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BLASTX 2.2.15 [Oct-15-2006] 
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman 
(1997), "Gapped BLAST and PSI-BLAST: a new generation of 
protein database search programs", Nucleic Acids Res. 25:3389-3402.

RID: 1168931719-8387-70384782968.BLASTQ1


Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
           4,458,890 sequences; 1,532,996,420 total letters

 
If you have any problems or questions with the results of this search 
please refer to the BLAST FAQs
Taxonomy reports

Query=  Contig68
Length=635

Distribution of 32 Blast Hits on the Query Sequence


                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|3421123|gb|AAC32074.1|  20S proteasome beta subunit PBG1 [Arab   133    5e-44 UniGene info
gi|15223537|ref|NP_176040.1|  PBG1; endopeptidase/ peptidase/ ...   132    6e-44 UniGene infoGene info
gi|115480143|ref|NP_001063665.1|  Os09g0515200 [Oryza sativa (...   119    9e-39 Gene info
gi|92888792|gb|ABE89546.1|  Peptidase T1A, proteasome beta-subuni   132    1e-30
gi|52548242|gb|AAU82108.1|  20S proteasome beta 7 subunit [Tritic   115    1e-25 UniGene infoGene info
gi|116057860|emb|CAL54063.1|  20S proteasome, regulatory subun...  69.3    9e-16
gi|14594935|emb|CAC43328.1|  putative beta7 proteasome subunit [N  73.9    4e-13 UniGene info
gi|116054672|emb|CAL56749.1|  20S proteasome, regulatory subun...  38.1    0.027
gi|92868982|gb|ABE78927.1|  Peptidase T1A, proteasome beta-subuni  34.3    0.39 
gi|15231544|ref|NP_189265.1|  endopeptidase/ threonine endopep...  34.3    0.39  UniGene infoGene info
gi|119638448|gb|ABL85039.1|  proteasome [Brachypodium sylvaticum]  33.9    0.51 
gi|20260224|gb|AAM13010.1|  20S proteasome beta subunit PBB2 [...  33.9    0.51  UniGene info
gi|2511578|emb|CAA73621.1|  multicatalytic endopeptidase [Arabido  33.9    0.51  UniGene info
gi|15292875|gb|AAK92808.1|  putative proteasome epsilon chain ...  33.9    0.51  UniGene info
gi|21593337|gb|AAM65286.1|  20S proteasome beta subunit PBB2 [Ara  33.9    0.51  UniGene info
gi|30688785|ref|NP_850641.1|  PBB1; endopeptidase/ peptidase/ ...  33.9    0.51  UniGene infoGene info
gi|15237451|ref|NP_198874.1|  PBB2; endopeptidase/ peptidase/ ...  33.9    0.51  UniGene infoGene info
gi|15222152|ref|NP_172765.1|  PBE1; endopeptidase/ peptidase/ ...  33.9    0.51  UniGene infoGene info
gi|18405364|ref|NP_566818.1|  PBB1; endopeptidase/ peptidase/ ...  33.9    0.51  UniGene infoGene info
gi|66271071|gb|AAY43812.1|  beta1 proteasome-1D [Aegilops tauschi  33.5    0.66 
gi|50660436|gb|AAT80906.1|  26S proteasome beta subunit [Lemna mi  33.1    0.87 
gi|3914430|sp|O24361|PSB5_SPIOL  Proteasome subunit beta type ...  33.1    0.87 
gi|66271073|gb|AAY43813.1|  beta1 proteasome-7D [Aegilops taus...  32.7    1.1  
gi|48431271|gb|AAT44125.1|  20S proteasome beta subunit E [Saussu  32.3    1.5  
gi|14594921|emb|CAC43321.1|  putative beta proteasome subunit [Ni  32.3    1.5   UniGene info
gi|115462469|ref|NP_001054834.1|  Os05g0187000 [Oryza sativa (...  32.3    1.5   Gene info
gi|115466298|ref|NP_001056748.1|  Os06g0139900 [Oryza sativa (...  30.8    4.3   Gene info
gi|115448935|ref|NP_001048247.1|  Os02g0770000 [Oryza sativa (...  30.0    7.3   Gene info
Alignments

>gi|3421123|gb|AAC32074.1| UniGene info 20S proteasome beta subunit PBG1 [Arabidopsis thaliana]
Length=246

