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BLASTX 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman 
(1997), "Gapped BLAST and PSI-BLAST: a new generation of 
protein database search programs", Nucleic Acids Res. 25:3389-3402.

RID: 1168930873-22454-128563441012.BLASTQ1


Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
           4,458,890 sequences; 1,532,996,420 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Query=  Contig51
Length=505


Distribution of 77 Blast Hits on the Query Sequence



                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|57471706|gb|AAW50984.1|  ribosomal protein L13a [Triticum aest   186    8e-55 UniGene infoGene info
gi|115455427|ref|NP_001051314.1|  Os03g0756000 [Oryza sativa (...   182    8e-55 Gene info
gi|6093869|sp|O65055|RL13A_PICMA  60S ribosomal protein L13a >...   182    1e-53
gi|15239698|ref|NP_199687.1|  structural constituent of riboso...   182    9e-53 UniGene infoGene info
gi|21326116|gb|AAM47582.1|  putative 60S ribosomal protein [Sorgh   184    1e-52
gi|40748267|gb|AAR89618.1|  60S ribosomal protein L13a [Capsicum    178    1e-51
gi|76573371|gb|ABA46790.1|  60S ribosomal protein L13a-like prote   178    1e-51 UniGene info
gi|19423912|gb|AAL87341.1|  putative 60S ribosomal protein [Arabi   179    2e-51 UniGene info
gi|15230197|ref|NP_189127.1|  structural constituent of riboso...   179    2e-51 UniGene infoGene info
gi|79313149|ref|NP_001030654.1|  structural constituent of riboso   180    4e-51 UniGene infoGene info
gi|15231394|ref|NP_187367.1|  structural constituent of riboso...   180    4e-51 UniGene infoGene info
gi|15235617|ref|NP_193053.1|  structural constituent of riboso...   177    5e-51 UniGene infoGene info
gi|115470251|ref|NP_001058724.1|  Os07g0109500 [Oryza sativa (...   175    2e-50 Gene info
gi|3914535|sp|O49885|RL13A_LUPLU  60S ribosomal protein L13a >...   165    1e-48
gi|62642266|gb|AAX92709.1|  60S ribosomal protein L13a [Picea abi   124    7e-37
gi|32401104|gb|AAP80748.1|  60S ribosomal protein [Kandelia cande   149    5e-36
gi|37718795|gb|AAR01666.1|  putative ribosomal protein L13a [O...   113    2e-32 Gene info
gi|13359437|dbj|BAB33414.1|  putative senescence-associated prote  94.4    2e-19
gi|116060863|emb|CAL57341.1|  60S ribosomal protein L13a (ISS) [O  73.6    4e-19
gi|108711153|gb|ABF98948.1|  60S ribosomal protein L13a-2, put...  68.2    4e-19
gi|115455423|ref|NP_001051312.1|  Os03g0755700 [Oryza sativa (...  68.2    4e-19 Gene info
gi|20473412|gb|AAM22489.1|  36I5.8 [Oryza sativa (japonica cultiv  70.5    3e-12
gi|62732710|gb|AAX94829.1|  retrotransposon protein, putative,...  38.1    1e-05
gi|115485267|ref|NP_001067777.1|  Os11g0425800 [Oryza sativa (...  38.1    1e-05 Gene info
gi|116058185|emb|CAL53374.1|  Mitochondrial/chloroplast riboso...  42.7    7e-04
gi|15218435|ref|NP_177984.1|  EMB1473; structural constituent ...  40.8    0.003 UniGene infoGene info
gi|6049132|gb|AAF02469.1|AF127593_1  putative 60S ribosomal pr...  30.4    0.006
gi|6049134|gb|AAF02470.1|AF127594_1  putative 60S ribosomal prote  30.0    0.007
gi|115439933|ref|NP_001044246.1|  Os01g0749200 [Oryza sativa (...  39.3    0.007 Gene info
gi|6049142|gb|AAF02474.1|AF127598_1  putative 60S ribosomal prote  28.9    0.016
gi|132659|sp|P12629|RK13_SPIOL  50S ribosomal protein L13, chl...  36.2    0.063
gi|1076557|pir||S54157  extensin-like protein - cowpea (fragment)  32.7    0.70 
gi|6049138|gb|AAF02472.1|AF127596_1  putative 60S ribosomal prote  28.5    0.99 
gi|116056379|emb|CAL52668.1|  mRNA cleavage and polyadenylatio...  31.6    1.6  
gi|38605901|emb|CAE04785.3|  OSJNBb0020O11.13 [Oryza sativa (japo  31.6    1.6   Gene info
gi|110737000|dbj|BAF00455.1|  hypothetical protein [Arabidopsis t  30.8    2.7  
gi|15240110|ref|NP_201488.1|  ASL1 [Arabidopsis thaliana] >gi|...  30.8    2.7   UniGene infoGene info
Alignments
>gi|57471706|gb|AAW50984.1| UniGene infoGene info ribosomal protein L13a [Triticum aestivum] Length=206 Score = 186 bits (471), Expect(3) = 8e-55 Identities = 87/93 (93%), Positives = 92/93 (98%), Gaps = 0/93 (0%) Frame = +2 Query 62 GQGICAKKVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICMSGGLVRQKMKYMRFL 241 G G+CAK+VVVDARHHMLGRLASI+AKELLNGQ+VVVVRCEEICMSGGLVRQKMKY+RFL Sbjct 4 GSGVCAKRVVVDARHHMLGRLASIVAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFL 63 Query 242 RKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHK 340 RKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHK Sbjct 64 RKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHK 96 Score = 39.7 bits (91), Expect(3) = 