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BLASTX 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman 
(1997), "Gapped BLAST and PSI-BLAST: a new generation of 
protein database search programs", Nucleic Acids Res. 25:3389-3402.

RID: 1168931152-7968-84653515982.BLASTQ1


Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
           4,458,890 sequences; 1,532,996,420 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Query=  Contig60
Length=548


Distribution of 61 Blast Hits on the Query Sequence



                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|12323033|gb|AAG51510.1|AC058785_13  peptide chain release fact   247    2e-65
gi|42562784|ref|NP_176032.2|  translation release factor/ tran...   247    2e-65 UniGene infoGene info
gi|12321742|gb|AAG50902.1|AC069159_3  peptide chain release facto   234    1e-61
gi|115452569|ref|NP_001049885.1|  Os03g0305700 [Oryza sativa (...   232    6e-61 Gene info
gi|10092253|gb|AAG12666.1|AC027033_1  peptide chain release fa...   142    1e-33
gi|46406291|emb|CAG25777.1|  putative translation releasing facto   127    2e-29
gi|92867892|gb|ABE78013.1|  Peptide chain release factor 2 [Medic   127    3e-29
gi|30692913|ref|NP_851097.1|  HCF109 (HIGH CHLOROPHYLL FLUORES...   124    2e-28 UniGene infoGene info
gi|30692908|ref|NP_851096.1|  HCF109 (HIGH CHLOROPHYLL FLUORES...   124    2e-28 UniGene infoGene info
gi|115472651|ref|NP_001059924.1|  Os07g0546600 [Oryza sativa (...   123    5e-28 Gene info
gi|116058248|emb|CAL53437.1|  Mitochondrial polypeptide chain ...   115    1e-25
gi|116058310|emb|CAL53499.1|  Mitochondrial polypeptide chain ...   105    1e-22
gi|115462961|ref|NP_001055080.1|  Os05g0277300 [Oryza sativa (...  94.0    3e-19 Gene info
gi|48926665|gb|AAT47454.1|  putative peptide chain release fac...  94.0    3e-19 Gene info
gi|42571265|ref|NP_973706.1|  translation release factor/ tran...  91.3    2e-18 UniGene infoGene info
gi|3522941|gb|AAC34223.1|  putative peptide chain release factor   91.3    2e-18
gi|42569997|ref|NP_182225.3|  translation release factor/ tran...  91.3    2e-18 UniGene infoGene info
gi|116060788|emb|CAL57266.1|  unnamed protein product [Ostreococc  75.5    1e-13
gi|110735990|dbj|BAE99969.1|  putative peptide chain release fact  72.4    1e-12
gi|115486501|ref|NP_001068394.1|  Os11g0657100 [Oryza sativa (...  72.4    1e-12 Gene info
gi|92890252|gb|ABE90269.1|  Class I peptide chain release fact...  70.1    5e-12
gi|115463557|ref|NP_001055378.1|  Os05g0375600 [Oryza sativa (...  66.2    7e-11 Gene info
gi|12322377|gb|AAG51209.1|AC051630_6  peptide chain release fa...  63.9    3e-10
gi|22331914|ref|NP_191850.2|  APG3 (ALBINO AND PALE GREEN); tr...  63.9    3e-10 UniGene infoGene info
gi|7573420|emb|CAB87736.1|  translation releasing factor RF-1-...  63.9    3e-10
gi|30692851|ref|NP_174601.2|  translation release factor [Arab...  63.9    3e-10 UniGene infoGene info
gi|92886710|gb|ABE88459.1|  Class I peptide chain release fact...  60.1    5e-09
gi|115441511|ref|NP_001045035.1|  Os01g0887400 [Oryza sativa (...  58.5    1e-08 Gene info
gi|30692917|ref|NP_198466.2|  HCF109 (HIGH CHLOROPHYLL FLUORES...  55.1    2e-07 UniGene infoGene info
gi|22135990|gb|AAM91577.1|  putative protein [Arabidopsis thal...  50.1    5e-06 UniGene info
gi|30694592|ref|NP_191278.2|  translation release factor [Arabido  50.1    5e-06 UniGene infoGene info
gi|6735298|emb|CAB68125.1|  putative protein [Arabidopsis thalian  50.1    5e-06
gi|46575986|gb|AAT01347.1|  unknown protein [Oryza sativa (japoni  41.6    0.002 Gene info
gi|56784339|dbj|BAD82360.1|  unknown protein [Oryza sativa (ja...  40.4    0.004
gi|51038077|gb|AAT93880.1|  hypothetical protein [Oryza sativa (j  40.0    0.005
gi|116309001|emb|CAH66120.1|  OSIGBa0146N20.5 [Oryza sativa (indi  32.3    1.1  
gi|116309194|emb|CAH66289.1|  OSIGBa0161P06.6 [Oryza sativa (indi  32.3    1.1  
gi|116317795|emb|CAH65834.1|  OSIGBa0124C14.1 [Oryza sativa (indi  31.2    2.5  
gi|116308973|emb|CAH66097.1|  OSIGBa0114I04.4 [Oryza sativa (indi  31.2    2.5  
gi|116309186|emb|CAH66282.1|  OSIGBa0116O04.4 [Oryza sativa (indi  31.2    2.5  
gi|116309038|emb|CAH66151.1|  OSIGBa0097I11.3 [Oryza sativa (indi  31.2    2.5  
gi|116309187|emb|CAH66283.1|  OSIGBa0116O04.5 [Oryza sativa (indi  31.2    2.5  
gi|116309037|emb|CAH66150.1|  OSIGBa0097I11.2 [Oryza sativa (indi  31.2    2.5  
gi|110288688|gb|ABB46921.2|  retrotransposon protein, putative...  31.2    2.5  
gi|108708194|gb|ABF95989.1|  retrotransposon protein, putative...  31.2    2.5  
gi|90265093|emb|CAH67706.1|  H0512B01.1 [Oryza sativa (indica cul  31.2    2.5  