 Score =  133 bits (334),  Expect(2) = 5e-44
 Identities = 63/73 (86%), Positives = 71/73 (97%), Gaps = 0/73 (0%)
 Frame = +1

Query  103  ESDSQRTLYPYVTGTSVVALKYKDGILMAADMGGSYGSTLRYKSVERMKPIGKHSLLGAS  282
            E +SQRTLYPYVTGTSVVA+KYKDG+LMA+DMGGSYGSTLRYK++ER+K IGKHSLLGAS
Sbjct  18   EEESQRTLYPYVTGTSVVAIKYKDGVLMASDMGGSYGSTLRYKNIERVKAIGKHSLLGAS  77

Query  283  GEISDFQEILRFL  321
            GEISDFQEILR+L
Sbjct  78   GEISDFQEILRYL  90


 Score = 65.1 bits (157),  Expect(2) = 5e-44
 Identities = 27/34 (79%), Positives = 30/34 (88%), Gaps = 0/34 (0%)
 Frame = +2

Query  317  FFDELILYDNMWDDGNSLGPKEVHNYLTPVMYNK  418
            + DEL L DNMWDDGNSLGPKE+HNYLT VMYN+
Sbjct  89   YLDELTLNDNMWDDGNSLGPKEIHNYLTRVMYNR  122


>gi|15223537|ref|NP_176040.1| UniGene infoGene info PBG1; endopeptidase/ peptidase/ threonine endopeptidase [Arabidopsis 
thaliana]
 gi|82581521|sp|Q7DLR9|PSB4_ARATH Gene info Proteasome subunit beta type 4 precursor (Proteasome subunit 
beta type 7) (20S proteasome beta subunit G-1) (Proteasome component 
H)
 gi|12323023|gb|AAG51500.1|AC058785_3 Gene info 20S proteasome beta subunit (PBG1) [Arabidopsis thaliana]
 gi|14190405|gb|AAK55683.1|AF378880_1 UniGene infoGene info At1g56450/F13N6_3 [Arabidopsis thaliana]
 gi|15010590|gb|AAK73954.1| UniGene infoGene info At1g56450/F13N6_3 [Arabidopsis thaliana]
 gi|15450551|gb|AAK96453.1| UniGene infoGene info At1g56450/F13N6_3 [Arabidopsis thaliana]
 gi|62320870|dbj|BAD93840.1| UniGene infoGene info putative protein [Arabidopsis thaliana]
Length=246

 Score =  132 bits (333),  Expect(2) = 6e-44
 Identities = 62/73 (84%), Positives = 71/73 (97%), Gaps = 0/73 (0%)
 Frame = +1

Query  103  ESDSQRTLYPYVTGTSVVALKYKDGILMAADMGGSYGSTLRYKSVERMKPIGKHSLLGAS  282
            E +SQRTLYPYVTGTS+VA+KYKDG+LMA+DMGGSYGSTLRYK++ER+K IGKHSLLGAS
Sbjct  18   EEESQRTLYPYVTGTSIVAIKYKDGVLMASDMGGSYGSTLRYKNIERVKAIGKHSLLGAS  77

Query  283  GEISDFQEILRFL  321
            GEISDFQEILR+L
Sbjct  78   GEISDFQEILRYL  90


 Score = 65.1 bits (157),  Expect(2) = 6e-44
 Identities = 27/34 (79%), Positives = 30/34 (88%), Gaps = 0/34 (0%)
 Frame = +2

Query  317  FFDELILYDNMWDDGNSLGPKEVHNYLTPVMYNK  418
            + DEL L DNMWDDGNSLGPKE+HNYLT VMYN+
Sbjct  89   YLDELTLNDNMWDDGNSLGPKEIHNYLTRVMYNR  122


>gi|115480143|ref|NP_001063665.1| Gene info Os09g0515200 [Oryza sativa (japonica cultivar-group)]
 gi|8671512|dbj|BAA96839.1| UniGene infoGene info beta 7 subunit of 20S proteasome [Oryza sativa (japonica cultivar-group)]
 gi|50725360|dbj|BAD34432.1| Gene info beta 7 subunit of 20S proteasome [Oryza sativa (japonica cultivar-group)]
 gi|113631898|dbj|BAF25579.1| Gene info Os09g0515200 [Oryza sativa (japonica cultivar-group)]
Length=256

