RID=1169015850-19583-43573641395.BLASTQ4, Contig391

BLASTX 2.2.15 [Oct-15-2006]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1169015850-19583-43573641395.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,460,989 sequences; 1,533,424,333 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Query=  Contig391
Length=536

Distribution of 12 Blast Hits on the Query Sequence

                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|92867765|gb|ABE77904.1|  TPR repeat [Medicago truncatula] >...   111    2e-24
gi|90399339|emb|CAJ86110.1|  H0811D08.1 [Oryza sativa (indica cul  72.8    7e-13
gi|38344005|emb|CAE03171.2|  OSJNBa0070O11.2 [Oryza sativa (japon  72.8    7e-13 
gi|5103827|gb|AAD39657.1|AC007591_22  ESTs gb|F20110 and gb|F2...  48.9    1e-05
gi|79345548|ref|NP_172981.2|  unknown protein [Arabidopsis thalia  48.9    1e-05 
gi|92867014|gb|ABE77466.1|  PWWP; Regulation of nuclear pre-mR...  32.0    1.4  
gi|92898725|gb|ABE94298.1|  Basic-leucine zipper (bZIP) transc...  30.8    3.0  
gi|70671597|gb|AAZ06230.1|  hypothetical protein TQH17P5.8 [Or...  30.4    4.0  
gi|15232389|ref|NP_188722.1|  ATP binding / kinase/ protein ki...  29.6    6.8   
gi|38346968|emb|CAE02264.2|  OSJNBb0049I21.4 [Oryza sativa (japon  29.6    6.8   
gi|9294413|dbj|BAB02494.1|  kinase-like protein [Arabidopsis thal  29.6    6.8  
gi|115486101|ref|NP_001068194.1|  Os11g0592600 [Oryza sativa (...  29.3    8.8

Alignments

 

>gi|92867765|gb|ABE77904.1|  TPR repeat [Medicago truncatula]
 gi|92874825|gb|ABE83025.1|  TPR repeat [Medicago truncatula]
Length=1638

 Score =  111 bits (277),  Expect = 2e-24
 Identities = 62/116 (53%), Positives = 78/116 (67%), Gaps = 6/116 (5%)
 Frame = +2

Query  44    LARQILLSFIVRSVKQNMNPASEPAVSDKRHNRTENSSDAVTNDSAIIKILHGHEGKDLD  223
             +ARQILLSF+V+SV QN +   EP VS+ +    ENSSD V  DSA+IKI++G E K+  
Sbjct  1529  IARQILLSFLVKSVHQNADAVDEPKVSEGKVESFENSSDEVAKDSAVIKIMYGTEEKNKT  1588

Query  224   SQPSSCEEPKASDVNKKKTGDGEGFIVVTKRRRNRQQFTNGVTGLYNQQSICASVR  391
                SS       D  ++   DGEGF+VVT RR++RQ+ TNGV  LYNQ SICASVR
Sbjct  1589  VVNSS------DDSEEQDNLDGEGFVVVTNRRKSRQKTTNGVAELYNQPSICASVR  1638


>gi|90399339|emb|CAJ86110.1|  H0811D08.1 [Oryza sativa (indica cultivar-group)]
Length=959

 Score = 72.8 bits (177),  Expect = 7e-13
 Identities = 49/115 (42%), Positives = 70/115 (60%), Gaps = 12/115 (10%)
 Frame = +2

Query  44   LARQILLSFIVRSVKQNMNPASEPAVSDKRHNRTENSSDAVTNDSAIIKILHGHEGKDLD  223
            LARQIL SFIV+SV  ++   S  A SD++ +  + S +A ++++ I K   G   K+LD
Sbjct  856  LARQILFSFIVKSVHDSLG--STGAESDRKPSGPDESGNAQSSNN-INKSPSGR--KELD  910

Query  224  SQPSSCEEPKASDVNKKKTGDGEGFIVVTKRRRNRQQFTNGVTGLYNQQSICASV  388
             Q  +   PK+         D EGF VV+KRRR++Q F + + GLY+QQSIC SV
Sbjct  911  KQQKATVVPKSEK-------DTEGFTVVSKRRRSKQHFVHPIHGLYSQQSICTSV  958


>gi|38344005|emb|CAE03171.2|  OSJNBa0070O11.2 [Oryza sativa (japonica cultivar-group)]
Length=1720

 Score = 72.8 bits (177),  Expect = 7e-13
 Identities = 49/115 (42%), Positives = 70/115 (60%), Gaps = 12/115 (10%)
 Frame = +2

