Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1169016181-4786-83056520125.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,460,989 sequences; 1,533,424,333 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig394 Length=554
Score E Sequences producing significant alignments: (Bits) Value gi|5031279|gb|AAD38145.1|AF139498_1 porin [Prunus armeniaca] 245 8e-65 gi|36957198|gb|AAQ87021.1| VDAC1.3 [Lotus corniculatus var. japo 244 1e-64 gi|1256259|gb|AAA96275.1| voltage-dependent anion channel protei 242 7e-64 gi|1172556|sp|P42056|VDAC2_SOLTU 36 kDa outer mitochondrial m... 240 3e-63 gi|629728|pir||S46959 porin I, 36K - potato >gi|515358|emb|CA... 238 1e-62 gi|1172555|sp|P42055|VDAC1_SOLTU 34 kDa outer mitochondrial m... 226 3e-59 gi|36957183|gb|AAQ87020.1| VDAC1.2 [Lotus corniculatus var. japo 223 3e-58 gi|67848430|gb|AAY82249.1| mitochrondrial voltage-dependent a... 221 2e-57 gi|1724100|gb|AAB38498.1| porin [Mesembryanthemum crystallinum] 219 5e-57 gi|83283993|gb|ABC01904.1| 34 kDa outer mitochondrial membran... 216 4e-56 gi|106879666|emb|CAJ42303.1| VDAC-like porin [Plantago major] 216 6e-56 gi|36957170|gb|AAQ87019.1| VDAC1.1 [Lotus corniculatus var. japo 214 1e-55 gi|1172558|sp|P42054|VDAC_PEA Outer plastidial membrane prote... 209 5e-54 gi|56693621|gb|AAW22621.1| outer mitochondrial membrane protein 200 2e-51 gi|21593558|gb|AAM65525.1| putative porin [Arabidopsis thaliana] 200 3e-51 gi|15232074|ref|NP_186777.1| voltage-gated ion-selective chan... 200 3e-51 gi|625990|pir||B55017 porin, plastid - garden pea 199 5e-51 gi|44894747|gb|AAS48868.1| voltage-dependent anion-selective ... 197 3e-50 gi|115478779|ref|NP_001062983.1| Os09g0361400 [Oryza sativa (... 197 3e-50 gi|5929928|gb|AAD56651.1|AF178950_1 voltage-dependent anion chan 196 3e-50 gi|83032228|gb|ABB97031.1| unknown [Brassica rapa] 196 3e-50 gi|21553387|gb|AAM62480.1| voltage-dependent anion-selective ... 196 3e-50 gi|42601787|gb|AAS21632.1| voltage-dependent anion-selective ... 195 1e-49 gi|15242210|ref|NP_197013.1| voltage-gated ion-selective chan... 194 1e-49 gi|5929930|gb|AAD56652.1|AF178951_1 voltage-dependent anion chan 192 5e-49 gi|92871790|gb|ABE80696.1| Porin, eukaryotic type [Medicago trun 189 6e-48 gi|1172553|sp|P46274|VDAC1_WHEAT Outer mitochondrial membrane... 186 5e-47 gi|115438000|ref|NP_001043433.1| Os01g0588200 [Oryza sativa (... 173 3e-43 gi|558652|emb|CAA57646.1| Voltage dependent anion channel (VDAC) 171 1e-42 gi|1172557|sp|P42057|VDAC_MAIZE Outer plastidial membrane pro... 162 9e-40 gi|115465125|ref|NP_001056162.1| Os05g0536200 [Oryza sativa (... 158 1e-38 gi|5929932|gb|AAD56653.1|AF178952_1 voltage-dependent anion chan 153 3e-37 gi|15637165|gb|AAL04449.1| voltage-dependent anion channel [Beta 153 4e-37 gi|115450603|ref|NP_001048902.1| Os03g0137500 [Oryza sativa (... 150 4e-36 gi|56693623|gb|AAW22622.1| porin-like protein [Brassica napus] 147 2e-35 gi|15240765|ref|NP_201551.1| voltage-gated ion-selective chan... 147 2e-35 gi|60279272|emb|CAA63968.1| pom30 [Solanum tuberosum] 147 3e-35 gi|3747046|gb|AAC64164.1| voltage-dependent anion-selective chan 144 2e-34 gi|115451401|ref|NP_001049301.1| Os03g0202200 [Oryza sativa (... 140 2e-33 gi|36957216|gb|AAQ87022.1| VDAC2.1 [Lotus corniculatus var. japo 140 4e-33 gi|31249532|gb|AAP46186.1| PgPOR29 [Pennisetum glaucum] >gi|5... 140 4e-33 gi|92866964|gb|ABE77437.1| Porin, eukaryotic type [Medicago trun 139 9e-33 gi|558650|emb|CAA57647.1| Voltage dependent anion channel (VDAC) 139 9e-33 gi|77999247|gb|ABB16970.1| POM30-like protein [Solanum tuberosum 138 1e-32 gi|36957233|gb|AAQ87023.1| VDAC3.1 [Lotus corniculatus var. japo 132 1e-30 gi|15242146|ref|NP_200557.1| voltage-gated ion-selective chan... 130 3e-30 gi|92429661|gb|ABE77194.1| putative voltage-dependent ion channe 115 8e-26 gi|115439567|ref|NP_001044063.1| Os01g0715500 [Oryza sativa (... 105 8e-23 gi|57899671|dbj|BAD87377.1| putative 36kDA porin II [Oryza sa... 102 9e-22 gi|75755825|gb|ABA26972.1| TO25b-23rc [Taraxacum officinale] 99.0 1e-20 gi|108706719|gb|ABF94514.1| Eukaryotic porin family protein, ... 92.4 9e-19 gi|15229642|ref|NP_190561.1| voltage-gated ion-selective chan... 82.4 1e-15 gi|77745473|gb|ABB02635.1| unknown [Solanum tuberosum] 52.0 1e-06 gi|58429946|gb|AAW78347.1| target of rapamycin [Zea mays] 33.9 0.39 gi|115486609|ref|NP_001068448.1| Os11g0676800 [Oryza sativa (... 30.8 3.3 gi|30697784|ref|NP_177065.2| prolyl oligopeptidase/ serine-ty... 30.0 5.6 gi|12323208|gb|AAG51580.1|AC011665_1 putative protease [Arabidop 29.6 7.3 gi|116060433|emb|CAL55769.1| unnamed protein product [Ostreococc 29.3 9.6 gi|92876634|gb|ABE84004.1| Lysyl-tRNA synthetase, class-2; Am... 29.3 9.6
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 16, 2007 5:53 PM Number of letters in database: 101,065,385 Number of sequences in database: 283,397 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283397 Number of Hits to DB: 404 Number of extensions: 4 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 554 Length of database: 101065385 Length adjustment: 106 Effective length of query: 448 Effective length of database: 71025303 Effective search space: 5539973634 Effective search space used: 5539973634 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 64 (29.3 bits)