 Score =  119 bits (297),  Expect(2) = 9e-39
 Identities = 54/70 (77%), Positives = 65/70 (92%), Gaps = 0/70 (0%)
 Frame = +1

Query  112  SQRTLYPYVTGTSVVALKYKDGILMAADMGGSYGSTLRYKSVERMKPIGKHSLLGASGEI  291
            +QRT YPYVTG+S++ALKYKDG++MA+D G SYGSTLRYKSVER+K +GKHSL+GASGE 
Sbjct  27   TQRTQYPYVTGSSIIALKYKDGVIMASDTGASYGSTLRYKSVERIKAVGKHSLIGASGEF  86

Query  292  SDFQEILRFL  321
            SDFQEILR+L
Sbjct  87   SDFQEILRYL  96


 Score = 61.6 bits (148),  Expect(2) = 9e-39
 Identities = 26/34 (76%), Positives = 30/34 (88%), Gaps = 0/34 (0%)
 Frame = +2

Query  317  FFDELILYDNMWDDGNSLGPKEVHNYLTPVMYNK  418
            + DEL L D+MWDDGNSLGPKEVH+YLT VMYN+
Sbjct  95   YLDELTLSDHMWDDGNSLGPKEVHSYLTRVMYNR  128


>gi|92888792|gb|ABE89546.1|  Peptidase T1A, proteasome beta-subunit [Medicago truncatula]
Length=231

 Score =  132 bits (332),  Expect = 1e-30
 Identities = 76/129 (58%), Positives = 92/129 (71%), Gaps = 2/129 (1%)
 Frame = +1

Query  106  SDSQRTLYPYVTGTSVVALKYKDGILMAADMGGSYGSTLRYKSVERMKPIGKHSLLGASG  285
            ++SQRTLYPYVTG+SVVA+KYKDGILMA+DMGGSYGSTLRYKSVER+KPIGKHSL+GASG
Sbjct  5    AESQRTLYPYVTGSSVVAIKYKDGILMASDMGGSYGSTLRYKSVERVKPIGKHSLIGASG  64

Query  286  EISDFQEILRFL**AYLV*QYVG*WQLFGAERGAQLFDSSHV*QGXNKVNPIAETPLYLV  465
            EISDFQEI R+L    L           G +     + +  +    NK NP+  + L L 
Sbjct  65   EISDFQEIQRYLDELILTDNMWDDGNSLGPKE-VHNYLTRVMYNRRNKFNPLWNS-LVLG  122

Query  466  GVKNGTEXI  492
            GVKNG + +
Sbjct  123  GVKNGQKYL  131


>gi|52548242|gb|AAU82108.1| UniGene infoGene info 20S proteasome beta 7 subunit [Triticum aestivum]
Length=215

 Score =  115 bits (288),  Expect = 1e-25
 Identities = 54/75 (72%), Positives = 63/75 (84%), Gaps = 0/75 (0%)
 Frame = +1

Query  97   GPESDSQRTLYPYVTGTSVVALKYKDGILMAADMGGSYGSTLRYKSVERMKPIGKHSLLG  276
            G    +QRTL PYVTG SV+A+KYKDG++MA D G SYGSTLRYKSVER+K +GKHSL+G
Sbjct  9    GGGDGTQRTLNPYVTGNSVIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIG  68

Query  277  ASGEISDFQEILRFL  321
             SGE SDFQEILR+L
Sbjct  69   GSGEFSDFQEILRYL  83


>gi|116057860|emb|CAL54063.1|  20S proteasome, regulatory subunit beta type PSMB6/PSMB9/PRE3 
(ISS) [Ostreococcus tauri]
Length=289

 Score = 69.3 bits (168),  Expect(2) = 9e-16
 Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 0/73 (0%)
 Frame = +1

Query  103  ESDSQRTLYPYVTGTSVVALKYKDGILMAADMGGSYGSTLRYKSVERMKPIGKHSLLGAS  282
            ++ + RT  PYVTGTS + LKY  G+L+A D    YGST RYKSVER+K +     +  +
Sbjct  60   KAPATRTQTPYVTGTSALGLKYAGGVLLATDTLACYGSTKRYKSVERVKRVNDKCAIAFT  119