8e-55 Identities = 17/26 (65%), Positives = 20/26 (76%), Gaps = 0/26 (0%) Frame = +3 Query 342 TKRGAATLARLKAYEGIPASYDKMKK 419 T RG A LARLKAYEG+P YD+ K+ Sbjct 97 TARGEAALARLKAYEGVPPPYDRTKR 122 Score = 28.9 bits (63), Expect(3) = 8e-55 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%) Frame = +1 Query 400 PTIR*KRMXIPDALQXFEASXKGHKYXFIGQ 492 P R KRM IPDAL+ GH+Y +GQ Sbjct 116 PYDRTKRMVIPDALKVLRLQ-PGHRYCLLGQ 145 >gi|115455427|ref|NP_001051314.1| Gene info Os03g0756000 [Oryza sativa (japonica cultivar-group)] gi|37718812|gb|AAR01683.1| Gene info putative ribosomal protein L13a [Oryza sativa (japonica cultivar-group)] gi|108711156|gb|ABF98951.1| Gene info 60S ribosomal protein L13a-2, putative, expressed [Oryza sativa (japonica cultivar-group)] gi|113549785|dbj|BAF13228.1| Gene info Os03g0756000 [Oryza sativa (japonica cultivar-group)] Length=206 Score = 182 bits (462), Expect(3) = 8e-55 Identities = 84/93 (90%), Positives = 91/93 (97%), Gaps = 0/93 (0%) Frame = +2 Query 62 GQGICAKKVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICMSGGLVRQKMKYMRFL 241 G G+CA +VVVDARHHMLGRLASI+AKELLNGQ+VVVVRCEEICMSGGLVRQKMKY+RFL Sbjct 4 GSGVCAPRVVVDARHHMLGRLASIIAKELLNGQRVVVVRCEEICMSGGLVRQKMKYLRFL 63 Query 242 RKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHK 340 RKRMNTKPSHGPIHFR+PAKILWRT+RGMIPHK Sbjct 64 RKRMNTKPSHGPIHFRSPAKILWRTVRGMIPHK 96 Score = 42.0 bits (97), Expect(3) = 8e-55 Identities = 18/26 (69%), Positives = 21/26 (80%), Gaps = 0/26 (0%) Frame = +3 Query 342 TKRGAATLARLKAYEGIPASYDKMKK 419 TKRG A LARLKAYEG+P YD+ K+ Sbjct 97 TKRGEAALARLKAYEGVPPPYDRTKR 122 Score = 30.0 bits (66), Expect(3) = 8e-55 Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 1/31 (3%) Frame = +1 Query 400 PTIR*KRMXIPDALQXFEASXKGHKYXFIGQ 492 P R KRM IPDAL+ GHKY +GQ Sbjct 116 PYDRTKRMVIPDALKVLRLQ-PGHKYCLLGQ 145 >gi|6093869|sp|O65055|RL13A_PICMA 60S ribosomal protein L13a gi|2982259|gb|AAC32117.1| probable 60s ribosomal protein L13a [Picea mariana] Length=206 Score = 182 bits (463), Expect(3) = 1e-53 Identities = 86/93 (92%), Positives = 92/93 (98%), Gaps = 0/93 (0%) Frame = +2 Query 62 GQGICAKKVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICMSGGLVRQKMKYMRFL 241 G GICAK+VVVDARHHMLGRLASILAKELL+GQ+VVVVRCEEICMSGGLVRQKMKY+RFL Sbjct 4 GSGICAKEVVVDARHHMLGRLASILAKELLHGQRVVVVRCEEICMSGGLVRQKMKYLRFL 63 Query 242 RKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHK 340 RKRMNTKPSHGPIHFRAP++ILWRTIRGMIPHK Sbjct 64 RKRMNTKPSHGPIHFRAPSRILWRTIRGMIPHK 96 Score = 38.9 bits (89), Expect(3) = 1e-53 Identities = 16/26 (61%), Positives = 21/26 (80%), Gaps = 0/26 (0%) Frame = +3 Query 342 TKRGAATLARLKAYEGIPASYDKMKK 419 TKRGAA LA L+A+EG+P YD+ K+ Sbjct 97 TKRGAAALATLRAFEGVPPPYDRKKR 122 Score = 28.5 bits (62), Expect(3) = 1e-53 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%) Frame = +1 Query 400 PTIR*KRMXIPDALQXFEASXKGHKYXFIGQ 492 P R KRM IPDAL+ GHKY +G+ Sbjct 116 PYDRKKRMVIPDALKVLRLQ-PGHKYCLLGR 145 >gi|15239698|ref|NP_199687.1| UniGene infoGene info structural constituent of ribosome [Arabidopsis thaliana] gi|17865558|sp|Q9FKC0|R13A4_ARATH Gene info 60S ribosomal protein L13a-4 gi|9758875|dbj|BAB09429.1| Gene info 60S ribosomal protein L13a [Arabidopsis thaliana] gi|19699305|gb|AAL91263.1| UniGene infoGene info AT5g48760/K24G6_9 [Arabidopsis thaliana] gi|21593767|gb|AAM65734.1| UniGene infoGene info 60S ribosomal protein L13a [Arabidopsis thaliana] gi|21689627|gb|AAM67435.1| UniGene infoGene info At5g48760/K24G6_9 [Arabidopsis thaliana] Length=206 Score = 182 bits (461), Expect(2) = 9e-53 Identities = 84/93 (90%), Positives = 90/93 (96%), Gaps = 0/93 (0%) Frame = +2 Query 62 GQGICAKKVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICMSGGLVRQKMKYMRFL 241 G GIC+K+VVVDARHHMLGRLASI AKELLNGQKVV+VRCEEIC+SGGLVRQKMKYMRFL Sbjct 4 GSGICSKRVVVDARHHMLGRLASITAKELLNGQKVVIVRCEEICLSGGLVRQKMKYMRFL 63 Query 242 RKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHK 340 RKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHK Sbjct 64 RKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHK 96 Score = 44.7 bits (104), Expect(2) = 9e-53 Identities = 19/26 (73%), Positives = 22/26 (84%), Gaps = 0/26 (0%) Frame = +3 Query 342 TKRGAATLARLKAYEGIPASYDKMKK 419 TKRGAA LARLK YEG+P YDK+K+ Sbjct 97 TKRGAAALARLKVYEGVPTPYDKIKR 122 >gi|21326116|gb|AAM47582.1| putative 60S ribosomal protein [Sorghum bicolor] Length=206 Score = 184 bits (468), Expect(2) = 1e-52 Identities = 85/93 (91%), Positives = 92/93 (98%), Gaps = 0/93 (0%) Frame = +2 Query 62 GQGICAKKVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICMSGGLVRQKMKYMRFL 241 G G+CAK++VVDARHHMLGRL+SI+AKELLNGQKVVVVRCEEICMSGGLVRQKMKY+RFL Sbjct 4 GSGVCAKRIVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICMSGGLVRQKMKYLRFL 63 Query 242 RKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHK 340 RKRMNTKPSHGPIHFRAP+KILWRTIRGMIPHK Sbjct 64 RKRMNTKPSHGPIHFRAPSKILWRTIRGMIPHK 96 Score = 41.6 bits (96), Expect(2) = 1e-52 Identities = 18/26 (69%), Positives = 20/26 (76%), Gaps = 0/26 (0%) Frame = +3 Query 342 TKRGAATLARLKAYEGIPASYDKMKK 419 TKRG A LARLK YEG+P YDK K+ Sbjct 97 TKRGEAALARLKTYEGVPPPYDKTKR 122 >gi|40748267|gb|AAR89618.1| 60S ribosomal protein L13a [Capsicum annuum] Length=220 Score = 178 bits (452), Expect(2) = 1e-51 Identities = 83/93 (89%), Positives = 91/93 (97%), Gaps = 0/93 (0%) Frame = +2 Query 62 GQGICAKKVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICMSGGLVRQKMKYMRFL 241 G GI A+++VVDARHHMLGRL+SILAKELLNGQ+VVVVRCEEIC+SGGLVRQKMKY+RFL Sbjct 4 GSGISARRIVVDARHHMLGRLSSILAKELLNGQRVVVVRCEEICLSGGLVRQKMKYLRFL 63 Query 242 RKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHK 340 RKRMNTKPSHGPIHFRAP+KILWRTIRGMIPHK Sbjct 64 RKRMNTKPSHGPIHFRAPSKILWRTIRGMIPHK 96 Score = 44.3 bits (103), Expect(2) = 1e-51 Identities = 19/26 (73%), Positives = 22/26 (84%), Gaps = 0/26 (0%) Frame = +3 Query 342 TKRGAATLARLKAYEGIPASYDKMKK 419 TKRGAA LARLK YEG+P YDK+K+ Sbjct 97 TKRGAAALARLKVYEGVPPPYDKIKR 122 >gi|76573371|gb|ABA46790.1| UniGene info 60S ribosomal protein L13a-like protein [Solanum tuberosum] Length=206 Score = 178 bits (452), Expect(2) = 1e-51 Identities = 83/93 (89%), Positives = 91/93 (97%), Gaps = 0/93 (0%) Frame = +2 Query 62 GQGICAKKVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICMSGGLVRQKMKYMRFL 241 G GI A+++VVDARHHMLGRL+SILAKELLNGQ+VVVVRCEEIC+SGGLVRQKMKY+RFL Sbjct 4 GSGISARRIVVDARHHMLGRLSSILAKELLNGQRVVVVRCEEICLSGGLVRQKMKYLRFL 63 Query 242 RKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHK 340 RKRMNTKPSHGPIHFRAP+KILWRTIRGMIPHK Sbjct 64 RKRMNTKPSHGPIHFRAPSKILWRTIRGMIPHK 96 Score = 44.3 bits (103), Expect(2) = 1e-51 Identities = 19/26 (73%), Positives = 22/26 (84%), Gaps = 0/26 (0%) Frame = +3 Query 342 TKRGAATLARLKAYEGIPASYDKMKK 419 TKRGAA LARLK YEG+P YDK+K+ Sbjct 97 TKRGAAALARLKVYEGVPPPYDKIKR 122 >gi|19423912|gb|AAL87341.1| UniGene info putative 60S ribosomal protein [Arabidopsis thaliana] Length=206 Score = 179 bits (455), Expect(2) = 2e-51 Identities = 83/93 (89%), Positives = 89/93 (95%), Gaps = 0/93 (0%) Frame = +2 Query 62 GQGICAKKVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICMSGGLVRQKMKYMRFL 241 G GIC+K+VVVDARHHM GRLASI+AKELLNGQ VVVVRCEEIC+SGGLVRQKMKYMRFL Sbjct 4 GSGICSKRVVVDARHHMCGRLASIIAKELLNGQSVVVVRCEEICLSGGLVRQKMKYMRFL 63 Query 242 RKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHK 340 RKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHK Sbjct 64 RKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHK 96 Score = 42.7 bits (99), Expect(2) = 2e-51 Identities = 18/26 (69%), Positives = 22/26 (84%), Gaps = 0/26 (0%) Frame = +3 Query 342 TKRGAATLARLKAYEGIPASYDKMKK 419 TKRGAA LARLK +EG+P YDK+K+ Sbjct 97 TKRGAAALARLKVFEGVPPPYDKVKR 122 >gi|15230197|ref|NP_189127.1| UniGene infoGene info structural constituent of ribosome [Arabidopsis thaliana] gi|17865564|sp|Q9LRX8|R13A2_ARATH Gene info 60S ribosomal protein L13a-2 gi|11994665|dbj|BAB02893.1| Gene info 60S ribosomal protein L13A-like [Arabidopsis thaliana] gi|23297306|gb|AAN12937.1| UniGene infoGene info putative 60S ribosomal protein [Arabidopsis thaliana] Length=206 Score = 179 bits (455), Expect(2) = 2e-51 Identities = 83/93 (89%), Positives = 89/93 (95%), Gaps = 0/93 (0%) Frame = +2 Query 62 GQGICAKKVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICMSGGLVRQKMKYMRFL 241 G GIC+K+VVVDARHHM GRLASI+AKELLNGQ VVVVRCEEIC+SGGLVRQKMKYMRFL Sbjct 4 GSGICSKRVVVDARHHMCGRLASIIAKELLNGQSVVVVRCEEICLSGGLVRQKMKYMRFL 63 Query 242 RKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHK 340 RKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHK Sbjct 64 RKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHK 96 Score = 42.7 bits (99), Expect(2) = 2e-51 Identities = 18/26 (69%), Positives = 22/26 (84%), Gaps = 0/26 (0%) Frame = +3 Query 342 TKRGAATLARLKAYEGIPASYDKMKK 419 TKRGAA LARLK +EG+P YDK+K+ Sbjct 97 TKRGAAALARLKVFEGVPPPYDKVKR 122 >gi|79313149|ref|NP_001030654.1| UniGene infoGene info structural constituent of ribosome [Arabidopsis thaliana] Length=207 Score = 180 bits (457), Expect(2) = 4e-51 Identities = 82/93 (88%), Positives = 90/93 (96%), Gaps = 0/93 (0%) Frame = +2 Query 62 GQGICAKKVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICMSGGLVRQKMKYMRFL 241 G GICAK+VVVDARHHMLGRLAS++AK+LLNGQ +VVVRCEEIC+SGGLVRQKMKYMRFL Sbjct 4 GSGICAKRVVVDARHHMLGRLASVVAKDLLNGQNIVVVRCEEICLSGGLVRQKMKYMRFL 63 Query 242 RKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHK 340 RKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHK Sbjct 64 RKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHK 96 Score = 40.8 bits (94), Expect(2) = 4e-51 Identities = 17/26 (65%), Positives = 21/26 (80%), Gaps = 0/26 (0%) Frame = +3 Query 342 TKRGAATLARLKAYEGIPASYDKMKK 419 TKRGA LARLK +EG+P YDK+K+ Sbjct 97 TKRGANALARLKVFEGVPTPYDKIKR 122 >gi|15231394|ref|NP_187367.1| UniGene infoGene info structural constituent of ribosome [Arabidopsis thaliana] gi|17865571|sp|Q9SFU1|R13A1_ARATH Gene info 60S ribosomal protein L13a-1 gi|6642654|gb|AAF20235.1|AC012395_22 Gene info putative 60S ribosomal protein L13A [Arabidopsis thaliana] gi|11762230|gb|AAG40393.1|AF325041_1 UniGene infoGene info AT3g07110 [Arabidopsis thaliana] gi|15982887|gb|AAL09790.1| UniGene infoGene info AT3g07110/T1B9_24 [Arabidopsis thaliana] gi|17065434|gb|AAL32871.1| UniGene infoGene info putative 60S ribosomal protein L13A [Arabidopsis thaliana] gi|21387009|gb|AAM47908.1| UniGene infoGene info putative 60S ribosomal protein L13A [Arabidopsis thaliana] Length=206 Score = 180 bits (457), Expect(2) = 4e-51 Identities = 82/93 (88%), Positives = 90/93 (96%), Gaps = 0/93 (0%) Frame = +2 Query 62 GQGICAKKVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICMSGGLVRQKMKYMRFL 241 G GICAK+VVVDARHHMLGRLAS++AK+LLNGQ +VVVRCEEIC+SGGLVRQKMKYMRFL Sbjct 4 GSGICAKRVVVDARHHMLGRLASVVAKDLLNGQNIVVVRCEEICLSGGLVRQKMKYMRFL 63 Query 242 RKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHK 340 RKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHK Sbjct 64 RKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHK 96 Score = 40.8 bits (94), Expect(2) = 4e-51 Identities = 17/26 (65%), Positives = 21/26 (80%), Gaps = 0/26 (0%) Frame = +3 Query 342 TKRGAATLARLKAYEGIPASYDKMKK 419 TKRGA LARLK +EG+P YDK+K+ Sbjct 97 TKRGANALARLKVFEGVPTPYDKIKR 122 >gi|15235617|ref|NP_193053.1| UniGene infoGene info structural constituent of ribosome [Arabidopsis thaliana] gi|17865573|sp|Q9SVR0|R13A3_ARATH Gene info 60S ribosomal protein L13a-3 gi|4753651|emb|CAB41927.1| Gene info ribosomal protein L13a like protein [Arabidopsis thaliana] gi|7268019|emb|CAB78359.1| Gene info ribosomal protein L13a like protein [Arabidopsis thaliana] gi|15529278|gb|AAK97733.1| UniGene infoGene info AT4g13170/F17N18_60 [Arabidopsis thaliana] gi|16974411|gb|AAL31131.1| UniGene infoGene info AT4g13170/F17N18_60 [Arabidopsis thaliana] Length=206 Score = 177 bits (450), Expect(2) = 5e-51 Identities = 83/93 (89%), Positives = 88/93 (94%), Gaps = 0/93 (0%) Frame = +2 Query 62 GQGICAKKVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICMSGGLVRQKMKYMRFL 241 G GICAK+VVVD RHHMLGRLAS AKELLNGQ+VVVVRCEEIC+SGGLVRQKMKYMRFL Sbjct 4 GSGICAKRVVVDGRHHMLGRLASNTAKELLNGQEVVVVRCEEICLSGGLVRQKMKYMRFL 63 Query 242 RKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHK 340 RKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHK Sbjct 64 RKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHK 96 Score = 43.1 bits (100), Expect(2) = 5e-51 Identities = 19/26 (73%), Positives = 22/26 (84%), Gaps = 0/26 (0%) Frame = +3 Query 342 TKRGAATLARLKAYEGIPASYDKMKK 419 TKRGAA LARLK +EGIP YDK+K+ Sbjct 97 TKRGAAALARLKVFEGIPPPYDKIKR 122 >gi|115470251|ref|NP_001058724.1| Gene info Os07g0109500 [Oryza sativa (japonica cultivar-group)] gi|33146452|dbj|BAC79560.1| Gene info putative 60S ribosomal protein [Oryza sativa (japonica cultivar-group)] gi|50510030|dbj|BAD30642.1| Gene info putative 60S ribosomal protein [Oryza sativa (japonica cultivar-group)] gi|113610260|dbj|BAF20638.1| Gene info Os07g0109500 [Oryza sativa (japonica cultivar-group)] Length=206 Score = 175 bits (443), Expect(3) = 2e-50 Identities = 78/93 (83%), Positives = 90/93 (96%), Gaps = 0/93 (0%) Frame = +2 Query 62 GQGICAKKVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICMSGGLVRQKMKYMRFL 241 G G+C ++VVVDARHHMLGRLAS++AKELLNGQ+VVVVRCEE+C+SGGLVRQKMKY+RFL Sbjct 4 GSGLCTRRVVVDARHHMLGRLASLVAKELLNGQRVVVVRCEEMCISGGLVRQKMKYLRFL 63 Query 242 RKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHK 340 RKRMNTKPSHGPIHFRAP++I WRT+RGMIPHK Sbjct 64 RKRMNTKPSHGPIHFRAPSRIFWRTVRGMIPHK 96 Score = 35.0 bits (79), Expect(3) = 2e-50 Identities = 14/26 (53%), Positives = 19/26 (73%), Gaps = 0/26 (0%) Frame = +3 Query 342 TKRGAATLARLKAYEGIPASYDKMKK 419 T RG A LA LKA++G+P YD+ K+ Sbjct 97 TPRGEAALANLKAFDGVPPPYDRTKR 122 Score = 29.6 bits (65), Expect(3) = 2e-50 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%) Frame = +1 Query 400 PTIR*KRMXIPDALQXFEASXKGHKYXFIGQ 492 P R KRM +PDAL+ GHKY +GQ Sbjct 116 PYDRTKRMVVPDALKVLRLQ-PGHKYCLLGQ 145 >gi|3914535|sp|O49885|RL13A_LUPLU 60S ribosomal protein L13a gi|2791948|emb|CAA11283.1| ribosomal protein L13a [Lupinus luteus] Length=205 Score = 165 bits (418), Expect(3) = 1e-48 Identities = 80/93 (86%), Positives = 87/93 (93%), Gaps = 1/93 (1%) Frame = +2 Query 62 GQGICAKKVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICMSGGLVRQKMKYMRFL 241 G GI AK+VVVDARHHMLGRLASI+AKELLNGQKVV+VR EEIC+SGGLVRQKMKY+RFL Sbjct 4 GSGIAAKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRSEEICISGGLVRQKMKYLRFL 63 Query 242 RKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHK 340 RKRMNTKPSHGPIH AP+KI WRT+RGMIPHK Sbjct 64 RKRMNTKPSHGPIHC-APSKIFWRTVRGMIPHK 95 Score = 38.5 bits (88), Expect(3) = 1e-48 Identities = 17/26 (65%), Positives = 19/26 (73%), Gaps = 0/26 (0%) Frame = +3 Query 342 TKRGAATLARLKAYEGIPASYDKMKK 419 TKRG LARLK YEGIP +DK K+ Sbjct 96 TKRGEHALARLKVYEGIPPPFDKQKR 121 Score = 29.6 bits (65), Expect(3) = 1e-48 Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 1/26 (3%) Frame = +1 Query 415 KRMXIPDALQXFEASXKGHKYXFIGQ 492 KR+ +PDAL+ KGHKY +GQ Sbjct 120 KRLVVPDALKVLRLQ-KGHKYCLLGQ 144 >gi|62642266|gb|AAX92709.1| 60S ribosomal protein L13a [Picea abies] Length=170 Score = 124 bits (311), Expect(3) = 7e-37 Identities = 56/60 (93%), Positives = 60/60 (100%), Gaps = 0/60 (0%) Frame = +2 Query 161 KVVVVRCEEICMSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHK 340 +VVVVRCEEICMSGGLVRQKMKY+RFLRKRMNTKPSHGPIHFRAP++ILWRTIRGMIPHK Sbjct 1 RVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSRILWRTIRGMIPHK 60 Score = 41.2 bits (95), Expect(3) = 7e-37 Identities = 17/26 (65%), Positives = 22/26 (84%), Gaps = 0/26 (0%) Frame = +3 Query 342 TKRGAATLARLKAYEGIPASYDKMKK 419 TKRGAA LARL+A+EG+P YD+ K+ Sbjct 61 TKRGAAALARLRAFEGVPPPYDRKKR 86 Score = 28.5 bits (62), Expect(3) = 7e-37 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%) Frame = +1 Query 400 PTIR*KRMXIPDALQXFEASXKGHKYXFIGQ 492 P R KRM IPDAL+ GHKY +G+ Sbjct 80 PYDRKKRMVIPDALKVLRLQ-PGHKYCLLGR 109 >gi|32401104|gb|AAP80748.1| 60S ribosomal protein [Kandelia candel] Length=79 Score = 149 bits (376), Expect = 5e-36 Identities = 72/77 (93%), Positives = 76/77 (98%), Gaps = 0/77 (0%) Frame = +2 Query 77 AKKVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICMSGGLVRQKMKYMRFLRKRMN 256 AK VVVDARHHMLGRLASI+AKELLNGQKVVVVRCEEIC+SGGLVRQKMKY+RFLRKRMN Sbjct 2 AKVVVVDARHHMLGRLASIIAKELLNGQKVVVVRCEEICLSGGLVRQKMKYLRFLRKRMN 61 Query 257 TKPSHGPIHFRAPAKIL 307 TKPSHGPIHFRAP+KIL Sbjct 62 TKPSHGPIHFRAPSKIL 78 >gi|37718795|gb|AAR01666.1| Gene info putative ribosomal protein L13a [Oryza sativa (japonica cultivar-group)] Length=172 Score = 113 bits (282), Expect(3) = 2e-32 Identities = 57/93 (61%), Positives = 64/93 (68%), Gaps = 26/93 (27%) Frame = +2 Query 62 GQGICAKKVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICMSGGLVRQKMKYMRFL 241 G G+CA +VVVDARHHML RLASI+AKELLNG++VV Sbjct 4 GSGVCAPRVVVDARHHMLSRLASIIAKELLNGKRVV------------------------ 39 Query 242 RKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHK 340 RMNTKPSHGPIHFR+PAKILWRT+RGMIPHK Sbjct 40 --RMNTKPSHGPIHFRSPAKILWRTVRGMIPHK 70 Score = 35.4 bits (80), Expect(3) = 2e-32 Identities = 16/26 (61%), Positives = 19/26 (73%), Gaps = 0/26 (0%) Frame = +3 Query 342 TKRGAATLARLKAYEGIPASYDKMKK 419 TKRG A LARLKAYE + YD+ K+ Sbjct 71 TKRGEAALARLKAYEVVTPPYDRTKR 96 Score = 30.0 bits (66), Expect(3) = 2e-32 Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 1/31 (3%) Frame = +1 Query 400 PTIR*KRMXIPDALQXFEASXKGHKYXFIGQ 492 P R KRM IPDAL+ GHKY +GQ Sbjct 90 PYDRTKRMVIPDALKVLRLQ-PGHKYCLLGQ 119 >gi|13359437|dbj|BAB33414.1| putative senescence-associated protein [Pisum sativum] Length=255 Score = 94.4 bits (233), Expect = 2e-19 Identities = 46/59 (77%), Positives = 52/59 (88%), Gaps = 0/59 (0%) Frame = +2 Query 110 MLGRLASILAKELLNGQKVVVVRCEEICMSGGLVRQKMKYMRFLRKRMNTKPSHGPIHF 286 MLGRLASI+AKEL ++ +VRCEEIC+SGGL RQKMKYMRFLR+RMNTKPSHGPI F Sbjct 1 MLGRLASIVAKELSMVRRSFLVRCEEICISGGLGRQKMKYMRFLRRRMNTKPSHGPITF 59 >gi|116060863|emb|CAL57341.1| 60S ribosomal protein L13a (ISS) [Ostreococcus tauri] Length=159 Score = 73.6 bits (179), Expect(2) = 4e-19 Identities = 29/49 (59%), Positives = 40/49 (81%), Gaps = 0/49 (0%) Frame = +2 Query 194 MSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHK 340 MSGG+VR++M + R+ KRMNT P GP H+ +P++ILW+T+RGMIPHK Sbjct 1 MSGGMVRRRMAHDRYKNKRMNTNPKRGPYHYTSPSRILWKTVRGMIPHK 49 Score = 40.4 bits (93), Expect(2) = 4e-19 Identities = 18/26 (69%), Positives = 20/26 (76%), Gaps = 0/26 (0%) Frame = +3 Query 342 TKRGAATLARLKAYEGIPASYDKMKK 419 T RGAA R KAYEGIPA YDK+K+ Sbjct 50 TVRGAAAFERFKAYEGIPAPYDKVKR 75 >gi|108711153|gb|ABF98948.1| 60S ribosomal protein L13a-2, putative [Oryza sativa (japonica cultivar-group)] Length=122 Score = 68.2 bits (165), Expect(3) = 4e-19 Identities = 28/30 (93%), Positives = 30/30 (100%), Gaps = 0/30 (0%) Frame = +2 Query 251 MNTKPSHGPIHFRAPAKILWRTIRGMIPHK 340 MNTKPSHGPIHFR+PAKILWRT+RGMIPHK Sbjct 1 MNTKPSHGPIHFRSPAKILWRTVRGMIPHK 30 Score = 35.4 bits (80), Expect(3) = 4e-19 Identities = 16/26 (61%), Positives = 19/26 (73%), Gaps = 0/26 (0%) Frame = +3 Query 342 TKRGAATLARLKAYEGIPASYDKMKK 419 TKRG A LARLKAYE + YD+ K+ Sbjct 31 TKRGEAALARLKAYEVVTPPYDRTKR 56 Score = 30.0 bits (66), Expect(3) = 4e-19 Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 1/31 (3%) Frame = +1 Query 400 PTIR*KRMXIPDALQXFEASXKGHKYXFIGQ 492 P R KRM IPDAL+ GHKY +GQ Sbjct 50 PYDRTKRMVIPDALKVLRLQ-PGHKYCLLGQ 79 >gi|115455423|ref|NP_001051312.1| Gene info Os03g0755700 [Oryza sativa (japonica cultivar-group)] gi|113549783|dbj|BAF13226.1| Gene info Os03g0755700 [Oryza sativa (japonica cultivar-group)] Length=96 Score = 68.2 bits (165), Expect(3) = 4e-19 Identities = 28/30 (93%), Positives = 30/30 (100%), Gaps = 0/30 (0%) Frame = +2 Query 251 MNTKPSHGPIHFRAPAKILWRTIRGMIPHK 340 MNTKPSHGPIHFR+PAKILWRT+RGMIPHK Sbjct 1 MNTKPSHGPIHFRSPAKILWRTVRGMIPHK 30 Score = 35.4 bits (80), Expect(3) = 4e-19 Identities = 16/26 (61%), Positives = 19/26 (73%), Gaps = 0/26 (0%) Frame = +3 Query 342 TKRGAATLARLKAYEGIPASYDKMKK 419 TKRG A LARLKAYE + YD+ K+ Sbjct 31 TKRGEAALARLKAYEVVTPPYDRTKR 56 Score = 30.0 bits (66), Expect(3) = 4e-19 Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 1/31 (3%) Frame = +1 Query 400 PTIR*KRMXIPDALQXFEASXKGHKYXFIGQ 492 P R KRM IPDAL+ GHKY +GQ Sbjct 50 PYDRTKRMVIPDALKVLRLQ-PGHKYCLLGQ 79 >gi|20473412|gb|AAM22489.1| 36I5.8 [Oryza sativa (japonica cultivar-group)] Length=43 Score = 70.5 bits (171), Expect = 3e-12 Identities = 32/40 (80%), Positives = 37/40 (92%), Gaps = 0/40 (0%) Frame = +2 Query 62 GQGICAKKVVVDARHHMLGRLASILAKELLNGQKVVVVRC 181 G G+CA +VVVDARHHML RLASI+AKELLNG++VVVVRC Sbjct 4 GSGVCAPRVVVDARHHMLSRLASIIAKELLNGKRVVVVRC 43 >gi|62732710|gb|AAX94829.1| retrotransposon protein, putative, unclassified [Oryza sativa (japonica cultivar-group)] gi|62734473|gb|AAX96582.1| retrotransposon protein, putative, unclassified [Oryza sativa (japonica cultivar-group)] gi|77550395|gb|ABA93192.1| retrotransposon protein, putative, unclassified [Oryza sativa (japonica cultivar-group)] Length=512 Score = 38.1 bits (87), Expect(2) = 1e-05 Identities = 16/24 (66%), Positives = 19/24 (79%), Gaps = 0/24 (0%) Frame = +3 Query 348 RGAATLARLKAYEGIPASYDKMKK 419 RG A LARLKAYEG+P YD+ K+ Sbjct 9 RGEAALARLKAYEGVPPPYDRTKR 32 Score = 30.0 bits (66), Expect(2) = 1e-05 Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 1/31 (3%) Frame = +1 Query 400 PTIR*KRMXIPDALQXFEASXKGHKYXFIGQ 492 P R KRM IPDAL+ GHKY +GQ Sbjct 26 PYDRTKRMVIPDALKVLRLQ-PGHKYCLLGQ 55 >gi|115485267|ref|NP_001067777.1| Gene info Os11g0425800 [Oryza sativa (japonica cultivar-group)] gi|113644999|dbj|BAF28140.1| Gene info Os11g0425800 [Oryza sativa (japonica cultivar-group)] Length=70 Score = 38.1 bits (87), Expect(2) = 1e-05 Identities = 16/24 (66%), Positives = 19/24 (79%), Gaps = 0/24 (0%) Frame = +3 Query 348 RGAATLARLKAYEGIPASYDKMKK 419 RG A LARLKAYEG+P YD+ K+ Sbjct 9 RGEAALARLKAYEGVPPPYDRTKR 32 Score = 30.0 bits (66), Expect(2) = 1e-05 Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 1/31 (3%) Frame = +1 Query 400 PTIR*KRMXIPDALQXFEASXKGHKYXFIGQ 492 P R KRM IPDAL+ GHKY +GQ Sbjct 26 PYDRTKRMVIPDALKVLRLQ-PGHKYCLLGQ 55 >gi|116058185|emb|CAL53374.1| Mitochondrial/chloroplast ribosomal protein L13 (ISS) [Ostreococcus tauri] Length=201 Score = 42.7 bits (99), Expect = 7e-04 Identities = 27/97 (27%), Positives = 51/97 (52%), Gaps = 14/97 (14%) Frame = +2 Query 86 VVVDARHHMLGRLASILAKELLNGQK------------VVVVRCEEICMSGGLVRQKMKY 229 VV+DA LGR+++ AK L G V+V+ +++ ++G +QKM Y Sbjct 55 VVIDAAGMRLGRMSTAAAKYLRGGNSGSYTPAFNMGVNVIVINADKVEVTGQKAQQKMYY 114 Query 230 MRFLRKRMNT--KPSHGPIHFRAPAKILWRTIRGMIP 334 +R + + + ++ + R PA+++ + IRGM+P Sbjct 115 KLGVRGKPGSMKEETYESLFARQPARVVEKAIRGMLP 151 >gi|15218435|ref|NP_177984.1| UniGene infoGene info EMB1473; structural constituent of ribosome [Arabidopsis thaliana] gi|75314103|sp|Q9SYL9|RK13_ARATH Gene info 50S ribosomal protein L13, chloroplast precursor (CL13) gi|4836870|gb|AAD30573.1|AC007260_4 Gene info 50S Ribosomal protein L13 [Arabidopsis thaliana] gi|13878111|gb|AAK44133.1|AF370318_1 UniGene