Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168931694-6747-5907223343.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig67 Length=772
Related Structures Score E Sequences producing significant alignments: (Bits) Value gi|119367477|gb|ABL67654.1| putative H-type thioredoxin [Citrus 221 2e-57 gi|11135282|sp|Q43636|TRXH_RICCO Thioredoxin H-type (TRX-H) >... 217 3e-56 gi|55670844|pdb|1XFL|A Chain A, Solution Structure Of Thiored... 208 2e-53 gi|15230385|ref|NP_190672.1| ATTRX1; thiol-disulfide exchange... 207 3e-53 gi|586099|sp|Q07090|TRXH2_TOBAC Thioredoxin H-type 2 (TRX-H2)... 200 4e-51 gi|80973754|gb|ABB53600.1| thioredoxin h [Eucalyptus grandis] 198 2e-50 gi|16588843|gb|AAL26915.1|AF323593_1 thioredoxin H [Prunus persi 191 2e-48 gi|13624884|emb|CAC36986.1| thioredoxin h [Pisum sativum] 190 5e-48 gi|71534922|gb|AAZ32865.1| thioredoxin h [Medicago sativa] 190 5e-48 gi|74058512|gb|AAZ98842.1| thioredoxin h1 [Medicago truncatula] 190 6e-48 gi|74058514|gb|AAZ98843.1| thioredoxin h2 [Medicago truncatula] 187 3e-47 gi|267124|sp|P29449|TRXH1_TOBAC Thioredoxin H-type 1 (TRX-H1)... 184 3e-46 gi|27466894|gb|AAO12854.1| thioredoxin h [Pisum sativum] 178 2e-44 gi|89258107|gb|ABD65296.1| thioredoxin [Solanum berthaultii] 176 7e-44 gi|30575686|gb|AAP33009.1| thioredoxin H [Citrus x paradisi] 173 8e-43 gi|40287476|gb|AAR83852.1| thioredoxin [Capsicum annuum] 171 4e-42 gi|119367472|gb|ABL67652.1| putative thioredoxin H protein [Citr 170 5e-42 gi|33621084|gb|AAQ23135.1| thioredoxin H3 [Ipomoea batatas] 170 5e-42 gi|14485509|emb|CAC42084.1| thioredoxin h [Pisum sativum] 169 1e-41 gi|19851972|gb|AAL99941.1| thioredoxin H [Populus tremula x Popu 168 2e-41 gi|58176806|pdb|1TI3|A Chain A, Solution Structure Of The Thi... 168 2e-41 gi|82407383|pdb|1WMJ|A Chain A, Solution Structure Of Thiored... 160 4e-39 gi|115470941|ref|NP_001059069.1| Os07g0186000 [Oryza sativa (... 160 4e-39 gi|1388084|gb|AAC49356.1| thioredoxin h 159 1e-38 gi|15219537|ref|NP_175128.1| ATTRX5; thiol-disulfide exchange... 159 1e-38 gi|53748515|emb|CAH59450.1| thioredoxin 1 [Plantago major] 158 3e-38 gi|33621082|gb|AAQ23134.1| thioredoxin H1 [Ipomoea batatas] 156 7e-38 gi|11135312|sp|Q96419|TRXH_FAGES Thioredoxin H-type (TRX-H) >... 155 2e-37 gi|11135132|sp|O65049|TRXH_PICMA Thioredoxin H-type (TRX-H) >... 154 4e-37 gi|11135265|sp|Q39362|TRXH2_BRANA Thioredoxin H-type 2 (TRX-H... 154 5e-37 gi|15223645|ref|NP_173403.1| ATTRX4; thiol-disulfide exchange... 152 1e-36 gi|992960|emb|CAA84610.1| thioredoxin [Arabidopsis thaliana] 151 2e-36 gi|21617968|gb|AAM67018.1| thioredoxin [Arabidopsis thaliana] 150 7e-36 gi|27461140|gb|AAL67139.1| thioredoxin H [Triticum aestivum] 149 9e-36 gi|32186040|gb|AAP72290.1| thioredoxin h isoform 1; HvTrxh1 [... 