Query  283  GEISDFQEILRFL  321
            GE+SDF  +   L
Sbjct  120  GELSDFAYVCDLL  132


 Score = 33.9 bits (76),  Expect(2) = 9e-16
 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 0/36 (0%)
 Frame = +2

Query  311  CVFFDELILYDNMWDDGNSLGPKEVHNYLTPVMYNK  418
            C   +EL   D   DDG +   +E++ YLT VMYN+
Sbjct  129  CDLLEELTTEDFCEDDGTTRDAEEIYQYLTRVMYNR  164


>gi|14594935|emb|CAC43328.1| UniGene info putative beta7 proteasome subunit [Nicotiana tabacum]
Length=129

 Score = 73.9 bits (180),  Expect = 4e-13
 Identities = 49/100 (49%), Positives = 61/100 (61%), Gaps = 6/100 (6%)
 Frame = +1

Query  199  GGSYGSTLRYKSVERMKPIGKHSLLGASGEISDFQEILRFL**AYLV*QYVG*WQLFGA-  375
            GGSYGST+RYKSVER+K +GKHSLLGASGEISDFQEI R L    L   Y   W    + 
Sbjct  1    GGSYGSTIRYKSVERLKSVGKHSLLGASGEISDFQEISRKLDELIL---YDNMWDDGNSL  57

Query  376  -ERGAQLFDSSHV*QGXNKVNPIAETPLYLVGVKNGTEXI  492
              +    + +  +    NK NP+  + L L GVKNG + +
Sbjct  58   GPKEVHNYLTRMMYNRRNKFNPLWNS-LVLGGVKNGQKYL  96


>gi|116054672|emb|CAL56749.1|  20S proteasome, regulatory subunit beta type PSMB5/PSMB8/PRE2 
(ISS) [Ostreococcus tauri]
Length=265

 Score = 38.1 bits (87),  Expect = 0.027
 Identities = 16/59 (27%), Positives = 37/59 (62%), Gaps = 0/59 (0%)
 Frame = +1

Query  145  TSVVALKYKDGILMAADMGGSYGSTLRYKSVERMKPIGKHSLLGASGEISDFQEILRFL  321
            T+++A+KY DG+++ AD   S G+ +  ++ +++ PI ++  +  SG  +D Q +  ++
Sbjct  50   TTIMAVKYADGVVLGADSRTSTGTYVANRASDKITPICENVWMCRSGSAADTQNVAAYV  108


>gi|92868982|gb|ABE78927.1|  Peptidase T1A, proteasome beta-subunit [Medicago truncatula]
Length=271

 Score = 34.3 bits (77),  Expect = 0.39
 Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 0/54 (0%)
 Frame = +1

Query  142  GTSVVALKYKDGILMAADMGGSYGSTLRYKSVERMKPIGKHSLLGASGEISDFQ  303
            GT+ +A  +K+G+++AAD   S G  +  +SV+++  I  + L   +G  +D Q
Sbjct  54   GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQ  107


>gi|15231544|ref|NP_189265.1| UniGene infoGene info endopeptidase/ threonine endopeptidase [Arabidopsis thaliana]
 gi|75273433|sp|Q9LIP2|PSB5B_ARATH Gene info Proteasome subunit beta type 5-B precursor (20S proteasome beta 
subunit E-2) (Proteasome epsilon-2 chain)
 gi|16612308|gb|AAL27514.1|AF439846_1 UniGene infoGene info AT3g26340/F20C19_6 [Arabidopsis thaliana]
 gi|9294292|dbj|BAB02194.1| Gene info proteasome epsilon chain precursor [Arabidopsis thaliana]
 gi|21553804|gb|AAM62897.1| UniGene infoGene info 26S proteasome beta subunit, putative [Arabidopsis thaliana]
 gi|21928101|gb|AAM78079.1| UniGene infoGene info AT3g26340/F20C19_6 [Arabidopsis thaliana]
Length=273

 Score = 34.3 bits (77),  Expect = 0.39
 Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 0/54 (0%)
 Frame = +1

Query  142  GTSVVALKYKDGILMAADMGGSYGSTLRYKSVERMKPIGKHSLLGASGEISDFQ  303
            GT+ +A  +K+G+++AAD   S G  +  +SV+++  I  + L   +G  +D Q
Sbjct  57   GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQ  110


