein [Arabidopsis thaliana] gi|62903498|sp|Q9SK39|SBP3_ARATH Gene info Putative steroid-binding protein 3 (AtMP3) gi|4559358|gb|AAD23019.1| Gene info putative steroid binding protein [Arabidopsis thaliana] gi|21536553|gb|AAM60885.1| UniGene infoGene info putative steroid binding protein [Arabidopsis thaliana] gi|27311681|gb|AAO00806.1| UniGene infoGene info putative steroid binding protein [Arabidopsis thaliana] gi|30725550|gb|AAP37797.1| UniGene infoGene info At2g24940 [Arabidopsis thaliana] Length=100 Score = 90.9 bits (224), Expect = 1e-18 Identities = 41/80 (51%), Positives = 58/80 (72%), Gaps = 0/80 (0%) Frame = +1 Query 100 EITEEELKQYDGSDSKKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSF 279 E T E+L QY+G+D KP+ +AIKG+++DV+ + FYG GG Y++FAGKDASRAL KMS Sbjct 2 EFTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGKSFYGSGGDYSMFAGKDASRALGKMSK 61 Query 280 EEKDLTGDISGLGPFELEAL 339 E+D++ + GL E+ L Sbjct 62 NEEDVSPSLEGLTEKEINTL 81 >gi|116057944|emb|CAL54147.1| Putative steroid membrane receptor Hpr6.6/25-Dx (ISS) [Ostreococcus tauri] Length=901 Score = 88.2 bits (217), Expect = 9e-18 Identities = 41/96 (42%), Positives = 59/96 (61%), Gaps = 0/96 (0%) Frame = +1 Query 58 EEQMEPLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKGQIYDVSQSRMFYGPGGPYALF 237 + + E P P G++T+ EL +DG D KP+L+A KG IYDV++ R FYG G Y F Sbjct 502 DSEEEDFPAPQPAGDLTKRELATFDGKDPTKPILLAAKGVIYDVTRGRDFYGAGASYNAF 561 Query 238 AGKDASRALAKMSFEEKDLTGDISGLGPFELEALQG 345 AGKD SRAL K+S + ++L+ ++ E + L G Sbjct 562 AGKDCSRALGKVSLDAENLSANVRDFAASERDTLNG 597 >gi|18414350|ref|NP_567451.1| UniGene infoGene info unknown protein [Arabidopsis thaliana] gi|87116572|gb|ABD19650.1| UniGene infoGene info At4g14965 [Arabidopsis thaliana] gi|110738784|dbj|BAF01315.1| Gene info hypothetical protein [Arabidopsis thaliana] Length=245 Score = 67.0 bits (162), Expect = 2e-11 Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 0/76 (0%) Frame = +1 Query 112 EELKQYDGSDSKKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKD 291 EEL Y+G+D P+L+ I G ++DV++ + YG GG Y FAG+DASRA +F Sbjct 45 EELALYNGTDETLPILLGILGSVFDVTKGKFHYGSGGGYNHFAGRDASRAFVSGNFTGDG 104 Query 292 LTGDISGLGPFELEAL 339 LT + GL E++++ Sbjct 105 LTDSLQGLSSSEVKSI 120 >gi|21536603|gb|AAM60935.1| UniGene info unknown [Arabidopsis thaliana] Length=245 Score = 66.6 bits (161), Expect = 3e-11 Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 0/76 (0%) Frame = +1 Query 112 EELKQYDGSDSKKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKD 291 EEL Y+G+D P+L+ I G ++DV++ + YG GG Y FAG+DASRA +F Sbjct 45 EELALYNGTDETLPILLGILGSVFDVTKGKSHYGSGGGYNHFAGRDASRAFVSGNFTGDG 104 Query 292 LTGDISGLGPFELEAL 339 LT + GL E++++ Sbjct 105 