Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1169018524-31840-127535334735.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,460,989 sequences; 1,533,424,333 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig448 Length=318
Score E Sequences producing significant alignments: (Bits) Value gi|18420455|ref|NP_568416.1| protein binding [Arabidopsis tha... 34.3 0.13 gi|21539493|gb|AAM53299.1| unknown protein [Arabidopsis thaliana 32.7 0.39 gi|20127066|gb|AAM10952.1|AF488596_1 putative bHLH transcription 32.7 0.39 gi|3096922|emb|CAA18832.1| putative protein [Arabidopsis thal... 32.7 0.39 gi|22329164|ref|NP_195179.2| DNA binding / transcription fact... 32.7 0.39 gi|38454176|gb|AAR20782.1| At5g12230 [Arabidopsis thaliana] >... 32.3 0.50 gi|15235334|ref|NP_193752.1| unknown protein [Arabidopsis tha... 32.3 0.50 gi|15239910|ref|NP_196784.1| unknown protein [Arabidopsis tha... 32.3 0.50 gi|15228477|ref|NP_189519.1| unknown protein [Arabidopsis tha... 32.0 0.66 gi|92867060|gb|ABE77483.1| IQ calmodulin-binding region [Medicag 30.8 1.5 gi|117549794|gb|ABK35085.1| EIL1 [Prunus persica] 30.4 1.9 gi|34393324|dbj|BAC83271.1| putative stripe rust resistance p... 30.4 1.9 gi|30697941|ref|NP_201208.2| unknown protein [Arabidopsis tha... 30.0 2.5 gi|111278867|gb|ABH09130.1| beta-conglycinin alpha'-subunit [Gly 29.6 3.3 gi|92890821|gb|ABE90509.1| hypothetical protein MtrDRAFT_AC14... 29.3 4.3 gi|3831447|gb|AAC69930.1| putative extensin [Arabidopsis thal... 29.3 4.3 gi|116061652|emb|CAL52370.1| unnamed protein product [Ostreococc 28.9 5.6 gi|12325042|gb|AAG52469.1|AC010796_8 unknown protein; 76547-7990 28.9 5.6 gi|42563113|ref|NP_177219.2| unknown protein [Arabidopsis thalia 28.9 5.6 gi|30698736|ref|NP_849873.1| unknown protein [Arabidopsis tha... 28.9 5.6 gi|15240607|ref|NP_196838.1| unknown protein [Arabidopsis tha... 28.5 7.3 gi|62733140|gb|AAX95257.1| retrotransposon protein, putative,... 28.5 7.3 gi|15229884|ref|NP_187157.1| DNA binding [Arabidopsis thalian... 28.5 7.3 gi|15242667|ref|NP_198850.1| unknown protein [Arabidopsis tha... 28.5 7.3 gi|8096269|dbj|BAA95789.1| KED [Nicotiana tabacum] 28.5 7.3 gi|92898159|gb|ABE94072.1| Ethylene insensitive 3 [Medicago trun 28.1 9.5 gi|92874056|gb|ABE82374.1| At3g48120 [Medicago truncatula] >g... 28.1 9.5 gi|12323510|gb|AAG51722.1|AC068667_1 hypothetical protein; 381-6 28.1 9.5 gi|15218889|ref|NP_174226.1| nucleotide binding [Arabidopsis ... 28.1 9.5 gi|50346843|ref|YP_053214.1| ycf1 [Nymphaea alba] >gi|7527585... 28.1 9.5 gi|15239764|ref|NP_197449.1| unknown protein [Arabidopsis tha... 28.1 9.5
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 16, 2007 5:53 PM Number of letters in database: 101,065,385 Number of sequences in database: 283,397 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283397 Number of Hits to DB: 126 Number of extensions: 0 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 318 Length of database: 101065385 Length adjustment: 75 Effective length of query: 243 Effective length of database: 79810610 Effective search space: 2474128910 Effective search space used: 2474128910 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 61 (28.1 bits)