>gi|119638448|gb|ABL85039.1|  proteasome [Brachypodium sylvaticum]
Length=242

 Score = 33.9 bits (76),  Expect = 0.51
 Identities = 20/76 (26%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
 Frame = +1

Query  82   ESGLLGPESDSQRTLYPYVTGTSVVALKYKDGILMAADMGGSYGSTLRYKSVERMKPIGK  261
            ++G +G  SD+  T   +  GT++V + Y  G+++AAD   S G  +  ++ +++  +  
Sbjct  2    DAGTMGSASDAPTT-GEHRMGTTIVGVCYDGGVVLAADSRTSTGMYVANRASDKISQLTD  60

Query  262  HSLLGASGEISDFQEI  309
            +  +  SG  +D Q I
Sbjct  61   NVYVCRSGSAADTQVI  76


>gi|20260224|gb|AAM13010.1| UniGene info 20S proteasome beta subunit PBB2 [Arabidopsis thaliana]
 gi|21387013|gb|AAM47910.1| UniGene info 20S proteasome beta subunit PBB2 [Arabidopsis thaliana]
Length=274

 Score = 33.9 bits (76),  Expect = 0.51
 Identities = 15/57 (26%), Positives = 32/57 (56%), Gaps = 0/57 (0%)
 Frame = +1

Query  139  TGTSVVALKYKDGILMAADMGGSYGSTLRYKSVERMKPIGKHSLLGASGEISDFQEI  309
            TGT++V L +KDG+++ AD   + G  +  K+ E++  +  +     +G  +D + +
Sbjct  38   TGTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAV  94


>gi|2511578|emb|CAA73621.1| UniGene info multicatalytic endopeptidase [Arabidopsis thaliana]
Length=273

 Score = 33.9 bits (76),  Expect = 0.51
 Identities = 15/57 (26%), Positives = 32/57 (56%), Gaps = 0/57 (0%)
 Frame = +1

Query  139  TGTSVVALKYKDGILMAADMGGSYGSTLRYKSVERMKPIGKHSLLGASGEISDFQEI  309
            TGT++V L +KDG+++ AD   + G  +  K+ E++  +  +     +G  +D + +
Sbjct  38   TGTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAV  94


>gi|15292875|gb|AAK92808.1| UniGene info putative proteasome epsilon chain precursor [Arabidopsis thaliana]
Length=274

 Score = 33.9 bits (76),  Expect = 0.51
 Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 0/62 (0%)
 Frame = +1

Query  118  RTLYPYVTGTSVVALKYKDGILMAADMGGSYGSTLRYKSVERMKPIGKHSLLGASGEISD  297
            + +  +  GT+ +A  +K G+++AAD   S G  +  +SV+++  I  + L   +G  +D
Sbjct  49   KDMLKHAKGTTTLAFIFKGGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAAD  108

Query  298  FQ  303
             Q
Sbjct  109  CQ  110


>gi|21593337|gb|AAM65286.1| UniGene info 20S proteasome beta subunit PBB2 [Arabidopsis thaliana]
Length=274

 Score = 33.9 bits (76),  Expect = 0.51
 Identities = 15/57 (26%), Positives = 32/57 (56%), Gaps = 0/57 (0%)
 Frame = +1

Query  139  TGTSVVALKYKDGILMAADMGGSYGSTLRYKSVERMKPIGKHSLLGASGEISDFQEI  309
            TGT++V L +KDG+++ AD   + G  +  K+ E++  +  +     +G  +D + +
Sbjct  38   TGTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAV  94


>gi|30688785|ref|NP_850641.1| UniGene infoGene info PBB1; endopeptidase/ peptidase/ threonine endopeptidase [Arabidopsis 
thaliana]
Length=267

 Score = 33.9 bits (76),  Expect = 0.51
 Identities = 15/57 (26%), Positives = 32/57 (56%), Gaps = 0/57 (0%)
 Frame = +1

Query  139  TGTSVVALKYKDGILMAADMGGSYGSTLRYKSVERMKPIGKHSLLGASGEISDFQEI  309
            TGT++V L +KDG+++ AD   + G  +  K+ E++  +  +     +G  +D + +
Sbjct  38   TGTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAV  94


