Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1169024714-28445-89017989553.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,460,989 sequences; 1,533,424,333 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig431 Length=503
Score E Sequences producing significant alignments: (Bits) Value gi|87162727|gb|ABD28522.1| Cupin, RmlC-type [Medicago truncat... 193 3e-49 gi|115489646|ref|NP_001067310.1| Os12g0623600 [Oryza sativa (... 152 8e-37 gi|29244630|gb|AAO73223.1| hypothetical protein OSJNBa0092N01... 138 9e-33 gi|15242218|ref|NP_197016.1| unknown protein [Arabidopsis tha... 130 2e-30 gi|115465789|ref|NP_001056494.1| Os05g0592300 [Oryza sativa (... 125 6e-29 gi|15242505|ref|NP_198805.1| unknown protein [Arabidopsis tha... 123 4e-28 gi|10176982|dbj|BAB10214.1| unnamed protein product [Arabidopsis 123 4e-28 gi|115434966|ref|NP_001042241.1| Os01g0185500 [Oryza sativa (... 118 1e-26 gi|9558428|dbj|BAB03364.1| unknown protein [Oryza sativa (japoni 117 2e-26 gi|108862986|gb|ABA99425.2| expressed protein [Oryza sativa (jap 115 6e-26 gi|58743499|gb|AAW81740.1| Putative Expressed protein [Brassica 106 4e-23 gi|21618020|gb|AAM67070.1| unknown [Arabidopsis thaliana] 105 1e-22 gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thali 105 1e-22 gi|18394617|ref|NP_564055.1| unknown protein [Arabidopsis tha... 105 1e-22 gi|115474673|ref|NP_001060933.1| Os08g0133000 [Oryza sativa (... 103 4e-22 gi|115474679|ref|NP_001060936.1| Os08g0133700 [Oryza sativa (... 101 2e-21 gi|21536850|gb|AAM61182.1| unknown [Arabidopsis thaliana] 100 3e-21 gi|110742706|dbj|BAE99264.1| hypothetical protein [Arabidopsis t 99.8 5e-21 gi|18406030|ref|NP_565980.1| unknown protein [Arabidopsis tha... 99.8 5e-21 gi|15231104|ref|NP_191426.1| unknown protein [Arabidopsis tha... 97.4 2e-20 gi|15451150|gb|AAK96846.1| Unknown protein [Arabidopsis thali... 92.8 6e-19 gi|53791743|dbj|BAD53414.1| hypothetical protein [Oryza sativ... 92.0 1e-18 gi|116308833|emb|CAH65971.1| H0820C10.4 [Oryza sativa (indica... 82.0 1e-15 gi|38345647|emb|CAE04411.2| OSJNBb0040D15.1 [Oryza sativa (japon 82.0 1e-15 gi|115457032|ref|NP_001052116.1| Os04g0151900 [Oryza sativa (... 81.6 1e-15 gi|115454397|ref|NP_001050799.1| Os03g0654700 [Oryza sativa (... 80.9 2e-15 gi|42408585|dbj|BAD09762.1| hypothetical protein [Oryza sativ... 75.9 7e-14 gi|115479689|ref|NP_001063438.1| Os09g0471000 [Oryza sativa (... 73.9 3e-13 gi|47848366|dbj|BAD22226.1| unknown protein [Oryza sativa (japon 73.9 3e-13 gi|115478508|ref|NP_001062849.1| Os09g0316000 [Oryza sativa (... 66.2 6e-11 gi|116058728|emb|CAL54435.1| OSJNBb0040D15.1 [Oryza sativa (ISS) 48.1 2e-05 gi|50252729|dbj|BAD28955.1| hypothetical protein [Oryza sativa ( 34.3 0.24 gi|92889959|gb|ABE90086.1| conserved hypothetical protein [Medic 29.3 7.6 gi|115479185|ref|NP_001063186.1| Os09g0418000 [Oryza sativa (... 28.9 10.0 gi|50252467|dbj|BAD28645.1| putative CBL-interacting protein ... 28.9 10.0 gi|50252468|dbj|BAD28646.1| putative CBL-interacting protein ... 28.9 10.0 gi|115472533|ref|NP_001059865.1| Os07g0534700 [Oryza sativa (... 28.9 10.0
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 16, 2007 5:53 PM Number of letters in database: 101,065,385 Number of sequences in database: 283,397 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283397 Number of Hits to DB: 345 Number of extensions: 8 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 503 Length of database: 101065385 Length adjustment: 105 Effective length of query: 398 Effective length of database: 71308700 Effective search space: 4421139400 Effective search space used: 4421139400 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 63 (28.9 bits)