gi|38347272|emb|CAE05319.2|  OSJNBa0056L23.17 [Oryza sativa (japo  31.2    2.5   Gene info
gi|19881768|gb|AAM01169.1|AC113336_21  Putative retroelement [Ory  31.2    2.5   Gene info
gi|116309702|emb|CAH66749.1|  H0409D10.7 [Oryza sativa (indica cu  30.8    3.2  
gi|108705933|gb|ABF93728.1|  retrotransposon protein, putative...  30.4    4.2  
gi|116317875|emb|CAH65904.1|  H0207B04.5 [Oryza sativa (indica cu  29.6    7.1  
gi|116317882|emb|CAH65910.1|  OSIGBa0102O13.1 [Oryza sativa (indi  29.6    7.1  
gi|116308880|emb|CAH66015.1|  OSIGBa0093M15.5 [Oryza sativa (indi  29.6    7.1  
gi|115435252|ref|NP_001042384.1|  Os01g0213700 [Oryza sativa (...  29.6    7.1   Gene info
gi|19310546|gb|AAL85006.1|  unknown protein [Arabidopsis thaliana  29.6    7.1   UniGene info
gi|4103243|gb|AAD04807.1|  BIPOSTO [Arabidopsis thaliana]          29.6    7.1   UniGene info
gi|30687957|ref|NP_568400.2|  NPH4 (NON-PHOTOTROPHIC HYPOCOTYL...  29.6    7.1   UniGene infoGene info
gi|30687943|ref|NP_851046.1|  NPH4 (NON-PHOTOTROPHIC HYPOCOTYL...  29.6    7.1   UniGene infoGene info
gi|4104929|gb|AAD02218.1|  auxin response factor 7 [Arabidopsis t  29.6    7.1   UniGene info
gi|30687949|ref|NP_851047.1|  NPH4 (NON-PHOTOTROPHIC HYPOCOTYL...  29.6    7.1   UniGene infoGene info
gi|22165100|gb|AAM93717.1|  hypothetical protein [Oryza sativa...  29.3    9.3  
Alignments
>gi|12323033|gb|AAG51510.1|AC058785_13 peptide chain release factor 2, putative [Arabidopsis thaliana] Length=426 Score = 247 bits (631), Expect = 2e-65 Identities = 120/131 (91%), Positives = 126/131 (96%), Gaps = 0/131 (0%) Frame = +1 Query 13 EINESDLRIERFRAGGAGGQHVNTTESAVRIVHIPTGVTATCQNERSQHQNKASAMAVLQ 192 EIN+SDLRIERFR+GGAGGQH NTT+SAVRIVHIPTG+TATCQNERSQH NKASAMAVLQ Sbjct 286 EINDSDLRIERFRSGGAGGQHANTTDSAVRIVHIPTGITATCQNERSQHSNKASAMAVLQ 345 Query 193 SRLDQLEMARQAQMNAQHTQSLTEISWGNQIRTYVLHPYRMAKDLRTNYEVSDPDSVLEG 372 SRLDQLEMARQ MNAQHTQSLTEISWGNQIRTYVLHPYRM KDLRTNYEVSDPDSVLEG Sbjct 346 SRLDQLEMARQTAMNAQHTQSLTEISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEG 405 Query 373 DLDGFIMSYLS 405 DLDGFI+S+LS Sbjct 406 DLDGFILSFLS 416 >gi|42562784|ref|NP_176032.2| UniGene infoGene info translation release factor/ translation release factor, codon specific [Arabidopsis thaliana] Length=482 Score = 247 bits (631), Expect = 2e-65 Identities = 120/131 (91%), Positives = 126/131 (96%), Gaps = 0/131 (0%) Frame = +1 Query 13 EINESDLRIERFRAGGAGGQHVNTTESAVRIVHIPTGVTATCQNERSQHQNKASAMAVLQ 192 EIN+SDLRIERFR+GGAGGQH NTT+SAVRIVHIPTG+TATCQNERSQH NKASAMAVLQ Sbjct 342 EINDSDLRIERFRSGGAGGQHANTTDSAVRIVHIPTGITATCQNERSQHSNKASAMAVLQ 401 Query 193 SRLDQLEMARQAQMNAQHTQSLTEISWGNQIRTYVLHPYRMAKDLRTNYEVSDPDSVLEG 372 SRLDQLEMARQ MNAQHTQSLTEISWGNQIRTYVLHPYRM KDLRTNYEVSDPDSVLEG Sbjct 402 SRLDQLEMARQTAMNAQHTQSLTEISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEG 461 Query 373 DLDGFIMSYLS 405 DLDGFI+S+LS Sbjct 462 DLDGFILSFLS 472 >gi|12321742|gb|AAG50902.1|AC069159_3 peptide chain release factor 2, putative [Arabidopsis thaliana] Length=524 Score = 234 bits (598), Expect = 1e-61 Identities = 114/123 (92%), Positives = 118/123 (95%), Gaps = 0/123 (0%) Frame = +1 Query 13 EINESDLRIERFRAGGAGGQHVNTTESAVRIVHIPTGVTATCQNERSQHQNKASAMAVLQ 192 EIN+SDLRIERFR+GGAGGQH NTT+SAVRIVHIPTG+TATCQNERSQH NKASAMAVLQ Sbjct 367 EINDSDLRIERFRSGGAGGQHANTTDSAVRIVHIPTGITATCQNERSQHSNKASAMAVLQ 426 Query 193 SRLDQLEMARQAQMNAQHTQSLTEISWGNQIRTYVLHPYRMAKDLRTNYEVSDPDSVLEG 372 SRLDQLEMARQ MNAQHTQSLTEISWGNQIRTYVLHPYRM KDLRTNYEVSDPDSVLEG Sbjct 427 SRLDQLEMARQTAMNAQHTQSLTEISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEG 486 Query 373 DLD 381 DLD Sbjct 487 DLD 489 >gi|115452569|ref|NP_001049885.1| Gene info Os03g0305700 [Oryza sativa (japonica cultivar-group)] gi|108707729|gb|ABF95524.1| Gene info peptide chain release factor 2 family protein, expressed [Oryza sativa (japonica cultivar-group)] gi|113548356|dbj|BAF11799.1| Gene info Os03g0305700 [Oryza sativa (japonica cultivar-group)] Length=468 Score = 232 bits (592), Expect = 6e-61 Identities = 112/131 (85%), Positives = 122/131 (93%), Gaps = 0/131 (0%) Frame = +1 Query 13 EINESDLRIERFRAGGAGGQHVNTTESAVRIVHIPTGVTATCQNERSQHQNKASAMAVLQ 192 +I +SDLRIERFR+GG GGQH N TESAVRIVHIPTG+TATCQNERSQH NKASAMAVLQ Sbjct 331 QIKDSDLRIERFRSGGPGGQHANCTESAVRIVHIPTGITATCQNERSQHMNKASAMAVLQ 390 Query 193 SRLDQLEMARQAQMNAQHTQSLTEISWGNQIRTYVLHPYRMAKDLRTNYEVSDPDSVLEG 372 SRLDQLE+ARQAQMNA HTQSL+EISWGNQIR+YVLHPYRM KDLRTNYEVSDPDSVL G Sbjct 391 SRLDQLEIARQAQMNADHTQSLSEISWGNQIRSYVLHPYRMVKDLRTNYEVSDPDSVLNG 450 Query 373 DLDGFIMSYLS 405 DLD FI+++LS Sbjct 451 DLDDFILNFLS 461 >gi|10092253|gb|AAG12666.1|AC027033_1 peptide chain release factor, putative; 62597-62246 [Arabidopsis thaliana] Length=88 Score = 142 bits (357), Expect = 1e-33 Identities = 71/82 (86%), Positives = 73/82 (89%), Gaps = 0/82 (0%) Frame = +1 Query 163 NKASAMAVLQSRLDQLEMARQAQMNAQHTQSLTEISWGNQIRTYVLHPYRMAKDLRTNYE 342 NKASAMAVLQS LDQLEMARQ +NAQHT+SLTEISWGNQIRTYVLH YRM KDLRTNYE Sbjct 2 NKASAMAVLQSWLDQLEMARQTSVNAQHTRSLTEISWGNQIRTYVLHQYRMVKDLRTNYE 61 Query 343 VSDPDSVLEGDLDGFIMSYLSF 408 VSDPDSVLEGDLDGFI L F Sbjct 62 VSDPDSVLEGDLDGFISKLLIF 83 >gi|46406291|emb|CAG25777.1| putative translation releasing factor 2 [Cucumis sativus] Length=453 Score = 127 bits (320), Expect = 2e-29 Identities = 64/132 (48%), Positives = 85/132 (64%), Gaps = 0/132 (0%) Frame = +1 Query 13 EINESDLRIERFRAGGAGGQHVNTTESAVRIVHIPTGVTATCQNERSQHQNKASAMAVLQ 192 E+ E DL I RAGG GGQ+VN E+AVRI HIPTGVT C ERSQ NK A++ L+ Sbjct 312 ELPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTVRCTEERSQLANKIKALSRLK 371 Query 193 SRLDQLEMARQAQMNAQHTQSLTEISWGNQIRTYVLHPYRMAKDLRTNYEVSDPDSVLEG 372 ++L + ++A Q + WG QIR YV HPY++ KD+RT YE SD SV++G Sbjct 372 AKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGYETSDIVSVMDG 431 Query 373 DLDGFIMSYLSF 408 +L+ FI +YL + Sbjct 432 ELEPFIKAYLKY 443 >gi|92867892|gb|ABE78013.1| Peptide chain release factor 2 [Medicago truncatula] Length=475 Score = 127 bits (318), Expect = 3e-29 Identities = 65/130 (50%), Positives = 84/130 (64%), Gaps = 0/130 (0%) Frame = +1 Query 13 EINESDLRIERFRAGGAGGQHVNTTESAVRIVHIPTGVTATCQNERSQHQNKASAMAVLQ 192 EI E DL I RAGG GGQ+VN E+AVRI HIPTGVT C ERSQ NK A++ L+ Sbjct 332 EIPEEDLEISFSRAGGKGGQNVNKVETAVRITHIPTGVTLRCTEERSQLANKIKALSRLK 391 Query 193 SRLDQLEMARQAQMNAQHTQSLTEISWGNQIRTYVLHPYRMAKDLRTNYEVSDPDSVLEG 372 ++L + ++A Q + + WG QIR YV HPY++ KD+RT +E D SV++G Sbjct 392 AKLLVIAEEQRATEFKQIRGDVVKAEWGQQIRNYVFHPYKLVKDVRTGHETPDITSVIDG 451 Query 373 DLDGFIMSYL 402 +LD FI SYL Sbjct 452 ELDPFIKSYL 461 >gi|30692913|ref|NP_851097.1| UniGene infoGene info HCF109 (HIGH CHLOROPHYLL FLUORESCENT 109); translation release factor/ translation release factor, codon specific [Arabidopsis thaliana] gi|13568392|emb|CAC36322.1| UniGene infoGene info translation releasing factor2 [Arabidopsis thaliana] Length=455 Score = 124 bits (312), Expect = 2e-28 Identities = 64/130 (49%), Positives = 82/130 (63%), Gaps = 0/130 (0%) Frame = +1 Query 13 EINESDLRIERFRAGGAGGQHVNTTESAVRIVHIPTGVTATCQNERSQHQNKASAMAVLQ 192 EI E DL I RAGG GGQ+VN E+AVRI HIPTGV C ERSQ NK A+ L+ Sbjct 312 EIPEEDLDISFTRAGGKGGQNVNKVETAVRITHIPTGVAVRCTEERSQLANKTRALIRLK 371 Query 193 SRLDQLEMARQAQMNAQHTQSLTEISWGNQIRTYVLHPYRMAKDLRTNYEVSDPDSVLEG 372 ++L + ++A + + WG QIR YV HPY++ KD+RT +E SD SV++G Sbjct 372 AKLMVIAEEQRATEIKEIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDITSVMDG 431 Query 373 DLDGFIMSYL 402 DLD FI +YL Sbjct 432 DLDPFIKAYL 441 >gi|30692908|ref|NP_851096.1| UniGene infoGene info HCF109 (HIGH CHLOROPHYLL FLUORESCENT 109); translation release factor/ translation release factor, codon specific [Arabidopsis thaliana] gi|8777302|dbj|BAA96892.1| Gene info translation releasing factor RF-2 [Arabidopsis thaliana] gi|15810391|gb|AAL07083.1| UniGene infoGene info putative translation releasing factor RF-2 [Arabidopsis thaliana] gi|21436317|gb|AAM51328.1| UniGene infoGene info putative translation releasing factor RF-2 [Arabidopsis thaliana] gi|21536944|gb|AAM61285.1| UniGene infoGene info translation releasing factor RF-2 [Arabidopsis thaliana] Length=456 Score = 124 bits (312), Expect = 2e-28 Identities = 64/130 (49%), Positives = 82/130 (63%), Gaps = 0/130 (0%) Frame = +1 Query 13 EINESDLRIERFRAGGAGGQHVNTTESAVRIVHIPTGVTATCQNERSQHQNKASAMAVLQ 192 EI E DL I RAGG GGQ+VN E+AVRI HIPTGV C ERSQ NK A+ L+ Sbjct 313 EIPEEDLDISFTRAGGKGGQNVNKVETAVRITHIPTGVAVRCTEERSQLANKTRALIRLK 372 Query 193 SRLDQLEMARQAQMNAQHTQSLTEISWGNQIRTYVLHPYRMAKDLRTNYEVSDPDSVLEG 372 ++L + ++A + + WG QIR YV HPY++ KD+RT +E SD SV++G Sbjct 373 AKLMVIAEEQRATEIKEIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTGHETSDITSVMDG 432 Query 373 DLDGFIMSYL 402 DLD FI +YL Sbjct 433 DLDPFIKAYL 442 >gi|115472651|ref|NP_001059924.1| Gene info Os07g0546600 [Oryza sativa (japonica cultivar-group)] gi|33146529|dbj|BAC79675.1| Gene info putative translation releasing factor2 [Oryza sativa (japonica cultivar-group)] gi|113611460|dbj|BAF21838.1| Gene info Os07g0546600 [Oryza sativa (japonica cultivar-group)] Length=460 Score = 123 bits (308), Expect = 5e-28 Identities = 62/132 (46%), Positives = 83/132 (62%), Gaps = 0/132 (0%) Frame = +1 Query 13 EINESDLRIERFRAGGAGGQHVNTTESAVRIVHIPTGVTATCQNERSQHQNKASAMAVLQ 