>gi|15237451|ref|NP_198874.1| UniGene infoGene info PBB2; endopeptidase/ peptidase/ threonine endopeptidase [Arabidopsis 
thaliana]
 gi|30693626|ref|NP_851108.1| UniGene infoGene info PBB2; endopeptidase/ peptidase/ threonine endopeptidase [Arabidopsis 
thaliana]
 gi|82581524|sp|Q7DLS1|PSB7B_ARATH Gene info Proteasome subunit beta type 7-B precursor (Proteasome subunit 
beta type 2) (20S proteasome beta subunit B-2) (Proteasome 
component FC)
 gi|3421104|gb|AAC32067.1| UniGene infoGene info 20S proteasome beta subunit PBB2 [Arabidopsis thaliana]
 gi|9758084|dbj|BAB08528.1| Gene info 20S proteasome beta subunit PBB2 [Arabidopsis thaliana]
Length=274

 Score = 33.9 bits (76),  Expect = 0.51
 Identities = 15/57 (26%), Positives = 32/57 (56%), Gaps = 0/57 (0%)
 Frame = +1

Query  139  TGTSVVALKYKDGILMAADMGGSYGSTLRYKSVERMKPIGKHSLLGASGEISDFQEI  309
            TGT++V L +KDG+++ AD   + G  +  K+ E++  +  +     +G  +D + +
Sbjct  38   TGTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAV  94


>gi|15222152|ref|NP_172765.1| UniGene infoGene info PBE1; endopeptidase/ peptidase/ threonine endopeptidase [Arabidopsis 
thaliana]
 gi|3914425|sp|O23717|PSB5A_ARATH Gene info Proteasome subunit beta type 5-A precursor (20S proteasome beta 
subunit E-1) (Proteasome epsilon-1 chain) (Proteasome component 
E)
 gi|4850389|gb|AAD31059.1|AC007357_8 Gene info Identical to gb|Y13695 multicatalytic endopeptidase complex, 
proteasome precursor, beta subunit (prce) from Arabidopsis thaliana. 
 ESTs gb|Y09360, gb|F13852, gb|T20555, gb|T44620, gb|AI099779 
and gb|AA586183 come from this gene
 gi|13194776|gb|AAK15550.1|AF348579_1 UniGene infoGene info putative proteasome epsilon chain precursor [Arabidopsis thaliana]
 gi|2511596|emb|CAA74029.1| UniGene infoGene info multicatalytic endopeptidase complex, proteasome precursor, beta 
subunit [Arabidopsis thaliana]
 gi|3421117|gb|AAC32072.1| UniGene infoGene info 20S proteasome beta subunit PBE1 [Arabidopsis thaliana]
 gi|23297641|gb|AAN12998.1| UniGene infoGene info proteasome epsilon chain precursor [Arabidopsis thaliana]
Length=274

 Score = 33.9 bits (76),  Expect = 0.51
 Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 0/62 (0%)
 Frame = +1

Query  118  RTLYPYVTGTSVVALKYKDGILMAADMGGSYGSTLRYKSVERMKPIGKHSLLGASGEISD  297
            + +  +  GT+ +A  +K G+++AAD   S G  +  +SV+++  I  + L   +G  +D
Sbjct  49   KDMLKHAKGTTTLAFIFKGGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAAD  108

Query  298  FQ  303
             Q
Sbjct  109  CQ  110


>gi|18405364|ref|NP_566818.1| UniGene infoGene info PBB1; endopeptidase/ peptidase/ threonine endopeptidase [Arabidopsis 
thaliana]
 gi|82581523|sp|O23710|PSB7A_ARATH Gene info Proteasome subunit beta type 7-A precursor (Proteasome subunit 
beta type 2) (20S proteasome beta subunit B-1) (Proteasome 
component FA) (Proteasome component FB)
 gi|3421102|gb|AAC32066.1| UniGene infoGene info 20S proteasome beta subunit PBB1 [Arabidopsis thaliana]
 gi|7939516|dbj|BAA95719.1| Gene info 20S proteasome beta subunit; multicatalytic endopeptidase [Arabidopsis 
thaliana]
 gi|21554360|gb|AAM63467.1| UniGene infoGene info 20S proteasome beta subunit PBB1 [Arabidopsis thaliana]
 gi|28058828|gb|AAO29958.1| UniGene infoGene info 20S proteasome beta subunit (PBB1) [Arabidopsis thaliana]
 gi|30023762|gb|AAP13414.1| UniGene infoGene info At3g27430 [Arabidopsis thaliana]
Length=273