148 3e-35 gi|1388082|gb|AAC49355.1| thioredoxin h 146 8e-35 gi|15239136|ref|NP_199112.1| ATTRX3; thiol-disulfide exchange... 146 8e-35 gi|32186042|gb|AAP72291.1| thioredoxin h isoform 2; HvTrxh2 [... 146 1e-34 gi|115464793|ref|NP_001055996.1| Os05g0508500 [Oryza sativa (... 145 1e-34 gi|12082335|dbj|BAB20886.1| thioredoxin h [Oryza sativa (japonic 145 1e-34 gi|66841002|emb|CAI64400.1| thioredoxin h1 protein [Zea mays] 144 3e-34 gi|8980491|emb|CAB96931.1| thioredoxin h [Triticum aestivum] ... 143 6e-34 gi|16517113|gb|AAL24517.1|AF420472_1 thioredoxin H [Triticum ... 143 8e-34 gi|11135126|sp|O64394|TRXH_WHEAT Thioredoxin H-type (TRX-H) (... 142 1e-33 gi|25405885|pir||G96509 protein F27F5.21 [imported] - Arabido... 142 1e-33 gi|119390311|pdb|2IWT|A Chain A, Thioredoxin H2 (Hvtrxh2) In ... 142 1e-33 gi|66841004|emb|CAI64401.1| thioredoxin h2 protein [Zea mays] 138 3e-32 gi|11494247|gb|AAG35777.1|AF273844_1 thioredoxin-h-like prote... 135 1e-31 gi|11135129|sp|O64432|TRXH_BRARA Thioredoxin H-type (TRX-H) >... 135 1e-31 gi|57014139|sp|P68176|TRXH_BRAOL Thioredoxin H-type (TRX-H) (... 135 1e-31 gi|53748519|emb|CAH59452.1| thioredoxin 3 [Plantago major] 124 3e-28 gi|115455973|ref|NP_001051587.1| Os03g0800700 [Oryza sativa (... 121 3e-27 gi|115479053|ref|NP_001063120.1| Os09g0401200 [Oryza sativa (... 120 8e-27 gi|66096352|gb|AAY42864.1| thioredoxin H [Nicotiana alata] 118 2e-26 gi|46326970|gb|AAS88427.1| thioredoxin [Glycine max] 118 2e-26 gi|24637231|gb|AAN63619.1|AF435818_1 thioredoxin h-like protein 117 4e-26 gi|32815907|gb|AAP88338.1| At3g17880 [Arabidopsis thaliana] 117 6e-26 gi|30684711|ref|NP_188415.2| ATTDX (TETRATICOPEPTIDE DOMAIN-C... 117 6e-26 gi|115470983|ref|NP_001059090.1| Os07g0190800 [Oryza sativa (... 116 8e-26 gi|21536657|gb|AAM60989.1| tetratricoredoxin [Arabidopsis thalia 115 2e-25 gi|27543511|gb|AAO16555.1| thioredoxin h [Leymus chinensis] 115 2e-25 gi|33621080|gb|AAQ23133.1| thioredoxin H2 [Ipomoea batatas] 114 3e-25 gi|24637225|gb|AAN63616.1|AF435815_1 thioredoxin h-like protein 114 3e-25 gi|5732703|gb|AAD49232.1|AF159387_1 thioredoxin-like protein [Lo 114 5e-25 gi|23978434|dbj|BAC21264.1| thioredoxin h [Cucurbita maxima] 113 7e-25 gi|5732705|gb|AAD49233.1|AF159388_1 thioredoxin-like protein ... 113 9e-25 gi|1086147|pir||S49353 protein S2 - Phalaris coerulescens 113 9e-25 gi|1085952|pir||S49352 protein S1 - Phalaris coerulescens 113 9e-25 gi|5732699|gb|AAD49230.1|AF159385_1 thioredoxin-like protein [Ho 112 1e-24 gi|14581677|gb|AAK64512.1| Hsp70 interacting protein/thioredoxin 112 2e-24 gi|5732701|gb|AAD49231.1|AF159386_1 thioredoxin-like protein [Se 112 2e-24 gi|27466896|gb|AAO12855.1| thioredoxin h [Pisum sativum] 111 3e-24 gi|115434738|ref|NP_001042127.1| Os01g0168200 [Oryza sativa (... 