Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168928571-11380-41601555243.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig4 Length=400
Score E Sequences producing significant alignments: (Bits) Value gi|4091806|gb|AAC99310.1| CONSTANS-like protein 2 [Malus x domes 53.1 6e-20 gi|4091804|gb|AAC99309.1| CONSTANS-like protein 1 [Malus x domes 52.4 3e-19 gi|118406898|gb|ABF56053.2| CONSTANS [Solanum tuberosum] 43.5 1e-11 gi|58430585|dbj|BAD89084.1| PpCOL1 [Physcomitrella patens] >g... 43.1 2e-11 gi|66841020|emb|CAI64585.1| CONSTANS-like 3 [Physcomitrella pate 41.6 3e-11 gi|45544885|gb|AAS67378.1| CONSTANS 2 [Lycopersicon esculentum] 42.7 3e-11 gi|66841018|emb|CAI64584.1| CONSTANS-like 2 [Physcomitrella pate 40.0 4e-11 gi|4557093|gb|AAD22518.1|AF001136_1 zinc finger protein [Pinus r 43.5 2e-09 gi|2895184|gb|AAC27694.1| constans [Brassica napus] 42.4 3e-09 gi|60459257|gb|AAX20015.1| CONSTANS-like b [Pisum sativum] 58.5 7e-09 gi|61611682|gb|AAX47173.1| CONSTANS-LIKE b [Pisum sativum] 58.2 9e-09 gi|11037308|gb|AAG27546.1| constans-like protein [Brassica nigra 40.8 1e-08 gi|2895186|gb|AAC27695.1| CONSTANS homolog [Brassica napus] 39.7 2e-08 gi|2895188|gb|AAC27696.1| CONSTANS homolog [Brassica napus] 39.7 2e-08 gi|116010475|emb|CAL29797.1| CONSTANS protein [Brassica olera... 39.3 2e-08 gi|15450659|gb|AAK96601.1| AT5g24930/F6A4_140 [Arabidopsis th... 54.7 1e-07 gi|30689668|ref|NP_197875.2| transcription factor/ zinc ion bind 54.7 1e-07 gi|52840166|sp|Q940T9|COL4_ARATH Zinc finger protein CONSTANS-LI 54.7 1e-07 gi|42570913|ref|NP_973530.1| zinc ion binding [Arabidopsis thali 52.8 4e-07 gi|15224620|ref|NP_180052.1| transcription factor/ zinc ion b... 52.8 4e-07 gi|21553854|gb|AAM62947.1| zinc finger protein constans-like 8 [ 50.4 2e-06 gi|111378451|gb|ABH09237.1| CONSTANS-like protein [Solanum tuber 50.1 2e-06 gi|3341723|gb|AAC35496.1| CONSTANS-like 1 protein [Raphanus sati 49.7 3e-06 gi|92875402|gb|ABE83395.1| Zinc finger, B-box; CCT [Medicago tru 49.3 4e-06 gi|41323976|gb|AAS00054.1| CONSTANS-like protein CO1 [Populus de 47.0 2e-05 gi|21667471|gb|AAM74062.1|AF490467_1 CONSTANS-like protein [H... 38.1 2e-05 gi|21594050|gb|AAM65968.1| CONSTANS-like B-box zinc finger pr... 46.2 3e-05 gi|18424009|ref|NP_568863.1| transcription factor/ zinc ion b... 46.2 3e-05 gi|9759262|dbj|BAB09583.1| CONSTANS-like B-box zinc finger pr... 46.2 3e-05 gi|15242403|ref|NP_197089.1| COL1 (CONSTANS-LIKE 1); transcri... 45.8 4e-05 gi|116010474|emb|CAL29796.1| CONSTANS-like1 protein [Brassica... 