192 EI E DL I RAGG GGQ+VN E+AVR+VHIPTG+ C ERSQ NK A++ L+ Sbjct 317 EIPEEDLEISFTRAGGKGGQNVNKVETAVRMVHIPTGIAVRCTEERSQLANKIKALSRLK 376 Query 193 SRLDQLEMARQAQMNAQHTQSLTEISWGNQIRTYVLHPYRMAKDLRTNYEVSDPDSVLEG 372 ++L + ++A Q + WG QIR YV HPY++ KD+RT E SD V++G Sbjct 377 AKLLVIAEEQRASEIKQIRGDAVKAEWGQQIRNYVFHPYKLVKDVRTACETSDITGVMDG 436 Query 373 DLDGFIMSYLSF 408 +LD FI +YL + Sbjct 437 ELDTFIRAYLKY 448 >gi|116058248|emb|CAL53437.1| Mitochondrial polypeptide chain release factor (ISS) [Ostreococcus tauri] Length=419 Score = 115 bits (288), Expect = 1e-25 Identities = 63/142 (44%), Positives = 87/142 (61%), Gaps = 5/142 (3%) Frame = +1 Query 13 EINESDLRIERFRAGGAGGQHVNTTESAVRIVHIPTGVTATCQNERSQHQNKASAMAVLQ 192 ++ E DL I R+ GAGGQ+VN E+AVRI H+PTG++ + R+Q N+ +AM ++ Sbjct 280 KVPEGDLEITTMRSSGAGGQNVNKLETAVRIKHVPTGISVKAEEHRTQALNRQAAMLRIK 339 Query 193 SRLDQL-EMARQAQMNAQHTQSLTEISWGNQIRTYVLHPYRMAKDLRTNYEVSDPDSVLE 369 ++L L E AR A + A+ + + WG QIR YVLHPY+M KD+RT E SD VL Sbjct 340 AKLTALAEEARVADI-AELRGDIVKAEWGQQIRNYVLHPYKMVKDVRTGVETSDVTRVLN 398 Query 370 GDLDGFIMSYLSFVRWTKMKVE 435 G LD ++ YL RW K E Sbjct 399 GGLDEYMNGYL---RWKASKNE 417 >gi|116058310|emb|CAL53499.1| Mitochondrial polypeptide chain release factor (ISS) [Ostreococcus tauri] Length=1134 Score = 105 bits (261), Expect = 1e-22 Identities = 62/133 (46%), Positives = 84/133 (63%), Gaps = 9/133 (6%) Frame = +1 Query 13 EINESDLRIERFRAGGAGGQHVNTTESAVRIVHIPTGVTATCQNERSQHQNKASAMAVLQ 192 +I + D+RIE RA GAGGQHVNTT SAVR+ H+PTG+T Q+ERSQH+NKA A +VL+ Sbjct 755 DIRDEDVRIETMRASGAGGQHVNTTNSAVRLTHLPTGITVAIQDERSQHKNKAKAFSVLK 814 Query 193 SRLDQLEMARQAQMNAQHTQSLTEISWGN---QIRTYVLHPYRMAKDLRTNYEVSDPDSV 363 SRL +E + A A+ SL I G+ ++RTY P KD R + VS Sbjct 815 SRLYDMEREKLANERAELRSSL--IGTGDRSEKVRTYNF-PQGRVKDHRVDGNVSGD--- 868 Query 364 LEGDLDGFIMSYL 402 ++G +DGF++ L Sbjct 869 IKGFMDGFLLDDL 881 >gi|115462961|ref|NP_001055080.1| Gene info Os05g0277300 [Oryza sativa (japonica cultivar-group)] gi|113578631|dbj|BAF16994.1| Gene info Os05g0277300 [Oryza sativa (japonica cultivar-group)] Length=349 Score = 94.0 bits (232), Expect = 3e-19 Identities = 55/132 (41%), Positives = 78/132 (59%), Gaps = 3/132 (2%) Frame = +1 Query 13 EINESDLRIERFRAGGAGGQHVNTTESAVRIVHIPTGVTATCQNERSQHQNKASAMAVLQ 192 ++ DLRI+ +R+GG+GGQ VNTT+SAVRI H+PTG Q+ERSQHQNKA A+ VL+ Sbjct 206 QLRNEDLRIDTYRSGGSGGQSVNTTDSAVRITHVPTGTVVAIQDERSQHQNKAKALKVLR 265 Query 193 SRLDQLEMAR-QAQMNAQHTQSLTEISWGNQIRTYVLHPYRMAKDLRTNYEVSDPDSVLE 369 +RL ++E R + ++ + +IRTY P D R + V+E Sbjct 266 ARLYEIERHRLHMDRSKLRSEQIGSGDRSERIRTYNF-PQGRVTDHRVGITHHSIEDVME 324 Query 370 GD-LDGFIMSYL 402 G+ LD FI + L Sbjct 325 GESLDIFIDALL 336 >gi|48926665|gb|AAT47454.1| Gene info putative peptide chain release factor [Oryza sativa (japonica cultivar-group)] Length=350 Score = 94.0 bits (232), Expect = 3e-19 Identities = 55/132 (41%), Positives = 78/132 (59%), Gaps = 3/132 (2%) Frame = +1 Query 13 EINESDLRIERFRAGGAGGQHVNTTESAVRIVHIPTGVTATCQNERSQHQNKASAMAVLQ 192 ++ DLRI+ +R+GG+GGQ VNTT+SAVRI H+PTG Q+ERSQHQNKA A+ VL+ Sbjct 207 QLRNEDLRIDTYRSGGSGGQSVNTTDSAVRITHVPTGTVVAIQDERSQHQNKAKALKVLR 266 Query 193 SRLDQLEMAR-QAQMNAQHTQSLTEISWGNQIRTYVLHPYRMAKDLRTNYEVSDPDSVLE 369 +RL ++E R + ++ + +IRTY P D R + V+E Sbjct 267 ARLYEIERHRLHMDRSKLRSEQIGSGDRSERIRTYNF-PQGRVTDHRVGITHHSIEDVME 325 Query 370 GD-LDGFIMSYL 402 G+ LD FI + L Sbjct 326 GESLDIFIDALL 337 >gi|42571265|ref|NP_973706.1| UniGene infoGene info translation release factor/ translation release factor, codon specific [Arabidopsis thaliana] Length=348 Score = 91.3 bits (225), Expect = 2e-18 Identities = 52/132 (39%), Positives = 79/132 (59%), Gaps = 3/132 (2%) Frame = +1 Query 13 EINESDLRIERFRAGGAGGQHVNTTESAVRIVHIPTGVTATCQNERSQHQNKASAMAVLQ 192 ++ DLRI+ +R+GG+GGQH NTT SAVRI+H+PTG+ + Q+ERSQH N+A A+ VL Sbjct 203 QLRNEDLRIDTYRSGGSGGQHANTTNSAVRIIHLPTGMMVSIQDERSQHMNRAKALKVLC 262 Query 193 SRLDQLEMAR-QAQMNAQHTQSLTEISWGNQIRTYVLHPYRMAKDLRTNYEVSDPDSVLE 369 +RL ++E R Q+ + + + +IRTY P D R + +++ Sbjct 263 ARLYEIERLRIQSSRSKLRSDQIGSGDRSGRIRTYNF-PQGRVTDHRVGITHHAIEDMMQ 321 Query 370 GD-LDGFIMSYL 402 G+ LD FI + L Sbjct 322 GENLDMFIDALL 333 >gi|3522941|gb|AAC34223.1| putative peptide chain release factor [Arabidopsis thaliana] Length=395 Score = 91.3 bits (225), Expect = 2e-18 Identities = 52/132 (39%), Positives = 79/132 (59%), Gaps = 3/132 (2%) Frame = +1 Query 13 EINESDLRIERFRAGGAGGQHVNTTESAVRIVHIPTGVTATCQNERSQHQNKASAMAVLQ 192 ++ DLRI+ +R+GG+GGQH NTT SAVRI+H+PTG+ + Q+ERSQH N+A A+ VL Sbjct 250 QLRNEDLRIDTYRSGGSGGQHANTTNSAVRIIHLPTGMMVSIQDERSQHMNRAKALKVLC 309 Query 193 SRLDQLEMAR-QAQMNAQHTQSLTEISWGNQIRTYVLHPYRMAKDLRTNYEVSDPDSVLE 369 +RL ++E R Q+ + + + +IRTY P D R + +++ Sbjct 310 ARLYEIERLRIQSSRSKLRSDQIGSGDRSGRIRTYNF-PQGRVTDHRVGITHHAIEDMMQ 368 Query 370 GD-LDGFIMSYL 402 G+ LD FI + L Sbjct 369 GENLDMFIDALL 380 >gi|42569997|ref|NP_182225.3| UniGene infoGene info translation release factor/ translation release factor, codon specific [Arabidopsis thaliana] Length=413 Score = 91.3 bits (225), Expect = 2e-18 Identities = 52/132 (39%), Positives = 79/132 (59%), Gaps = 3/132 (2%) Frame = +1 Query 13 EINESDLRIERFRAGGAGGQHVNTTESAVRIVHIPTGVTATCQNERSQHQNKASAMAVLQ 192 ++ DLRI+ +R+GG+GGQH NTT SAVRI+H+PTG+ + Q+ERSQH N+A A+ VL Sbjct 268 QLRNEDLRIDTYRSGGSGGQHANTTNSAVRIIHLPTGMMVSIQDERSQHMNRAKALKVLC 327 Query 193 SRLDQLEMAR-QAQMNAQHTQSLTEISWGNQIRTYVLHPYRMAKDLRTNYEVSDPDSVLE 369 +RL ++E R Q+ + + + +IRTY P D R + +++ Sbjct 328 ARLYEIERLRIQSSRSKLRSDQIGSGDRSGRIRTYNF-PQGRVTDHRVGITHHAIEDMMQ 386 Query 370 GD-LDGFIMSYL 402 G+ LD FI + L Sbjct 387 GENLDMFIDALL 398 >gi|116060788|emb|CAL57266.1| unnamed protein product [Ostreococcus tauri] Length=1699 Score = 75.5 bits (184), Expect = 1e-13 Identities = 43/128 (33%), Positives = 77/128 (60%), Gaps = 5/128 (3%) Frame = +1 Query 13 EINESDLRIERFRAGGAGGQHVNTTESAVRIVHIPTGVTATCQNERSQHQNKASAMAVLQ 192 +I+E DL I R+GGAGGQ+VN E+A+ ++H PTG+ C ER+Q +N+ AM +L+ Sbjct 269 QIDEKDLDISTARSGGAGGQNVNKVETAIDLMHKPTGIRVFCTEERTQLKNRIRAMQILR 328 Query 193 SRLDQLEMARQAQ-MNAQHTQSLTEISWGNQIRTYVLHPYRMAKD-LRTNYEVSDPDSVL 366 ++L ++++ Q + ++ + + S +IRTY R++ + TN+ + + L Sbjct 329 AKLFEIQLEEQQKAISDKRKSQVGSGSRSEKIRTYNWKDSRVSDHRIGTNFPL---QTFL 385 Query 367 EGDLDGFI 390 +GD+ G I Sbjct 386 DGDIKGAI 393 >gi|110735990|dbj|BAE99969.1| putative peptide chain release factor [Arabidopsis thaliana] Length=256 Score = 72.4 bits (176), Expect = 1e-12 Identities = 29/54 (53%), Positives = 44/54 (81%), Gaps = 0/54 (0%) Frame = +1 Query 13 EINESDLRIERFRAGGAGGQHVNTTESAVRIVHIPTGVTATCQNERSQHQNKAS 174 ++ DLRI+ +R+GG+GGQH NTT SAVRI+H+PTG+ + Q+ERSQH ++++ Sbjct 203 QLRNEDLRIDTYRSGGSGGQHANTTNSAVRIIHLPTGMMVSIQDERSQHMSQST 256 >gi|115486501|ref|NP_001068394.1| Gene info Os11g0657100 [Oryza sativa (japonica cultivar-group)] gi|77552370|gb|ABA95167.1| Gene info Peptide chain release factor 1, putative, expressed [Oryza sativa (japonica cultivar-group)] gi|113645616|dbj|BAF28757.1| Gene info Os11g0657100 [Oryza sativa (japonica cultivar-group)] Length=416 Score = 72.4 bits (176), Expect = 1e-12 Identities = 42/129 (32%), Positives = 74/129 (57%), Gaps = 5/129 (3%) Frame = +1 Query 16 INESDLRIERFRAGGAGGQHVNTTESAVRIVHIPTGVTATCQNERSQHQNKASAMAVLQS 195 I+ D+ ++ R+GGAGGQ+VN E+AV ++H PTG+ C ERSQ QN+ A +L++ Sbjct 269 IDPKDIELKTARSGGAGGQNVNKVETAVDLIHKPTGIRIFCTEERSQLQNRERAFQLLRA 328 Query 196 RLDQLEMARQAQ-MNAQHTQSLTEISWGNQIRTYVLHPYRMAKD-LRTNYEVSDPDSVLE 369 +L ++++ Q + + Q + + +IRTY R+ L+ N+E++ L Sbjct 329 KLYEIKLREQQESIRNQRKLQVGTGARSEKIRTYNYKDNRVTDHRLKMNFELT---GFLM 385 Query 370 GDLDGFIMS 396 GD++ + S Sbjct 386 GDIESAVQS 394 >gi|92890252|gb|ABE90269.1| Class I peptide chain release factor; PCRF [Medicago truncatula] Length=398 Score = 70.1 bits (170), Expect = 5e-12 Identities = 37/114 (32%), Positives = 65/114 (57%), Gaps = 2/114 (1%) Frame = +1 Query 67 GQHVNTTESAVRIVHIPTGVTATCQNERSQHQNKASAMAVLQSRLDQLEMARQA-QMNAQ 243 G+ T+ V I HIPTG+T ERSQ NK A+ L+++L + + + +N Sbjct 283 GEQKRQTQRIVCIHHIPTGITVQSSGERSQFANKMKALNRLKAKLQVIAIEQGVGSINGI 342 Query 244 HTQSLTEISWGNQIRTYVLHPYRMAKDLRTNYEVSDPDSVLEGDLDGFIMSYLS 405 + + W + R YV HPY++ D++T+ E+SD +SVL+G++ I ++++ Sbjct 343 VKDKIVNL-WEEKTRRYVSHPYKLVHDVKTDIEMSDLNSVLDGNIGPLIAAHIN 395 >gi|115463557|ref|NP_001055378.1| Gene info Os05g0375600 [Oryza sativa (japonica cultivar-group)] gi|113578929|dbj|BAF17292.1| Gene info Os05g0375600 [Oryza sativa (japonica cultivar-group)] Length=373 Score = 66.2 bits (160), Expect = 7e-11 Identities = 42/126 (33%), Positives = 69/126 (54%), Gaps = 5/126 (3%) Frame = +1 Query 16 INESDLRIERFRAGGAGGQHVNTTESAVRIVHIPTGVTATCQNERSQHQNKASAMAVLQS 195 ++E+DL I + H N SA+R+ HI TGVTA ERS NK A++ L++ Sbjct 243 LDENDLEISPSPSDHKRRDHRN---SAIRVQHIRTGVTAESSGERSYFANKMKAISRLKA 299 Query 196 RLDQLEM-ARQAQMNAQHTQSLTEISWGNQIRTYVLHPYRMAKDLRTNYEVSDPDSVLEG 372 +L + R + + Q++ E+ + + R Y P ++ DL T ++S+ +SVL+G Sbjct 300 KLLVISRELRSSNLKTIKRQTVEEL-YSRETRRYKFGPQKLVHDLNTGLQLSELNSVLDG 358 Query 373 DLDGFI 390 D+D FI Sbjct 359 DIDPFI 364 >gi|12322377|gb|AAG51209.1|AC051630_6 peptide chain release factor, putative; 8726-9996 [Arabidopsis thaliana] Length=255 Score = 63.9 bits (154), Expect = 3e-10 Identities = 29/56 (51%), Positives = 40/56 (71%), Gaps = 0/56 (0%) Frame = +1 Query 34 RIERFRAGGAGGQHVNTTESAVRIVHIPTGVTATCQNERSQHQNKASAMAVLQSRL 201 R+E FR G GGQH N +SAVR+ H+PTG+ A +RSQH+N+ASA+ L++ L Sbjct 99 RLETFRVSGPGGQHRNKRDSAVRLKHLPTGIVAQAVEDRSQHKNRASALNRLRTLL 154 >gi|22331914|ref|NP_191850.2| UniGene infoGene info APG3 (ALBINO AND PALE GREEN); translation release factor/ translation release factor, codon specific [Arabidopsis thaliana] gi|19699096|gb|AAL90914.1| UniGene infoGene info AT3g62910/T20O10_10 [Arabidopsis thaliana] gi|21928033|gb|AAM78045.1| UniGene infoGene info AT3g62910/T20O10_10 [Arabidopsis thaliana] gi|34392768|dbj|BAC82693.1| UniGene infoGene info Chloroplast Release Factor 1 [Arabidopsis thaliana] Length=422 Score = 63.9 bits (154), Expect = 3e-10 Identities = 39/131 (29%), Positives = 74/131 (56%), Gaps = 9/131 (6%) Frame = +1 Query 16 INESDLRIERFRAGGAGGQHVNTTESAVRIVHIPTGVTATCQNERSQHQNKASAMAVLQS 195 I+ D+ + R+GGAGGQ+VN E+A+ + H P+G+ C ER+Q +NKA A +L++ Sbjct 272 IDPKDIELTSARSGGAGGQNVNKVETAIDLFHKPSGIRIFCTEERTQIRNKARAFQLLRA 331 Query 196 RLDQLEMARQAQMNAQHTQSLTEISWG---NQIRTYVLHPYRMAKD-LRTNYEVSDPDSV 363 +L ++++ Q + +S ++ G +IRTY R+ L+ N+ ++ + Sbjct 332 KLYEIKVREQQEKIRNERKS--QVGTGARSEKIRTYNYKDSRVTDHRLKMNFALT---TF 386 Query 364 LEGDLDGFIMS 396 L+G L+ + + Sbjct 387 LDGALEDAVQA 397 >gi|7573420|emb|CAB87736.1| translation releasing factor RF-1-like protein [Arabidopsis thaliana] Length=419 Score = 63.9 bits (154), Expect = 3e-10 Identities = 39/131 (29%), Positives = 74/131 (56%), Gaps = 9/131 (6%) Frame = +1 Query 16 INESDLRIERFRAGGAGGQHVNTTESAVRIVHIPTGVTATCQNERSQHQNKASAMAVLQS 195 I+ D+ + R+GGAGGQ+VN E+A+ + H P+G+ C ER+Q +NKA A +L++ Sbjct 269 IDPKDIELTSARSGGAGGQNVNKVETAIDLFHKPSGIRIFCTEERTQIRNKARAFQLLRA 328 Query 196 RLDQLEMARQAQMNAQHTQSLTEISWG---NQIRTYVLHPYRMAKD-LRTNYEVSDPDSV 363 +L ++++ Q + +S ++ G +IRTY R+ L+ N+ ++ + Sbjct 329 KLYEIKVREQQEKIRNERKS--QVGTGARSEKIRTYNYKDSRVTDHRLKMNFALT---TF 383 Query 364 LEGDLDGFIMS 396 L+G L+ + + Sbjct 384 LDGALEDAVQA 394 >gi|30692851|ref|NP_174601.2| UniGene infoGene info translation release factor [Arabidopsis thaliana] gi|12322576|gb|AAG51290.1|AC027035_13 Gene info unknown protein [Arabidopsis thaliana] gi|26450075|dbj|BAC42157.1| UniGene infoGene info putative peptide chain release factor [Arabidopsis thaliana] gi|29824307|gb|AAP04114.1| UniGene infoGene info putative peptide chain release factor [Arabidopsis thaliana] Length=257 Score = 63.9 bits (154), Expect = 3e-10 Identities = 29/56 (51%), Positives = 40/56 (71%), Gaps = 0/56 (0%) Frame = +1 Query 34 RIERFRAGGAGGQHVNTTESAVRIVHIPTGVTATCQNERSQHQNKASAMAVLQSRL 201 R+E FR G GGQH N +SAVR+ H+PTG+ A +RSQH+N+ASA+ L++ L Sbjct 99 RLETFRVSGPGGQHRNKRDSAVRLKHLPTGIVAQAVEDRSQHKNRASALNRLRTLL 154 >gi|92886710|gb|ABE88459.1| Class I peptide chain release factor; Helix-turn-helix, Fis-type [Medicago truncatula] Length=313 Score = 60.1 bits (144), Expect = 5e-09 Identities = 32/68 (47%), Positives = 42/68 (61%), Gaps = 1/68 (1%) Frame = +1 Query 46 FRAGGAGGQHVNTTESAVRIVHIPTGVTATCQNERSQHQNKASAMAVLQSRLDQLEMARQ 225 F+ G GGQH N ESAVR+ H+PTG+ A +RSQH N+ASA+ L+S L L+ R Sbjct 86 FKTSGPGGQHRNKRESAVRLKHLPTGIIAQAGEDRSQHMNRASAIKRLRS-LIALKEGRS 144 Query 226 AQMNAQHT 249 A + T Sbjct 145 AASYEEQT 152 >gi|115441511|ref|NP_001045035.1| Gene info Os01g0887400 [Oryza sativa (japonica cultivar-group)] gi|113534566|dbj|BAF06949.1| Gene info Os01g0887400 [Oryza sativa (japonica cultivar-group)] Length=682 Score = 58.5 bits (140), Expect = 1e-08 Identities = 27/50 (54%), Positives = 36/50 (72%), Gaps = 0/50 (0%) Frame = +1 Query 46 FRAGGAGGQHVNTTESAVRIVHIPTGVTATCQNERSQHQNKASAMAVLQS 195 F+A G GGQH N ESAVR+ H PTG+ A +RSQH N+ASA++ L++ Sbjct 91 FKASGPGGQHRNKRESAVRLRHRPTGIIAQAVEDRSQHMNRASALSRLRT 140 >gi|30692917|ref|NP_198466.2| UniGene infoGene info HCF109 (HIGH CHLOROPHYLL FLUORESCENT 109); translation release factor [Arabidopsis thaliana] Length=391 Score = 55.1 bits (131), Expect = 2e-07 Identities = 27/42 (64%), Positives = 29/42 (69%), Gaps = 0/42 (0%) Frame = +1 Query 13 EINESDLRIERFRAGGAGGQHVNTTESAVRIVHIPTGVTATC 138 EI E DL I RAGG GGQ+VN E+AVRI HIPTGV C Sbjct 313 EIPEEDLDISFTRAGGKGGQNVNKVETAVRITHIPTGVAVRC 354 >gi|22135990|gb|AAM91577.1| UniGene info putative protein [Arabidopsis thaliana] gi|30725574|gb|AAP37809.1| UniGene info At3g57190 [Arabidopsis thaliana] Length=372 Score = 50.1 bits (118), Expect = 5e-06 Identities = 32/110 (29%), Positives = 61/110 (55%), Gaps = 3/110 (2%) Frame = +1 Query 88 ESAVRIVHIPTGVTATCQNERSQHQNKASAMAVLQSRLDQLEMARQAQM-NAQHTQSLTE 264 E+ V I HIP+GVT ER++ N+ A+ L+++L L +A++ ++ + S Sbjct 260 ENMVCIHHIPSGVTLQSSGERNRFANRIKALNRLKAKL--LVIAKEQKVSDVNKIDSKNI 317 Query 265 ISWGNQIRTYVLHPYRMAKDLRTNYEVSDPDSVLEGDLDGFIMSYLSFVR 414 + + R+YV ++M D +T E+ D SVL+G++ + +++S R Sbjct 