 Score = 33.9 bits (76),  Expect = 0.51
 Identities = 15/57 (26%), Positives = 32/57 (56%), Gaps = 0/57 (0%)
 Frame = +1

Query  139  TGTSVVALKYKDGILMAADMGGSYGSTLRYKSVERMKPIGKHSLLGASGEISDFQEI  309
            TGT++V L +KDG+++ AD   + G  +  K+ E++  +  +     +G  +D + +
Sbjct  38   TGTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAV  94


>gi|66271071|gb|AAY43812.1|  beta1 proteasome-1D [Aegilops tauschii]
Length=244

 Score = 33.5 bits (75),  Expect = 0.66
 Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 0/75 (0%)
 Frame = +1

Query  85   SGLLGPESDSQRTLYPYVTGTSVVALKYKDGILMAADMGGSYGSTLRYKSVERMKPIGKH  264
            + L+GP S        +  GT++V + Y  G+++AAD   S G  +  ++ +++  +  +
Sbjct  4    ASLMGPSSADAAPDGEHRMGTTIVGVCYDGGVVLAADSRTSTGMYVANRASDKISQLTDN  63

Query  265  SLLGASGEISDFQEI  309
              +  SG  +D Q I
Sbjct  64   VYVCRSGSAADTQVI  78


>gi|50660436|gb|AAT80906.1|  26S proteasome beta subunit [Lemna minor]
Length=116

 Score = 33.1 bits (74),  Expect = 0.87
 Identities = 16/54 (29%), Positives = 32/54 (59%), Gaps = 0/54 (0%)
 Frame = +1

Query  142  GTSVVALKYKDGILMAADMGGSYGSTLRYKSVERMKPIGKHSLLGASGEISDFQ  303
            GT+ +A  +K+G++++AD   S G  +  +SV+++  I  + L   +G  +D Q
Sbjct  6    GTTTLAFIFKEGVIVSADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQ  59


>gi|3914430|sp|O24361|PSB5_SPIOL  Proteasome subunit beta type 5 precursor (20S proteasome subunit 
E) (Proteasome epsilon chain)
 gi|2285800|dbj|BAA21650.1|  26S proteasome beta subunit [Spinacia oleracea]
Length=272

 Score = 33.1 bits (74),  Expect = 0.87
 Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 0/54 (0%)
 Frame = +1

Query  142  GTSVVALKYKDGILMAADMGGSYGSTLRYKSVERMKPIGKHSLLGASGEISDFQ  303
            GT+ +A  +K G+++AAD   S G  +  +SV+++  I  + L   +G  +D Q
Sbjct  55   GTTTLAFIFKHGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQ  108


>gi|66271073|gb|AAY43813.1|  beta1 proteasome-7D [Aegilops tauschii]
 gi|66271075|gb|AAY43814.1|  beta1 proteasome-7D [Aegilops tauschii]
Length=246

 Score = 32.7 bits (73),  Expect = 1.1
 Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 0/71 (0%)
 Frame = +1

Query  97   GPESDSQRTLYPYVTGTSVVALKYKDGILMAADMGGSYGSTLRYKSVERMKPIGKHSLLG  276
            GP S    T   +  GT++V + Y  G+++AAD   S G  +  ++ +++  +  +  + 
Sbjct  10   GPSSADAPTDGEHRMGTTIVGVCYAGGVVLAADSRTSTGMYVANRASDKISQLTDNVYVC  69

Query  277  ASGEISDFQEI  309
             SG  +D Q I
Sbjct  70   RSGSAADTQVI  80


>gi|48431271|gb|AAT44125.1|  20S proteasome beta subunit E [Saussurea medusa]
Length=150

 Score = 32.3 bits (72),  Expect = 1.5
 Identities = 16/54 (29%), Positives = 32/54 (59%), Gaps = 0/54 (0%)
 Frame = +1

Query  142  GTSVVALKYKDGILMAADMGGSYGSTLRYKSVERMKPIGKHSLLGASGEISDFQ  303
            GT+ +A  +K+G+++AA+   S G  +  +SV+++  I  + L   +G  +D Q
Sbjct  56   GTTTLAFIFKEGVMVAANSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQ  109


>gi|14594921|emb|CAC43321.1| UniGene info putative beta proteasome subunit [Nicotiana tabacum]
Length=205