Query  44    LARQILLSFIVRSVKQNMNPASEPAVSDKRHNRTENSSDAVTNDSAIIKILHGHEGKDLD  223
             LARQIL SFIV+SV  ++   S  A SD++ +  + S +A ++++ I K   G   K+LD
Sbjct  1617  LARQILFSFIVKSVHDSLG--STGAESDRKPSGPDESGNAQSSNN-INKSPSGR--KELD  1671

Query  224   SQPSSCEEPKASDVNKKKTGDGEGFIVVTKRRRNRQQFTNGVTGLYNQQSICASV  388
              Q  +   PK+         D EGF VV+KRRR++Q F + + GLY+QQSIC SV
Sbjct  1672  KQQKATVVPKSEK-------DTEGFTVVSKRRRSKQHFVHPIHGLYSQQSICTSV  1719


>gi|5103827|gb|AAD39657.1|AC007591_22  ESTs gb|F20110 and gb|F20109 come from this gene. [Arabidopsis 
thaliana]
Length=1604

 Score = 48.9 bits (115),  Expect = 1e-05
 Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 23/116 (19%)
 Frame = +2

Query  44    LARQILLSFIVRSVKQNMNPASEPAVSDKRHNRTENSSDAVTNDSAIIKILHGHEGKDLD  223
             L ++ L SFIV+S ++ +     PA   K     E+   +   DSA+ +I++  E     
Sbjct  1509  LKKRELASFIVKSSQKEV-----PAALSKTSPEAESGGTS-EKDSAVTEIVYSRE-----  1557

Query  224   SQPSSCEEPKASDVNKKKTGDGEGFIVVTKRRR--NRQQFTNGVTGLYNQ-QSICA  382
                      + +  N  +T  GEGF++V K+RR  N+ + TN   GLY+Q  S+CA
Sbjct  1558  ---------EENGANANETNGGEGFVIVAKKRRRKNKVRLTNVAAGLYHQPSSVCA  1604


>gi|79345548|ref|NP_172981.2|  unknown protein [Arabidopsis thaliana]
Length=1621

 Score = 48.9 bits (115),  Expect = 1e-05
 Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 23/116 (19%)
 Frame = +2

Query  44    LARQILLSFIVRSVKQNMNPASEPAVSDKRHNRTENSSDAVTNDSAIIKILHGHEGKDLD  223
             L ++ L SFIV+S ++ +     PA   K     E+   +   DSA+ +I++  E     
Sbjct  1526  LKKRELASFIVKSSQKEV-----PAALSKTSPEAESGGTS-EKDSAVTEIVYSRE-----  1574

Query  224   SQPSSCEEPKASDVNKKKTGDGEGFIVVTKRRR--NRQQFTNGVTGLYNQ-QSICA  382
                      + +  N  +T  GEGF++V K+RR  N+ + TN   GLY+Q  S+CA
Sbjct  1575  ---------EENGANANETNGGEGFVIVAKKRRRKNKVRLTNVAAGLYHQPSSVCA  1621


>gi|92867014|gb|ABE77466.1|  PWWP; Regulation of nuclear pre-mRNA protein [Medicago truncatula]
Length=1396

 Score = 32.0 bits (71),  Expect = 1.4
 Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 6/117 (5%)
 Frame = +2

Query  146  ENSSDAVTNDSAIIKILHGHEGKDLDS---QPSSCEEPKASDVNKKKTGDGEGFIVVTKR  316
            +NSS+ +TNDS    +   +EG  +DS      + E P+  ++NK      +G +   KR
Sbjct  297  DNSSEILTNDSDEFSL---NEGSAMDSNFKHTETSECPEEVELNKGLDLKIKGVVNKKKR  353

Query  317  RRNRQQFTNGVTGLYNQQSICASVR*REMLSQNGENNKESVTLFQSLRFYLLARQKW  487
              NR++ TN  +    +      VR     SQN   N E     Q    +L   ++W
Sbjct  354  NPNRKRATNDTSKPTIRVEEELGVRNSSQSSQNICRNSEERCFEQDGDEHLPLVKRW  410


>gi|92898725|gb|ABE94298.1|  Basic-leucine zipper (bZIP) transcription factor [Medicago truncatula]
Length=259

 Score = 30.8 bits (68),  Expect = 3.0
 Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
 Frame = +2

Query  122  SDKRHNRTENSSDAVTNDSAIIKILHGHEGKDLDSQPSSCEEPKASDVNKKK  277
            S+K H R+ + S A  N+  I++  H  E K +DSQPS  ++  +   + K+
Sbjct  86   SNKTHRRSSSDSLAYLNNKTILQ--HSPERKVVDSQPSFLQQHHSRSDHSKR  135