LTDSLQGLSSSEVKSI 120 >gi|24417258|gb|AAN60239.1| UniGene info unknown [Arabidopsis thaliana] Length=170 Score = 66.6 bits (161), Expect = 3e-11 Identities = 31/76 (40%), Positives = 47/76 (61%), Gaps = 0/76 (0%) Frame = +1 Query 112 EELKQYDGSDSKKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKD 291 EEL Y+G+D P+L+ I G ++DV++ + YG GG Y FAG+DASRA +F Sbjct 45 EELALYNGTDETLPILLGILGSVFDVTKGKSHYGSGGGYNHFAGRDASRAFVSGNFTGDG 104 Query 292 LTGDISGLGPFELEAL 339 LT + GL E++++ Sbjct 105 LTDSLQGLSSSEVKSI 120 >gi|38016533|gb|AAR07602.1| fiber protein Fb38 [Gossypium barbadense] Length=168 Score = 65.9 bits (159), Expect = 5e-11 Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 0/80 (0%) Frame = +1 Query 106 TEEELKQYDGSDSKKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEE 285 T EEL Y+G+ P+L+ I G ++DV++ + YG GG Y FAG+DASRA +F Sbjct 37 TVEELALYNGTGDSLPILLGILGSVFDVTKGKSHYGAGGGYNHFAGRDASRAFVSGNFTG 96 Query 286 KDLTGDISGLGPFELEALQG 345 LT + GL E+ ++ G Sbjct 97 DGLTDSLRGLSSTEVHSVVG 116 >gi|38637200|dbj|BAD03451.1| Gene info steroid membrane binding protein-like [Oryza sativa (japonica cultivar-group)] gi|38637364|dbj|BAD03624.1| Gene info steroid membrane binding protein-like [Oryza sativa (japonica cultivar-group)] Length=93 Score = 64.7 bits (156), Expect = 1e-10 Identities = 32/47 (68%), Positives = 38/47 (80%), Gaps = 0/47 (0%) Frame = +1 Query 61 EQMEPLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKGQIYDVSQSR 201 E++ P P PVQ+GEI EEL QYD S+ +KPLLMAIKG+IYDV QSR Sbjct 41 EEVLPPPEPVQVGEIMAEELLQYDRSNPEKPLLMAIKGRIYDVFQSR 87 >gi|115451427|ref|NP_001049314.1| Gene info Os03g0205500 [Oryza sativa (japonica cultivar-group)] gi|113547785|dbj|BAF11228.1| Gene info Os03g0205500 [Oryza sativa (japonica cultivar-group)] Length=318 Score = 58.2 bits (139), Expect = 1e-08 Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 6/85 (7%) Frame = +1 Query 106 TEEELKQYDGSDSKKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSF-E 282 T+EEL Y+G+D P+L+ I G ++DV++ + YGPGG Y FAG +S LAK F Sbjct 34 TKEELAVYNGTDESLPILLGILGSVFDVTKGKSNYGPGGGYHHFAG--SSWKLAKFQFLP 91 Query 283 EKDLTGDISGLGPFE---LEALQGL 348 E D+ G S P ++LQGL Sbjct 92 EIDVIGSASTSFPSSDGLTDSLQGL 116 >gi|5302775|emb|CAB46053.1| hypothetical protein [Arabidopsis thaliana] gi|7268241|emb|CAB78537.1| hypothetical protein [Arabidopsis thaliana] Length=797 Score = 57.8 bits (138), Expect = 1e-08 Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 13/89 (14%) Frame = +1 Query 112 EELKQYDGSDSKKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGK-------------DA 252 EEL Y+G+D P+L+ I G ++DV++ + YG GG Y FAG+ DA Sbjct 627 EELALYNGTDETLPILLGILGSVFDVTKGKFHYGSGGGYNHFAGRFVLLKIMWRDSHIDA 686 Query 253 