 Score = 32.3 bits (72),  Expect = 1.5
 Identities = 14/57 (24%), Positives = 32/57 (56%), Gaps = 0/57 (0%)
 Frame = +1

Query  139  TGTSVVALKYKDGILMAADMGGSYGSTLRYKSVERMKPIGKHSLLGASGEISDFQEI  309
            TGT++V L ++DG+++ AD   + G  +  K+ E++  +  +     +G  +D + +
Sbjct  39   TGTTIVGLIFQDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAV  95


>gi|115462469|ref|NP_001054834.1| Gene info Os05g0187000 [Oryza sativa (japonica cultivar-group)]
 gi|8671504|dbj|BAA96835.1| UniGene infoGene info beta 2 subunit of 20S proteasome [Oryza sativa (japonica cultivar-group)]
 gi|46275847|gb|AAS86397.1| Gene info 20S proteasome beta subunit [Oryza sativa (japonica cultivar-group)]
 gi|113578385|dbj|BAF16748.1| Gene info Os05g0187000 [Oryza sativa (japonica cultivar-group)]
Length=272

 Score = 32.3 bits (72),  Expect = 1.5
 Identities = 14/57 (24%), Positives = 32/57 (56%), Gaps = 0/57 (0%)
 Frame = +1

Query  139  TGTSVVALKYKDGILMAADMGGSYGSTLRYKSVERMKPIGKHSLLGASGEISDFQEI  309
            TGT++V L ++DG+++ AD   + G  +  K+ E++  +  +     +G  +D + +
Sbjct  37   TGTTIVGLVFQDGVVLGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAV  93


>gi|115466298|ref|NP_001056748.1| Gene info Os06g0139900 [Oryza sativa (japonica cultivar-group)]
 gi|55296478|dbj|BAD68674.1| Gene info putative beta 1 subunit of 20S proteasome [Oryza sativa (japonica 
cultivar-group)]
 gi|113594788|dbj|BAF18662.1| Gene info Os06g0139900 [Oryza sativa (japonica cultivar-group)]
Length=246

 Score = 30.8 bits (68),  Expect = 4.3
 Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 0/78 (0%)
 Frame = +1

Query  88   GLLGPESDSQRTLYPYVTGTSVVALKYKDGILMAADMGGSYGSTLRYKSVERMKPIGKHS  267
            G   P +    T   +  GT++V + Y  G+++AAD   S G  +  ++ +++  +  + 
Sbjct  7    GSPSPAAGDAPTSGEHRMGTTIVGVCYDGGVVLAADSRTSTGMYVANRASDKITQLTDNV  66

Query  268  LLGASGEISDFQEILRFL  321
             +  SG  +D Q I  ++
Sbjct  67   YVCRSGSAADTQVISEYV  84


>gi|115448935|ref|NP_001048247.1| Gene info Os02g0770000 [Oryza sativa (japonica cultivar-group)]
 gi|8671502|dbj|BAA96834.1| UniGene infoGene info beta 1 subunit of 20S proteasome [Oryza sativa (japonica cultivar-group)]
 gi|46805414|dbj|BAD16916.1| Gene info beta 1 subunit of 20S proteasome [Oryza sativa (japonica cultivar-group)]
 gi|113537778|dbj|BAF10161.1| Gene info Os02g0770000 [Oryza sativa (japonica cultivar-group)]
Length=246

 Score = 30.0 bits (66),  Expect = 7.3
 Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 0/56 (0%)
 Frame = +1

Query  142  GTSVVALKYKDGILMAADMGGSYGSTLRYKSVERMKPIGKHSLLGASGEISDFQEI  309
            GT++V + Y  G+++AAD   S G  +  ++ +++  +  +  +  SG  +D Q I
Sbjct  25   GTTIVGVCYDGGVVLAADSRTSTGMYVANRASDKITQLTDNVYICRSGSAADTQVI  80







  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 15, 2007  4:53 AM
  Number of letters in database: 101,054,579
  Number of sequences in database:  283,349
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283349
Number of Hits to DB: 376
Number of extensions: 5
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 635
Length of database: 101054579
Length adjustment: 108
Effective length of query: 527
Effective length of database: 70452887
Effective search space: 7256647361
Effective search space used: 7256647361
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 65 (29.6 bits)