318 LEPREETRSYVSKGHKMVVDRKTGLEILDLKSVLDGNIGPLLGAHISMRR 367 >gi|30694592|ref|NP_191278.2| UniGene infoGene info translation release factor [Arabidopsis thaliana] Length=406 Score = 50.1 bits (118), Expect = 5e-06 Identities = 32/110 (29%), Positives = 61/110 (55%), Gaps = 3/110 (2%) Frame = +1 Query 88 ESAVRIVHIPTGVTATCQNERSQHQNKASAMAVLQSRLDQLEMARQAQM-NAQHTQSLTE 264 E+ V I HIP+GVT ER++ N+ A+ L+++L L +A++ ++ + S Sbjct 294 ENMVCIHHIPSGVTLQSSGERNRFANRIKALNRLKAKL--LVIAKEQKVSDVNKIDSKNI 351 Query 265 ISWGNQIRTYVLHPYRMAKDLRTNYEVSDPDSVLEGDLDGFIMSYLSFVR 414 + + R+YV ++M D +T E+ D SVL+G++ + +++S R Sbjct 352 LEPREETRSYVSKGHKMVVDRKTGLEILDLKSVLDGNIGPLLGAHISMRR 401 >gi|6735298|emb|CAB68125.1| putative protein [Arabidopsis thaliana] Length=409 Score = 50.1 bits (118), Expect = 5e-06 Identities = 32/110 (29%), Positives = 61/110 (55%), Gaps = 3/110 (2%) Frame = +1 Query 88 ESAVRIVHIPTGVTATCQNERSQHQNKASAMAVLQSRLDQLEMARQAQM-NAQHTQSLTE 264 E+ V I HIP+GVT ER++ N+ A+ L+++L L +A++ ++ + S Sbjct 297 ENMVCIHHIPSGVTLQSSGERNRFANRIKALNRLKAKL--LVIAKEQKVSDVNKIDSKNI 354 Query 265 ISWGNQIRTYVLHPYRMAKDLRTNYEVSDPDSVLEGDLDGFIMSYLSFVR 414 + + R+YV ++M D +T E+ D SVL+G++ + +++S R Sbjct 355 LEPREETRSYVSKGHKMVVDRKTGLEILDLKSVLDGNIGPLLGAHISMRR 404 >gi|46575986|gb|AAT01347.1| Gene info unknown protein [Oryza sativa (japonica cultivar-group)] Length=499 Score = 41.6 bits (96), Expect = 0.002 Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 4/94 (4%) Frame = +1 Query 16 INESDLRIERFRAGGAGGQHVNTTESAVRIVHIPTGVTATCQNERSQHQNKASAMAVLQS 195 ++E+DL I + H N SA+R+ HI TGVTA ERS NK A++ L++ Sbjct 196 LDENDLEISPSPSDHKRRDHRN---SAIRVQHIRTGVTAESSGERSYFANKMKAISRLKA 252 Query 196 RLDQLEM-ARQAQMNAQHTQSLTEISWGNQIRTY 294 +L + R + + Q++ E+ RTY Sbjct 253 KLLVISRELRSSNLKTIKRQTVEELYSRETRRTY 286 >gi|56784339|dbj|BAD82360.1| unknown protein [Oryza sativa (japonica cultivar-group)] gi|56785244|dbj|BAD82132.1| unknown protein [Oryza sativa (japonica cultivar-group)] Length=137 Score = 40.4 bits (93), Expect = 0.004 Identities = 18/29 (62%), Positives = 21/29 (72%), Gaps = 0/29 (0%) Frame = +1 Query 46 FRAGGAGGQHVNTTESAVRIVHIPTGVTA 132 F+A G GGQH N ESAVR+ H PTG+ A Sbjct 91 FKASGPGGQHRNKRESAVRLRHRPTGIIA 119 >gi|51038077|gb|AAT93880.1| hypothetical protein [Oryza sativa (japonica cultivar-group)] Length=481 Score = 40.0 bits (92), Expect = 0.005 Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 3/62 (4%) Frame = +1 Query 16 INESDLRIERFRAGGAGGQHVNTTESAVRIVHIPTGVTATCQNERSQHQNKASAMAVLQS 195 ++E+DL I + H N SA+R+ HI TGVTA ERS NK A++ L++ Sbjct 196 LDENDLEISPSPSDHKRRDHRN---SAIRVQHIRTGVTAESSGERSYFANKMKAISRLKA 252 Query 196 RL 201 +L Sbjct 253 KL 254 >gi|116309001|emb|CAH66120.1| OSIGBa0146N20.5 [Oryza sativa (indica cultivar-group)] Length=1481 Score = 32.3 bits (72), Expect = 1.1 Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 3/53 (5%) Frame = +1 Query 40 ERFRAGGAGGQHVNTTE--SAVRIVHIPTGVTATCQNE-RSQHQNKASAMAVL 189 + FR G AGG+ + E +A R HIPTGV A + E R+ +Q S L Sbjct 121 DHFRQGRAGGEPITWQEFTAAFRKTHIPTGVVALKKREFRALNQGSRSVTEYL 173 >gi|116309194|emb|CAH66289.1| OSIGBa0161P06.6 [Oryza sativa (indica cultivar-group)] Length=1433 Score = 32.3 bits (72), Expect = 1.1 Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 3/53 (5%) Frame = +1 Query 40 ERFRAGGAGGQHVNTTE--SAVRIVHIPTGVTATCQNE-RSQHQNKASAMAVL 189 + FR G AGG+ + E +A R HIPTGV A + E R+ +Q S L Sbjct 121 DHFRQGRAGGEPITWQEFTAAFRKTHIPTGVVALKKREFRALNQGSRSVTEYL 173 >gi|116317795|emb|CAH65834.1| OSIGBa0124C14.1 [Oryza sativa (indica cultivar-group)] Length=1481 Score = 31.2 bits (69), Expect = 2.5 Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 3/53 (5%) Frame = +1 Query 40 ERFRAGGAGGQHVNTTE--SAVRIVHIPTGVTATCQNE-RSQHQNKASAMAVL 189 + FR G AGG+ + E +A + HIPTGV A + E R+ +Q S L Sbjct 121 DHFRQGRAGGEPITWQEFTAAFKKTHIPTGVVALKKREFRALNQGSRSVTEYL 173 >gi|116308973|emb|CAH66097.1| OSIGBa0114I04.4 [Oryza sativa (indica cultivar-group)] Length=1455 Score = 31.2 bits (69), Expect = 2.5 Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 3/53 (5%) Frame = +1 Query 40 ERFRAGGAGGQHVNTTE--SAVRIVHIPTGVTATCQNE-RSQHQNKASAMAVL 189 + FR G AGG+ + E +A + HIPTGV A + E R+ +Q S L Sbjct 123 DHFRQGRAGGEPITWQEFTAAFKKTHIPTGVVALKKREFRALNQGSRSVTEYL 175 >gi|116309186|emb|CAH66282.1| OSIGBa0116O04.4 [Oryza sativa (indica cultivar-group)] Length=1527 Score = 31.2 bits (69), Expect = 2.5 Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 3/53 (5%) Frame = +1 Query 40 ERFRAGGAGGQHVNTTE--SAVRIVHIPTGVTATCQNE-RSQHQNKASAMAVL 189 + FR G AGG+ + E +A + HIPTGV A + E R+ +Q S L Sbjct 381 DHFRQGRAGGEPITWQEFIAAFKKTHIPTGVVALKKREFRALNQGSRSVTEYL 433 >gi|116309038|emb|CAH66151.1| OSIGBa0097I11.3 [Oryza sativa (indica cultivar-group)] Length=1477 Score = 31.2 bits (69), Expect = 2.5 Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 3/53 (5%) Frame = +1 Query 40 ERFRAGGAGGQHVNTTE--SAVRIVHIPTGVTATCQNE-RSQHQNKASAMAVL 189 + FR G AGG+ + E +A + HIPTGV A + E R+ +Q S L Sbjct 331 DHFRQGRAGGEPITWQEFIAAFKKTHIPTGVVALKKREFRALNQGSRSVTEYL 383 >gi|116309187|emb|CAH66283.1| OSIGBa0116O04.5 [Oryza sativa (indica cultivar-group)] Length=1477 Score = 31.2 bits (69), Expect = 2.5 Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 3/53 (5%) Frame = +1 Query 40 ERFRAGGAGGQHVNTTE--SAVRIVHIPTGVTATCQNE-RSQHQNKASAMAVL 189 + FR G AGG+ + E +A + HIPTGV A + E R+ +Q S L Sbjct 331 DHFRQGRAGGEPITWQEFIAAFKKTHIPTGVVALKKREFRALNQGSRSVTEYL 383 >gi|116309037|emb|CAH66150.1| OSIGBa0097I11.2 [Oryza sativa (indica cultivar-group)] Length=1527 Score = 31.2 bits (69), Expect = 2.5 Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 3/53 (5%) Frame = +1 Query 40 ERFRAGGAGGQHVNTTE--SAVRIVHIPTGVTATCQNE-RSQHQNKASAMAVL 189 + FR G AGG+ + E +A + HIPTGV A + E R+ +Q S L Sbjct 381 DHFRQGRAGGEPITWQEFIAAFKKTHIPTGVVALKKREFRALNQGSRSVTEYL 433 >gi|110288688|gb|ABB46921.2| retrotransposon protein, putative, Ty3-gypsy subclass, expressed [Oryza sativa (japonica cultivar-group)] Length=1068 Score = 31.2 bits (69), Expect = 2.5 Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 3/53 (5%) Frame = +1 Query 40 ERFRAGGAGGQHVNTTE--SAVRIVHIPTGVTATCQNE-RSQHQNKASAMAVL 189 + FR G AGG+ + E +A + HIPTGV A + E R+ +Q S L Sbjct 347 DHFRQGRAGGEPITWQEFTAAFKKTHIPTGVVALKKREFRALNQGSRSVTEYL 399 >gi|108708194|gb|ABF95989.1| retrotransposon protein, putative, Ty3-gypsy subclass, expressed [Oryza sativa (japonica cultivar-group)] Length=1305 Score = 31.2 bits (69), Expect = 2.5 Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 3/53 (5%) Frame = +1 Query 40 ERFRAGGAGGQHVNTTE--SAVRIVHIPTGVTATCQNE-RSQHQNKASAMAVL 189 + FR G AGG+ + E +A + HIPTGV A + E R+ +Q S L Sbjct 81 DHFRQGRAGGEPITWQEFTAAFKKTHIPTGVVALKKREFRALNQGSRSVTEYL 133 >gi|90265093|emb|CAH67706.1| H0512B01.1 [Oryza sativa (indica cultivar-group)] Length=1454 Score = 31.2 bits (69), Expect = 2.5 Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 3/53 (5%) Frame = +1 Query 40 ERFRAGGAGGQHVNTTE--SAVRIVHIPTGVTATCQNE-RSQHQNKASAMAVL 189 + FR G AGG+ + E +A + HIPTGV A + E R+ +Q S L Sbjct 121 DHFRQGRAGGEPITWQEFTAAFKKTHIPTGVVALKKREFRALNQGSRSVTEYL 173 >gi|38347272|emb|CAE05319.2| Gene info OSJNBa0056L23.17 [Oryza sativa (japonica cultivar-group)] Length=963 Score = 31.2 bits (69), Expect = 2.5 Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 3/53 (5%) Frame = +1 Query 40 ERFRAGGAGGQHVNTTE--SAVRIVHIPTGVTATCQNE-RSQHQNKASAMAVL 189 + FR G AGG+ + E +A + HIPTGV A + E R+ +Q S L Sbjct 285 DHFRQGRAGGEPITWQEFTTAFKKTHIPTGVVALKKREFRALNQGSRSVTEYL 337 >gi|19881768|gb|AAM01169.1|AC113336_21 Gene info Putative retroelement [Oryza sativa (japonica cultivar-group)] Length=1449 Score = 31.2 bits (69), Expect = 2.5 Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 3/53 (5%) Frame = +1 Query 40 ERFRAGGAGGQHVNTTE--SAVRIVHIPTGVTATCQNE-RSQHQNKASAMAVL 189 + FR G AGG+ + E +A + HIPTGV A + E R+ +Q S L Sbjct 89 DHFRQGRAGGEPITWQEFTAAFKKTHIPTGVVALKKREFRALNQGSRSVTEYL 141 >gi|116309702|emb|CAH66749.1| H0409D10.7 [Oryza sativa (indica cultivar-group)] Length=1641 Score = 30.8 bits (68), Expect = 3.2 Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 3/53 (5%) Frame = +1 Query 40 ERFRAGGAGGQHVNTTE--SAVRIVHIPTGVTATCQNE-RSQHQNKASAMAVL 189 + FR G GG+ + E +A R HIPTGV A + E R+ +Q S L Sbjct 343 DHFRQGRVGGEPITWQEFTAAFRKTHIPTGVVALKKREFRALNQGSRSVTEYL 395 >gi|108705933|gb|ABF93728.1| retrotransposon protein, putative, unclassified [Oryza sativa (japonica cultivar-group)] Length=727 Score = 30.4 bits (67), Expect = 4.2 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 0/41 (0%) Frame = +3 Query 201 RPA*DGSSGTDERSAYTISYRDKLGQPDTYLRSSSLSNGEG 323 R + GS G RS +S D +GQPD+ R LS+ EG Sbjct 314 RQSGQGSGGPRIRSETQLSASDPIGQPDSRKRKLVLSDDEG 354
  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 15, 2007  4:53 AM
  Number of letters in database: 101,054,579
  Number of sequences in database:  283,349
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283349
Number of Hits to DB: 417
Number of extensions: 8
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 548
Length of database: 101054579
Length adjustment: 106
Effective length of query: 442
Effective length of database: 71019585
Effective search space: 5397488460
Effective search space used: 5397488460
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 64 (29.3 bits)