SRALAKMSFEEKDLTGDISGLGPFELEAL 339 SRA +F LT + GL E++++ Sbjct 687 SRAFVSGNFTGDGLTDSLQGLSSSEVKSI 715 >gi|116060186|emb|CAL56245.1| Putative steroid membrane receptor Hpr6.6/25-Dx (ISS) [Ostreococcus tauri] Length=244 Score = 43.5 bits (101), Expect = 2e-04 Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 1/63 (1%) Frame = +1 Query 145 KKPLLMAIKGQIYDVSQSRMFYGPGGPYAL-FAGKDASRALAKMSFEEKDLTGDISGLGP 321 ++ + +++ G+ +DVS R +Y G YA FAG+DA+RA F E D+ G+ Sbjct 44 RRRIWLSVLGEAFDVSAGRTYYAGDGAYATCFAGRDATRAFGTGDFSESGCVEDVRGMTL 103 Query 322 FEL 330 EL Sbjct 104 GEL 106 >gi|75755967|gb|ABA27039.1| TO82a-3 [Taraxacum officinale] Length=99 Score = 42.7 bits (99), Expect = 4e-04 Identities = 17/25 (68%), Positives = 20/25 (80%), Gaps = 0/25 (0%) Frame = +2 Query 341 KDWEYKFMSKYVKVGTIKKTVPITE 415 +DWEYKFMSKY KVGT+K + P E Sbjct 6 RDWEYKFMSKYAKVGTVKTSEPAPE 30 >gi|108706748|gb|ABF94543.1| cytochrome b5 domain-containing protein, putative [Oryza sativa (japonica cultivar-group)] Length=254 Score = 35.4 bits (80), Expect = 0.068 Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 6/61 (9%) Frame = +1 Query 178 IYDVSQSRMFYGPGGPYALFAGKDASRALAKMSF-EEKDLTGDISGLGPFE---LEALQG 345 ++DV++ + YGPGG Y FAG +S LAK F E D+ G S P ++LQG Sbjct 52 VFDVTKGKSNYGPGGGYHHFAG--SSWKLAKFQFLPEIDVIGSASTSFPSSDGLTDSLQG 109 Query 346 L 348 L Sbjct 110 L 110 >gi|71068109|gb|AAZ23034.1| delta-6 desaturase-related protein [Echium pitardii var. pitardii] Length=448 Score = 34.7 bits (78), Expect = 0.12 Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 6/55 (10%) Frame = +1 Query 103 ITEEELKQYDGSDSKKPLLMAIKGQIYDVSQSRMFYGPGGPYAL--FAGKDASRA 261 IT +ELK++D D L ++I+G+IYDVS + PGG Y L AG+D + A Sbjct 9 ITTDELKKHDKPDD---LWISIQGKIYDVSNWLKDH-PGGHYPLTSLAGQDVTDA 59 >gi|30350277|gb|AAP23034.1| fatty acid delta-6 desaturase [Primula farinosa] Length=453 Score = 33.9 bits (76), Expect = 0.20 Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 6/63 (9%) Frame = +1 Query 79 PPPVQLGEITEEELKQYDGSDSKKPLLMAIKGQIYDVSQSRMFYGPGG--PYALFAGKDA 252 PP + G IT +LK ++ + L ++I GQ+YDVS + PGG P AG D Sbjct 6 PPNPKTGYITSSDLKSHNKAGD---LWISIHGQVYDVSSWAALH-PGGTAPLMALAGHDV 61 Query 253 SRA 261 + A Sbjct 62 TDA 64 >gi|30350275|gb|AAP23033.1| sphingolipid delta-8 desaturase [Primula farinosa] Length=452 Score = 33.5 bits (75), Expect = 0.26 Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 6/63 (9%) Frame = +1 Query 79 PPPVQLGEITEEELKQYDGSDSKKPLLMAIKGQIYDVSQSRMFYGPGG--PYALFAGKDA 252 PP + G IT +LK ++ + L ++I GQ+YDVS + PGG P AG D Sbjct 5 PPNPKTGYITSSDLKAHNKAGD---LWISIHGQVYDVSSWAALH-PGGTAPLMALAGHDV 60 Query 253 SRA 261 + A Sbjct 61 TDA 63 >gi|30350281|gb|AAP23036.1| fatty acid delta-6 desaturase [Primula vialii] Length=453 Score = 32.3 