111 3e-24 gi|115462317|ref|NP_001054758.1| Os05g0169000 [Oryza sativa (... 111 4e-24 gi|5932426|gb|AAD56954.1|AF186240_1 thioredoxin-like protein [Se 111 4e-24 gi|24637229|gb|AAN63618.1|AF435817_1 thioredoxin h-like protein 111 4e-24 gi|24637237|gb|AAN63622.1|AF438359_1 thioredoxin [Triticum aesti 111 4e-24 gi|24637227|gb|AAN63617.1|AF435816_1 thioredoxin h-like protein 111 4e-24 gi|9294492|dbj|BAB02711.1| thioredoxin-like protein [Arabidopsis 110 6e-24 gi|19548654|gb|AAL90749.1| thioredoxin H [Populus tremula x Popu 110 8e-24 gi|15231958|ref|NP_187483.1| electron transporter/ thiol-disu... 110 8e-24 gi|53801490|gb|AAU93947.1| thioredoxin H [Helicosporidium sp. ex 109 1e-23 gi|18041548|gb|AAL54858.1| tetratricoredoxin [Nicotiana tabacum] 109 1e-23 gi|25990392|gb|AAN76509.1|AF352030_1 thioredoxin h [Brassica rap 109 1e-23 gi|21595244|gb|AAM66084.1| thioredoxin [Arabidopsis thaliana] 108 2e-23 gi|1388078|gb|AAC49353.1| thioredoxin h 108 2e-23 gi|15242525|ref|NP_198811.1| ATTRX2; thiol-disulfide exchange... 108 2e-23 gi|121483549|gb|ABM54166.1| thioredoxin [Brassica juncea] 106 9e-23 gi|1729934|sp|P80028|TRXH_CHLRE Thioredoxin H-type (TRX-H) (T... 101 4e-21 gi|1942873|pdb|1TOF| Chain , Thioredoxin H (Oxidized Form),... 101 4e-21 gi|17943429|pdb|1EP8|A Chain A, Crystal Structure Of A Mutate... 98.2 3e-20 gi|4928460|gb|AAD33596.1|AF133127_1 thioredoxin h [Hevea brasili 95.9 2e-19 gi|115464505|ref|NP_001055852.1| Os05g0480200 [Oryza sativa (... 94.7 3e-19 gi|15218902|ref|NP_176182.1| electron transporter/ thiol-disu... 93.6 8e-19 gi|116055809|emb|CAL57894.1| Thioredoxin (ISS) [Ostreococcus tau 92.8 1e-18 gi|15222488|ref|NP_177146.1| electron transporter/ thiol-disu... 92.8 1e-18 gi|15220418|ref|NP_172620.1| electron transporter/ thiol-disu... 92.0 2e-18 gi|27763681|gb|AAO20258.1| cytosolic thioredoxin h2 [Chlamydomon 91.3 4e-18 gi|30688406|ref|NP_181611.2| electron transporter [Arabidopsi... 91.3 4e-18 gi|5006623|gb|AAD37583.1|AF144392_1 thioredoxin-like 4 [Arabidop 90.5 6e-18
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 477 Number of extensions: 2 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 772 Length of database: 101054579 Length adjustment: 111 Effective length of query: 661 Effective length of database: 69602840 Effective search space: 10162014640 Effective search space used: 10162014640 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 66 (30.0 bits)