Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1169015850-19583-43573641395.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,460,989 sequences; 1,533,424,333 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig391 Length=536
Score E Sequences producing significant alignments: (Bits) Value gi|92867765|gb|ABE77904.1| TPR repeat [Medicago truncatula] >... 111 2e-24 gi|90399339|emb|CAJ86110.1| H0811D08.1 [Oryza sativa (indica cul 72.8 7e-13 gi|38344005|emb|CAE03171.2| OSJNBa0070O11.2 [Oryza sativa (japon 72.8 7e-13 gi|5103827|gb|AAD39657.1|AC007591_22 ESTs gb|F20110 and gb|F2... 48.9 1e-05 gi|79345548|ref|NP_172981.2| unknown protein [Arabidopsis thalia 48.9 1e-05 gi|92867014|gb|ABE77466.1| PWWP; Regulation of nuclear pre-mR... 32.0 1.4 gi|92898725|gb|ABE94298.1| Basic-leucine zipper (bZIP) transc... 30.8 3.0 gi|70671597|gb|AAZ06230.1| hypothetical protein TQH17P5.8 [Or... 30.4 4.0 gi|15232389|ref|NP_188722.1| ATP binding / kinase/ protein ki... 29.6 6.8 gi|38346968|emb|CAE02264.2| OSJNBb0049I21.4 [Oryza sativa (japon 29.6 6.8 gi|9294413|dbj|BAB02494.1| kinase-like protein [Arabidopsis thal 29.6 6.8 gi|115486101|ref|NP_001068194.1| Os11g0592600 [Oryza sativa (... 29.3 8.8
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 16, 2007 5:53 PM Number of letters in database: 101,065,385 Number of sequences in database: 283,397 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283397 Number of Hits to DB: 301 Number of extensions: 5 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 536 Length of database: 101065385 Length adjustment: 106 Effective length of query: 430 Effective length of database: 71025303 Effective search space: 5113821816 Effective search space used: 5113821816 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 64 (29.3 bits)