Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1169018521-31748-178055427693.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,460,989 sequences; 1,533,424,333 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig447 Length=448
Score E Sequences producing significant alignments: (Bits) Value gi|115474665|ref|NP_001060929.1| Os08g0132100 [Oryza sativa (... 32.3 0.67 gi|115474669|ref|NP_001060931.1| Os08g0132600 [Oryza sativa (... 31.6 1.2 gi|50725845|dbj|BAD33375.1| hypothetical protein [Oryza sativa ( 31.6 1.2 gi|115450653|ref|NP_001048927.1| Os03g0141700 [Oryza sativa (... 30.4 2.6 gi|31872087|gb|AAP59843.1| PIN1-like protein [Populus tomentosa] 28.9 7.5 gi|21435938|gb|AAM54033.1|AF515434_1 PIN1-like auxin transpor... 28.9 7.5 gi|115461671|ref|NP_001054435.1| Os05g0108900 [Oryza sativa (... 28.5 9.7 gi|14719321|gb|AAK73139.1|AC079022_12 hypothetical protein [Oryz 28.5 9.7 gi|14719325|gb|AAK73143.1|AC079022_16 hypothetical protein [Oryz 28.5 9.7 gi|2239085|emb|CAB06428.1| anthranilate N-hydroxycinnamoyl/be... 28.5 9.7 gi|50400251|sp|O24645|HCBT1_DIACA Anthranilate N-benzoyltrans... 28.5 9.7
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 16, 2007 5:53 PM Number of letters in database: 101,065,385 Number of sequences in database: 283,397 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283397 Number of Hits to DB: 276 Number of extensions: 1 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 448 Length of database: 101065385 Length adjustment: 103 Effective length of query: 345 Effective length of database: 71875494 Effective search space: 3306272724 Effective search space used: 3306272724 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 62 (28.5 bits)