bits (72), Expect = 0.57 Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 4/62 (6%) Frame = +1 Query 79 PPPVQLGEITEEELKQYDGSDSKKPLLMAIKGQIYDVSQ-SRMFYGPGGPYALFAGKDAS 255 PP + G IT +LK G + L ++I G++YDVS + + G P AG D + Sbjct 6 PPNPKTGYITSSDLK---GHNKAGDLWISIHGEVYDVSSWAGLHPGGSAPLMALAGHDVT 62 Query 256 RA 261 A Sbjct 63 DA 64 >gi|71068111|gb|AAZ23035.1| delta-6 desaturase [Echium sabulicola] Length=448 Score = 31.2 bits (69), Expect = 1.3 Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 6/55 (10%) Frame = +1 Query 103 ITEEELKQYDGSDSKKPLLMAIKGQIYDVSQSRMFYGPGGPYAL--FAGKDASRA 261 IT EELK++D + L ++I+G+IYDVS + PGG + L AG++ + A Sbjct 9 ITAEELKKHD---KEGDLWISIQGKIYDVSDWLKEH-PGGKFPLLSLAGQEVTDA 59 >gi|92868038|gb|ABE78138.1| RNA-directed DNA polymerase (Reverse transcriptase); Endonuclease/exonuclease/phosphatase [Medicago truncatula] Length=1198 Score = 30.8 bits (68), Expect = 1.7 Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 9/79 (11%) Frame = +1 Query 34 QHLRNRAFEEQMEPLPPPVQLGEITEEELKQYDGSDSKKP-LLMAIKGQIYDVSQSRMFY 210 QH +N F+ ++P P +G +T + L DG+D KP LL K ++D F Sbjct 352 QHFQNN-FKRTLQPRP---DMGGLTFKSLSVSDGADLIKPFLLEENKAAVWDCDS---FK 404 Query 211 GPGGPYALFAGKDASRALA 267 P GPY L ++ + +A Sbjct 405 SP-GPYVLIPKVESPQRVA 422 >gi|22652111|gb|AAN03619.1|AF406816_1 sphingolipid long chain base delta 8 desaturase [Aquilegia vulgaris] Length=446 Score = 30.8 bits (68), Expect = 1.7 Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 6/56 (10%) Frame = +1 Query 100 EITEEELKQYDGSDSKKPLLMAIKGQIYDVSQSRMFYGPGG--PYALFAGKDASRA 261 EIT EELK+++ + ++I+G+IYDVS+ + PGG P AG+D + A Sbjct 7 EITSEELKKHNKHGD---IWISIQGKIYDVSEWIKDH-PGGEAPLLNLAGQDVTDA 58 >gi|18403775|ref|NP_565801.1| UniGene infoGene info ATP binding / DNA binding [Arabidopsis thaliana] gi|3668084|gb|AAC61816.1| Gene info expressed protein [Arabidopsis thaliana] gi|21553727|gb|AAM62820.1| UniGene infoGene info zinc finger protein Glo3-like [Arabidopsis thaliana] gi|110738611|dbj|BAF01231.1| Gene info hypothetical protein [Arabidopsis thaliana] Length=395 Score = 30.8 bits (68), Expect = 1.7 Identities = 38/133 (28%), Positives = 56/133 (42%), Gaps = 24/133 (18%) Frame = +1 Query 37 HLRNRAFEEQMEP-----LPPPVQLGEITEEELKQYDGSDSKKPLLMAIKGQIYDVSQSR 201 +++NR E+ M P + PP G EEEL+ G KKP+ + K QI + ++R Sbjct 243 NVQNR--EDYMSPQVVSHVAPPKSSG-FFEEELEMNGGRFQKKPITSSSKLQIQETDEAR 299 Query 202 MFY--GPGGPYALFAGKD-------ASRALAKMS----FEEKDLTGDISGLGPFELEA-- 336 + A + G D A +L K S DL GD G P +L A Sbjct 300 KKFTNAKSISSAQYFGNDNNSADLEAKSSLKKFSGSSAISSADLFGDGDGDFPLDLTAGD 359 Query 337 -LQGLGVQVHEQV 372 L L +Q + + Sbjct 360 LLNRLSLQAQQDI 372 >gi|70795233|gb|AAZ08559.1| delta-6 desaturase [Echium plantagineum] Length=448 