>gi|70671597|gb|AAZ06230.1|  hypothetical protein TQH17P5.8 [Oryza sativa (indica cultivar-group)]
 gi|70671603|gb|AAZ06235.1|  hypothetical protein TQH17P5.8 [Oryza sativa (indica cultivar-group)]
Length=241

 Score = 30.4 bits (67),  Expect = 4.0
 Identities = 22/87 (25%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
 Frame = +2

Query  107  SEPAVSDKRHNRTENSSDA---VTNDSAIIKILHGHEGKDLDSQPSSCEEPKASDVNKKK  277
            + P  SD   + +++SS++   VT+D   I +  GH  +++DS+ ++  E   S+ + ++
Sbjct  24   ANPWYSDDGSDGSKSSSESERTVTDDYFGIFVHPGHGDQEVDSRKANRHEADHSETDSER  83

Query  278  TGDGEGFIVVTKRRRNRQQFTNGVTGL  358
            TG   G   +     N   F++  +GL
Sbjct  84   TGSA-GLGKIANSAGNSHHFSDVDSGL  109


>gi|15232389|ref|NP_188722.1|  ATP binding / kinase/ protein kinase/ protein serine/threonine 
kinase/ protein-tyrosine kinase [Arabidopsis thaliana]
Length=427

 Score = 29.6 bits (65),  Expect = 6.8
 Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
 Frame = +2

Query  89   QNMNPASEPAVSDKRHNRTENSSD-AVTNDSAIIKILHGHEGKDLDSQPSSCEEPKASDV  265
            QN++P  +P VS   HN  EN +       SA   I H  E ++ + +    ++  +S  
Sbjct  276  QNLSPVFKPVVSKSEHNTNENRTGLPPKTKSAKTPIKHNQESEETEKKN---KDTSSSSK  332

Query  266  NKKKTGDGEGFIVVT  310
            +K++    +   V++
Sbjct  333  DKERPAKSQEMSVIS  347


>gi|38346968|emb|CAE02264.2|  OSJNBb0049I21.4 [Oryza sativa (japonica cultivar-group)]
Length=972

 Score = 29.6 bits (65),  Expect = 6.8
 Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
 Frame = +2

Query  200  GHEGKDLDSQPSSCEEPKASDVNKKKTGDGEGFIVVTKRRRNRQQFTNGVTGL  358
            G   KDL ++ S   E   SD+N   +G GEG     K   N   F N V G+
Sbjct  500  GTSNKDLTNKSSDHVEGNESDLNDNSSGHGEGIGSGNKHLSN--NFLNHVEGI  550


>gi|9294413|dbj|BAB02494.1|  kinase-like protein [Arabidopsis thaliana]
Length=416

 Score = 29.6 bits (65),  Expect = 6.8
 Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
 Frame = +2

Query  89   QNMNPASEPAVSDKRHNRTENSSD-AVTNDSAIIKILHGHEGKDLDSQPSSCEEPKASDV  265
            QN++P  +P VS   HN  EN +       SA   I H  E ++ + +    ++  +S  
Sbjct  265  QNLSPVFKPVVSKSEHNTNENRTGLPPKTKSAKTPIKHNQESEETEKKN---KDTSSSSK  321

Query  266  NKKKTGDGEGFIVVT  310
            +K++    +   V++
Sbjct  322  DKERPAKSQEMSVIS  336


>gi|115486101|ref|NP_001068194.1|  Os11g0592600 [Oryza sativa (japonica cultivar-group)]
 gi|77551764|gb|ABA94561.1|  Targeting protein for Xklp2 containing protein, expressed [Oryza 
sativa (japonica cultivar-group)]
 gi|113645416|dbj|BAF28557.1|  Os11g0592600 [Oryza sativa (japonica cultivar-group)]
Length=407

 Score = 29.3 bits (64),  Expect = 8.8
 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 7/68 (10%)
 Frame = +2

Query  83   VKQNMNPASEPAVSDKRHNRTENSSDAVTNDSAIIKILHGHEGKDLDSQPSSCEEPKASD  262
            V+Q+ N  SEP  SD  +  TEN     +  S             ++S+P + E  +AS 
Sbjct  50   VEQSDNSISEPLESDGANGATENVVPLASEKST-------DNNDAMNSEPVNSEPYEASP  102

Query  263  VNKKKTGD  286
             N  + GD
Sbjct  103  ANNAEKGD  110

  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 16, 2007  5:53 PM
  Number of letters in database: 101,065,385
  Number of sequences in database:  283,397
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283397
Number of Hits to DB: 301
Number of extensions: 5
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 536
Length of database: 101065385
Length adjustment: 106
Effective length of query: 430
Effective length of database: 71025303
Effective search space: 5113821816
Effective search space used: 5113821816
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 64 (29.3 bits)