45.4 6e-05 gi|21667485|gb|AAM74069.1|AF490474_1 CONSTANS-like protein [H... 44.7 1e-04 gi|45544887|gb|AAS67379.1| CONSTANS 3 [Lycopersicon esculentum] 44.3 1e-04 gi|90657642|gb|ABD96940.1| hypothetical protein [Cleome spinosa] 43.9 2e-04 gi|21655154|gb|AAL99264.1| CONSTANS-like protein CO5 [Hordeum vu 43.9 2e-04 gi|45544881|gb|AAS67376.1| CONSTANS 1 [Lycopersicon esculentu... 43.9 2e-04 gi|116310719|emb|CAH67516.1| OSIGBa0092E01.11 [Oryza sativa (ind 43.5 2e-04 gi|108859321|emb|CAK26108.1| constans-like 1 [Picea abies] 43.5 2e-04 gi|108859351|emb|CAK26123.1| constans-like 1 [Picea abies] 43.5 2e-04 gi|108859319|emb|CAK26107.1| constans-like 1 [Picea abies] 43.5 2e-04 gi|108859325|emb|CAK26110.1| constans-like 1 [Picea abies] >g... 43.5 2e-04 gi|108859399|emb|CAK26147.1| constans-like 1 [Picea abies] 43.5 2e-04 gi|108859323|emb|CAK26109.1| constans-like 1 [Picea abies] >g... 43.5 2e-04 gi|108859317|emb|CAK26106.1| constans-like 1 [Picea abies] >g... 43.5 2e-04 gi|108859363|emb|CAK26129.1| constans-like 1 [Picea abies] >g... 43.5 2e-04 gi|108859387|emb|CAK26141.1| constans-like 1 [Picea abies] 43.5 2e-04 gi|108859403|emb|CAK26149.1| constans-like 1 [Picea abies] 43.5 2e-04 gi|108859407|emb|CAK26151.1| constans-like 1 [Picea abies] 43.5 2e-04 gi|108859329|emb|CAK26112.1| constans-like 1 [Picea abies] 43.5 2e-04 gi|108859343|emb|CAK26119.1| constans-like 1 [Picea abies] 43.5 2e-04 gi|22854910|gb|AAN09810.1| COL1 protein [Brassica nigra] 43.5 2e-04 gi|22854946|gb|AAN09828.1| COL1 protein [Brassica nigra] 43.5 2e-04 gi|22854942|gb|AAN09826.1| COL1 protein [Brassica nigra] 43.5 2e-04 gi|22854920|gb|AAN09815.1| COL1 protein [Brassica nigra] >gi|... 43.5 2e-04 gi|22854934|gb|AAN09822.1| COL1 protein [Brassica nigra] 43.5 2e-04 gi|22854906|gb|AAN09808.1| COL1 protein [Brassica nigra] >gi|... 43.5 2e-04 gi|22854930|gb|AAN09820.1| COL1 protein [Brassica nigra] >gi|... 43.5 2e-04 gi|22854908|gb|AAN09809.1| COL1 protein [Brassica nigra] 43.5 2e-04 gi|22854972|gb|AAN09841.1| COL1 protein [Brassica nigra] 43.5 2e-04 gi|22854952|gb|AAN09831.1| COL1 protein [Brassica nigra] 43.5 2e-04 gi|22854924|gb|AAN09817.1| COL1 protein [Brassica nigra] 43.5 2e-04 gi|22854966|gb|AAN09838.1| COL1 protein [Brassica nigra] 43.5 2e-04 gi|22854928|gb|AAN09819.1| COL1 protein [Brassica nigra] 43.5 2e-04 gi|22854950|gb|AAN09830.1| COL1 protein [Brassica nigra] 43.5 2e-04 gi|22854982|gb|AAN09846.1| COL1 protein [Brassica nigra] 43.5 2e-04 gi|22854986|gb|AAN09848.1| COL1 protein [Brassica nigra] 43.5 2e-04 gi|11037311|gb|AAG27547.1| constans-like protein [Brassica ni... 43.5 2e-04 gi|115469296|ref|NP_001058247.1| Os06g0654900 [Oryza sativa (... 43.5 2e-04 gi|115447239|ref|NP_001047399.1| Os02g0610500 [Oryza sativa (... 43.5 2e-04 gi|115459216|ref|NP_001053208.1| Os04g0497700 [Oryza sativa (... 