infoGene info putative ribosomal protein L13 [Arabidopsis thaliana] gi|7572938|emb|CAA60775.1| Gene info ribosomal protein L13 [Arabidopsis thaliana] gi|17104781|gb|AAL34279.1| UniGene infoGene info putative ribosomal protein L13 [Arabidopsis thaliana] Length=241 Score = 40.8 bits (94), Expect = 0.003 Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 12/94 (12%) Frame = +2 Query 89 VVDARHHMLGRLASILAKELLN------------GQKVVVVRCEEICMSGGLVRQKMKYM 232 VVDA +LGRLAS +A + G V+VV E++ +SG QK+ Sbjct 107 VVDATDKILGRLASTIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQKLYRR 166 Query 233 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIP 334 R T + + R P +I+ +RGM+P Sbjct 167 HSGRPGGMTVETFDQLQQRIPERIVEHAVRGMLP 200 >gi|6049132|gb|AAF02469.1|AF127593_1 putative 60S ribosomal protein L13a [Picea abies] gi|6049140|gb|AAF02473.1|AF127597_1 putative 60S ribosomal protein L13a [Picea mariana] Length=105 Score = 30.4 bits (67), Expect(2) = 0.006 Identities = 12/21 (57%), Positives = 16/21 (76%), Gaps = 0/21 (0%) Frame = +3 Query 357 ATLARLKAYEGIPASYDKMKK 419 A LARL A+EG+P YD+ K+ Sbjct 1 AALARLXAFEGVPPPYDRKKR 21 Score = 28.5 bits (62), Expect(2) = 0.006 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%) Frame = +1 Query 400 PTIR*KRMXIPDALQXFEASXKGHKYXFIGQ 492 P R KRM IPDAL+ GHKY +G+ Sbjct 15 PYDRKKRMVIPDALKVLRLQ-PGHKYCLLGR 44 >gi|6049134|gb|AAF02470.1|AF127594_1 putative 60S ribosomal protein L13a [Picea abies] Length=89 Score = 30.0 bits (66), Expect(2) = 0.007 Identities = 11/19 (57%), Positives = 16/19 (84%), Gaps = 0/19 (0%) Frame = +3 Query 363 LARLKAYEGIPASYDKMKK 419 LARL+A+EG+P YD+ K+ Sbjct 2 LARLRAFEGVPPPYDRKKR 20 Score = 28.5 bits (62), Expect(2) = 0.007 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%) Frame = +1 Query 400 PTIR*KRMXIPDALQXFEASXKGHKYXFIGQ 492 P R KRM IPDAL+ GHKY +G+ Sbjct 14 PYDRKKRMVIPDALKVLRLQ-PGHKYCLLGR 43 >gi|115439933|ref|NP_001044246.1| Gene info Os01g0749200 [Oryza sativa (japonica cultivar-group)] gi|14209550|dbj|BAB56046.1| Gene info putative ribosomal protein L13 precursor [Oryza sativa (japonica cultivar-group)] gi|113533777|dbj|BAF06160.1| Gene info Os01g0749200 [Oryza sativa (japonica cultivar-group)] Length=233 Score = 39.3 bits (90), Expect = 0.007 Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 12/94 (12%) Frame = +2 Query 89 VVDARHHMLGRLASILAKELLN------------GQKVVVVRCEEICMSGGLVRQKMKYM 232 VVDA +LGRLAS +A + G VVVV E++ +SG QK+ Sbjct 98 VVDATDKILGRLASTIAVHIRGKNEATYTPSVDMGAFVVVVNAEKVAVSGKKRSQKLYRR 157 Query 233 RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIP 334 R + + + R P +I+ +RGM+P Sbjct 158 HSGRPGGMKEETFDQLQKRIPERIIEHAVRGMLP 191 >gi|6049142|gb|AAF02474.1|AF127598_1 putative 60S ribosomal protein L13a [Picea mariana] Length=78 Score = 28.9 bits (63), Expect(2) = 0.016 Identities = 11/19 (57%), Positives = 15/19 (78%), Gaps = 0/19 (0%) Frame = +3 Query 363 LARLKAYEGIPASYDKMKK 419 LARL A+EG+P YD+ K+ Sbjct 1 LARLXAFEGVPPPYDRKKR 19 Score = 28.5 bits (62), Expect(2) = 0.016 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%) Frame = +1 Query 400 PTIR*KRMXIPDALQXFEASXKGHKYXFIGQ 492 P R KRM IPDAL+ GHKY +G+ Sbjct 13 PYDRKKRMVIPDALKVLRLQ-PGHKYCLLGR 42 >gi|132659|sp|P12629|RK13_SPIOL 50S ribosomal protein L13, chloroplast precursor (CL13) gi|170133|gb|AAA34040.1| ribosomal protein L13 Length=250 Score = 36.2 bits (82), Expect = 0.063 Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 12/97 (12%) Frame = +2 Query 80 KKVVVDARHHMLGRLASILA-----KELLN-------GQKVVVVRCEEICMSGGLVRQKM 223 K VVDA +LGR+AS +A K L + G V+VV +++ +SG QK+ Sbjct 113 KWYVVDATDLILGRMASTIAIHIRGKNLASYTPSVDMGAFVIVVNADKVAVSGKKRTQKL 172 Query 224 KYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIP 334 R + + + R P +I+ +RGM+P Sbjct 173 YRRHSGRPGGLKEETFDQLQKRIPERIIEHAVRGMLP 209 >gi|1076557|pir||S54157 extensin-like protein - cowpea (fragment) Length=279 Score = 32.7 bits (73), Expect = 0.70 Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 8/50 (16%) Frame = -1 Query 232 HVLHLLPHQSTRHAYLFTSHHHNFLPIQQLLGQYGGQPS*HVVPCIHHHL 83 H+LHLLPH H ++ S HH+ L LL S H +HHHL Sbjct 234 HLLHLLPH----HLHMCISRHHHHLLHHHLL----MSTSPHHHHLLHHHL 275 Score = 31.6 bits (70), Expect = 1.6 Identities = 23/55 (41%), Positives = 27/55 (49%), Gaps = 19/55 (34%) Frame = -1 Query 235 PHVLHLLPHQSTRHAYLFTSHHHNFLPIQQLLGQYGGQPS*HVVPCI---HHHLL 80 PH+LHLLPH H +FTS H + LL H+ CI HHHLL Sbjct 185 PHLLHLLPH----HLPMFTSLH-----LLHLLPH-------HLPMCISPHHHHLL 223 Score = 30.8 bits (68), Expect = 2.7 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 8/50 (16%) Frame = -1 Query 232 HVLHLLPHQSTRHAYLFTSHHHNFLPIQQLLGQYGGQPS*HVVPCIHHHL 