Score = 30.8 bits (68), Expect = 1.7 Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 6/55 (10%) Frame = +1 Query 103 ITEEELKQYDGSDSKKPLLMAIKGQIYDVSQSRMFYGPGGPYAL--FAGKDASRA 261 IT EELK++D + L ++I+G+IYDVS + PGG + L AG++ + A Sbjct 9 ITAEELKKHDKAGD---LWISIQGKIYDVSDWLKDH-PGGNFPLLSLAGQEVTDA 59 >gi|92876082|gb|ABE83827.1| RNA-directed DNA polymerase (Reverse transcriptase); Endonuclease/exonuclease/phosphatase [Medicago truncatula] Length=1221 Score = 30.0 bits (66), Expect = 2.8 Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 9/71 (12%) Frame = +1 Query 34 QHLRNRAFEEQMEPLPPPVQLGEITEEELKQYDGSDSKKP-LLMAIKGQIYDVSQSRMFY 210 QH +N F+ ++P P +G +T + L DG+D KP LL K ++D F Sbjct 352 QHFQNN-FKRTLQPRP---DMGGLTFKSLSVSDGADLIKPFLLEENKAAVWDCDS---FK 404 Query 211 GPGGPYALFAG 243 P GPY + G Sbjct 405 SP-GPYGINLG 414 >gi|93280154|gb|ABF06705.1| Joka8 [Nicotiana plumbaginifolia] Length=360 Score = 29.6 bits (65), Expect = 3.7 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 0/47 (0%) Frame = -1 Query 178 SGP*WP*GVASWNPNHHTA*VPPR*SRRAGPEEGVAPSAPRKPYSVD 38 S P WP SW+P+HH P + +G + PS P + + D Sbjct 49 SSPCWPDLSKSWDPHHHHLSPPLPPNPSSGDDHQPPPSNPLQHFQYD 95 >gi|15235978|ref|NP_193447.1| UniGene infoGene info unknown protein [Arabidopsis thaliana] gi|2245072|emb|CAB10495.1| Gene info hypothetical protein [Arabidopsis thaliana] gi|7268465|emb|CAB80985.1| Gene info hypothetical protein [Arabidopsis thaliana] Length=1322 Score = 29.6 bits (65), Expect = 3.7 Identities = 24/93 (25%), Positives = 37/93 (39%), Gaps = 15/93 (16%) Frame = +1 Query 127 YDGSDSKKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDI 306 +D DS+K ++G +Y S S G D S + E+KD Sbjct 746 FDSEDSRKTWHSRLQGAVYRASGSAPIAGLS---------DTSSDSEESETEQKD----- 791 Query 307 SGLGPFELEALQGLGVQVHEQVC*GWNHQEDCS 405 G LE++ GV ++C + HQ+D S Sbjct 792 -GFDLSNLESVYVTGVLDELKICFSYGHQDDAS 823 >gi|115467948|ref|NP_001057573.1| Gene info Os06g0342600 [Oryza sativa (japonica cultivar-group)] gi|54290952|dbj|BAD61633.1| Gene info DTW domain-containing protein-like [Oryza sativa (japonica cultivar-group)] gi|113595613|dbj|BAF19487.1| Gene info Os06g0342600 [Oryza sativa (japonica cultivar-group)] Length=237 Score = 29.3 bits (64), Expect = 4.9 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 4/60 (6%) Frame = +1 Query 52 AFEEQMEPLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKGQIYDV----SQSRMFYGPG 219 A E + E LPP GE+T EE +++ S + A+ G++ ++ Q F G G Sbjct 125 AEEAEEEALPPVTGPGEVTAEEWRRWGTSSPLPAAVAAVVGELLEMEAEAGQKMRFGGVG 184 >gi|57900267|dbj|BAD87085.1| putative serine/threonine Kinase [Oryza sativa (japonica cultivar-group)] Length=501 Score = 28.9 bits (63), Expect = 6.3 Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 