43.5 2e-04 gi|22854916|gb|AAN09813.1| COL1 protein [Brassica nigra] 43.1 3e-04 gi|48374872|gb|AAT42130.1| CONSTANS-like protein [Lolium pere... 35.0 3e-04 gi|115444589|ref|NP_001046074.1| Os02g0178100 [Oryza sativa (... 42.7 4e-04 gi|21655158|gb|AAL99267.1| CONSTANS-like protein CO6 [Hordeum... 42.7 4e-04 gi|21655160|gb|AAL99266.1| CONSTANS-like protein CO6 [Hordeum vu 42.7 4e-04 gi|85068129|gb|ABC69350.1| constans-like [Brassica napus] 42.7 4e-04 gi|30984027|gb|AAP42647.1| constans-like protein [Brassica napus 42.7 4e-04 gi|41323978|gb|AAS00055.1| CONSTANS-like protein CO2 [Populus de 42.4 5e-04 gi|106636023|gb|ABF82229.1| constans-like 1 protein [Brassica ju 41.6 8e-04 gi|15232898|ref|NP_186887.1| COL2 (CONSTANS-LIKE 2); transcri... 41.6 8e-04 gi|47606678|gb|AAT36322.1| CONSTANS-like protein [Lolium temulen 35.0 0.001 gi|115473951|ref|NP_001060574.1| Os07g0667300 [Oryza sativa (... 35.8 0.001 gi|23495871|dbj|BAC20080.1| putative zinc-finger protein [Ory... 35.8 0.001 gi|94323375|gb|ABF17844.1| CONSTANS [Solanum tuberosum] 41.2 0.001 gi|61611678|gb|AAX47172.1| CONSTANS-LIKE a [Pisum sativum] 41.2 0.001 gi|78058606|gb|ABB17664.1| Hd1 [Oryza sativa (indica cultivar... 41.2 0.001 gi|115467558|ref|NP_001057378.1| Os06g0275000 [Oryza sativa (... 41.2 0.001 gi|11094207|dbj|BAB17629.1| allele:Hd1 [Oryza sativa (indica cul 40.8 0.001 gi|61657299|emb|CAH55693.1| putative Hd1-like protein [Festuca p 35.0 0.002 gi|115480279|ref|NP_001063733.1| Os09g0527900 [Oryza sativa (... 31.6 0.002 gi|79327899|ref|NP_001031887.1| CO (CONSTANS); zinc ion binding 40.0 0.002 gi|15242402|ref|NP_197088.1| CO (CONSTANS); transcription fac... 40.0 0.002 gi|15238918|ref|NP_199636.1| transcription factor/ zinc ion b... 29.6 0.003 gi|95115497|gb|ABF56054.1| CONSTANS [Solanum demissum] 39.7 0.003 gi|15231491|ref|NP_187422.1| transcription factor/ zinc ion b... 29.6 0.003 gi|26450669|dbj|BAC42445.1| putative zinc finger protein [Arabid 33.1 0.004 gi|15221299|ref|NP_176986.1| transcription factor/ zinc ion b... 33.1 0.004 gi|21667479|gb|AAM74066.1|AF490471_1 CONSTANS-like protein [Hord 37.0 0.004 gi|21667483|gb|AAM74068.1|AF490473_1 CONSTANS-like protein [Hord 37.0 0.004 gi|21667481|gb|AAM74067.1|AF490472_1 CONSTANS-like protein [Hord 37.0 0.004
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 296 Number of extensions: 1 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 400 Length of database: 101054579 Length adjustment: 99 Effective length of query: 301 Effective length of database: 73003028 Effective search space: 2482102952 Effective search space used: 2482102952 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 61 (28.1 bits)