83 H+LHLLPH H ++ S HH+ L LL S H++ + HHL Sbjct 31 HLLHLLPH----HLHMCISRHHHHLLHHHLL----MFTSHHLLHLLPHHL 72 Score = 30.8 bits (68), Expect = 2.7 Identities = 28/84 (33%), Positives = 35/84 (41%), Gaps = 33/84 (39%) Frame = -1 Query 253 HTLPQ--EPHVLHLLPHQST------------RHAYLFTSHHHNFLPIQQLLGQYGGQPS 116 H LP H+LHLLPH RH +FTSHH + LL Sbjct 70 HHLPMFTSLHLLHLLPHHLPMCISPHHHHLLHRHLLMFTSHH-----LLHLLPH------ 118 Query 115 *HVVPCI---HHHLLGADPLTLTP 53 H+ CI HHHL P++ +P Sbjct 119 -HLHMCISRHHHHL----PMSTSP 137 Score = 30.0 bits (66), Expect = 4.5 Identities = 25/63 (39%), Positives = 28/63 (44%), Gaps = 21/63 (33%) Frame = -1 Query 253 HTLPQ--EPHVLHLLPHQSTRHAYLFTSHHHNFLPIQQLLGQYGGQPS*HVVPCI---HH 89 H LP PH HLL H H +FTSHH + LL H+ CI HH Sbjct 209 HHLPMCISPHHHHLLHH----HLLMFTSHH-----LLHLLPH-------HLHMCISRHHH 252 Query 88 HLL 80 HLL Sbjct 253 HLL 255 Score = 29.3 bits (64), Expect = 7.8 Identities = 24/62 (38%), Positives = 28/62 (45%), Gaps = 19/62 (30%) Frame = -1 Query 232 HVLHLLPHQSTRHAYLFTSHHHNFLPIQQLLGQYGGQPS*HVVPCI---HHHLLGADPLT 62 H+LHLLPH H +FTS H + LL H+ CI HHHLL L Sbjct 63 HLLHLLPH----HLPMFTSLH-----LLHLLPH-------HLPMCISPHHHHLLHRHLLM 106 Query 61 LT 56 T Sbjct 107 FT 108 Score = 29.3 bits (64), Expect = 7.8 Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 9/68 (13%) Frame = -1 Query 259 SVHTLPQEPHVLHLLPHQSTRHAYLFTSHHHNFLPIQQLLGQYGGQPS*HVV-----PCI 95 S H L PH LH+ + H + TS HH+ L + L P H++ CI Sbjct 109 SHHLLHLLPHHLHMCISRHHHHLPMSTSPHHHHL-LHHHLPMSTSHPLLHLLLHHLHMCI 167 Query 94 ---HHHLL 80 HHHLL Sbjct 168 SHHHHHLL 175 >gi|6049138|gb|AAF02472.1|AF127596_1 putative 60S ribosomal protein L13a [Picea glauca] Length=59 Score = 28.5 bits (62), Expect(2) = 0.99 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%) Frame = +1 Query 400 PTIR*KRMXIPDALQXFEASXKGHKYXFIGQ 492 P R KRM IPDAL+ GHKY +G+ Sbjct 8 PYDRKKRMVIPDALKVLRLQ-PGHKYCLLGR 37 Score = 22.7 bits (47), Expect(2) = 0.99 Identities = 7/14 (50%), Positives = 11/14 (78%), Gaps = 0/14 (0%) Frame = +3 Query 378 AYEGIPASYDKMKK 419 A+EG+P YD+ K+ Sbjct 1 AFEGVPPPYDRKKR 14 >gi|116056379|emb|CAL52668.1| mRNA cleavage and polyadenylation factor IA/II complex, subunit CLP1 (ISS) [Ostreococcus tauri] Length=428 Score = 31.6 bits (70), Expect = 1.6 Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 8/87 (9%) Frame = +2 Query 53 WCQGQGICAKKVVVDARHHMLGRLASILAKELLNGQ---KVVVVRCEEICM--SGGLVRQ 217 W G G+ ++++ AR + ++ +E L GQ K+ C+ M SGG+V + Sbjct 234 WIDGMGL---ELLLHAREALKIDHVLVIGQERLYGQLQQKLAGTDCQVFRMQKSGGVVER 290 Query 218 KMKYMRFLRKRMNTKPSHGPIHFRAPA 298 ++ R R RM + +GP APA Sbjct 291 TQEFRRATRDRMFKEYFYGPTGELAPA 317 >gi|38605901|emb|CAE04785.3| Gene info OSJNBb0020O11.13 [Oryza sativa (japonica cultivar-group)] Length=202 Score = 31.6 bits (70), Expect = 1.6 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%) Frame = +3 Query 54 GVRVRGSAPRRWWWM--QGTTC*EGWPPYWPR 143 GV V S+PRRWWW +G +G +W R Sbjct 37 GVAVASSSPRRWWWQRRKGERRRDGAARWWGR 68 >gi|110737000|dbj|BAF00455.1| hypothetical protein [Arabidopsis thaliana] Length=313 Score = 30.8 bits (68), Expect = 2.7 Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 9/57 (15%) Frame = -1 Query 286 EVDGTMRRLSVHTLPQ------EPHVLHLLPHQ---STRHAYLFTSHHHNFLPIQQL 143 +++ + L+ + PQ +PH + L P S+ A + T HHHN LP+ + Sbjct 99 DLENAKKELATYVGPQAMLPILQPHFMSLPPQPQRPSSSSASVLTQHHHNLLPMMAI 155 >gi|15240110|ref|NP_201488.1| UniGene infoGene info ASL1 [Arabidopsis thaliana] gi|29428002|sp|Q9FKZ3|ASL2_ARATH Gene info Protein ASYMMETRIC LEAVES2 (LOB domain-containing protein 36) gi|9758137|dbj|BAB08629.1| Gene info unnamed protein product [Arabidopsis thaliana] gi|45330807|dbj|BAD12422.1| UniGene infoGene info ASYMMETRIC LEAVES2-like gene 1 protein [Arabidopsis thaliana] Length=313 Score = 30.8 bits (68), Expect = 2.7 Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 9/57 (15%) Frame = -1 Query 286 EVDGTMRRLSVHTLPQ------EPHVLHLLPHQ---STRHAYLFTSHHHNFLPIQQL 143 +++ + L+ + PQ +PH + L P S+ A + T HHHN LP+ + Sbjct 99 DLENAKKELATYVGPQAMLPILQPHFMSLPPQPQRPSSSSASVLTQHHHNLLPMMAI 155
  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 15, 2007  4:53 AM
  Number of letters in database: 101,054,579
  Number of sequences in database:  283,349
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283349
Number of Hits to DB: 392
Number of extensions: 0
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 505
Length of database: 101054579
Length adjustment: 105
Effective length of query: 400
Effective length of database: 71302934
Effective search space: 4492084842
Effective search space used: 4492084842
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 63 (28.9 bits)