4/48 (8%) Frame = +1 Query 28 GDQHLRNRAF---EEQMEPLPPPVQLGEITEEELKQYDGSDSKKPLLM 162 GD+HL +++ E+Q PLPP + ++ + L Q + D +P L+ Sbjct 436 GDEHLNSQSILQGEQQQSPLPPELPQDQL-QPSLPQQEKQDMPEPPLL 482 >gi|115440771|ref|NP_001044665.1| Gene info Os01g0824600 [Oryza sativa (japonica cultivar-group)] gi|113534196|dbj|BAF06579.1| Gene info Os01g0824600 [Oryza sativa (japonica cultivar-group)] Length=502 Score = 28.9 bits (63), Expect = 6.3 Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 4/48 (8%) Frame = +1 Query 28 GDQHLRNRAF---EEQMEPLPPPVQLGEITEEELKQYDGSDSKKPLLM 162 GD+HL +++ E+Q PLPP + ++ + L Q + D +P L+ Sbjct 437 GDEHLNSQSILQGEQQQSPLPPELPQDQL-QPSLPQQEKQDMPEPPLL 483 >gi|116058719|emb|CAL54426.1| 1,3-beta-glucan synthase/callose synthase catalytic subunit (ISS) [Ostreococcus tauri] Length=4544 Score = 28.5 bits (62), Expect = 8.3 Identities = 18/29 (62%), Positives = 18/29 (62%), Gaps = 1/29 (3%) Frame = +3 Query 30 GSTSTE*GFRGADGATPSSGPARRDYRGG 116 GSTS E G RG GAT S G AR D R G Sbjct 54 GSTSGEWGARGGGGAT-SDGRARVDAREG 81 >gi|92879639|gb|ABE85658.1| Cyclin-like F-box [Medicago truncatula] Length=481 Score = 28.5 bits (62), Expect = 8.3 Identities = 34/147 (23%), Positives = 56/147 (38%), Gaps = 36/147 (24%) Frame = -2 Query 423 CQSSVIGTVFLMVPTLTYLLMNLYSQSLQSLQFEWTKA*DIPS*ILFFKRHLCKSSASIL 244 CQ + L + L+ + Q L ++Q + D+ + L R CK + +I Sbjct 143 CQELTHNALDLSLVHLSLIFGCSLLQELYTVQCSGYECVDLSAPTLTVFRIQCKCNHAIK 202 Query 243 SSKQCIRSTGSVKHSALRNIIDLALDGHEEWLLGIRTI---------------------- 130 S C+ +N+IDL L + + + G+ I Sbjct 203 SI--CLEKA--------KNLIDLTLIVYRDGISGLNNILPKIQRLTVGLDSKMLYADIIH 252 Query 129 ----ILLKFLLGNLAELDRRREWLHLL 61 I LK+L N+ LDRR E LH++ Sbjct 253 PSQLISLKYLKLNIVNLDRREELLHIV 279 >gi|6692693|gb|AAF24827.1|AC007592_20 F12K11.6 [Arabidopsis thaliana] Length=2025 Score = 28.5 bits (62), Expect = 8.3 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 10/54 (18%) Frame = +1 Query 16 FGSSGDQHLRNRA----------FEEQMEPLPPPVQLGEITEEELKQYDGSDSK 147 +G S D+ L++R FE+ + P+PPP+++ DGS+SK Sbjct 790 YGESDDERLQSRLESKNKLGSFDFEKFLFPIPPPIKITVSPHPSDSGGDGSNSK 843
  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 15, 2007  4:53 AM
  Number of letters in database: 101,054,579
  Number of sequences in database:  283,349
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283349
Number of Hits to DB: 304
Number of extensions: 1
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 424
Length of database: 101054579
Length adjustment: 102
Effective length of query: 322
Effective length of database: 72152981
Effective search space: 2813966259
Effective search space used: 2813966259
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 61 (28.1 bits)