Header of the page

BLASTX 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman 
(1997), "Gapped BLAST and PSI-BLAST: a new generation of 
protein database search programs", Nucleic Acids Res. 25:3389-3402.

RID: 1168931919-20024-101347807775.BLASTQ1


Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
           4,458,890 sequences; 1,532,996,420 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Query=  Contig72
Length=707


Distribution of 10 Blast Hits on the Query Sequence



                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|13359451|dbj|BAB33421.1|  putative senescence-associated prote   247    4e-65
gi|38640720|gb|AAR25995.1|  putative senescence-associated protei  94.7    3e-19
gi|110740129|dbj|BAF01964.1|  hypothetical protein [Arabidopsis t  87.0    6e-17
gi|75755920|gb|ABA27017.1|  TO54-2 [Taraxacum officinale]          66.6    9e-11
gi|27497473|emb|CAD59868.1|  reverse transcriptase [Cicer arietin  33.5    0.80 
gi|116309388|emb|CAH66466.1|  OSIGBa0113L04.3 [Oryza sativa (indi  31.6    3.0  
gi|115458164|ref|NP_001052682.1|  Os04g0400500 [Oryza sativa (...  31.6    3.0   Gene info
gi|37991873|gb|AAR06319.1|  hypothetical protein [Oryza sativa...  30.0    8.8   Gene info
Alignments
>gi|13359451|dbj|BAB33421.1| putative senescence-associated protein [Pisum sativum] Length=282 Score = 247 bits (630), Expect = 4e-65 Identities = 123/149 (82%), Positives = 129/149 (86%), Gaps = 1/149 (0%) Frame = +3 Query 129 VASSPDSDLEAFSHNPAHGSFAPLAFQPNAMTNCANQRFLSY*VELLSRRGHQ*GKTNLS 308 +ASSPDSDLEAFSHNP HGSFAPLAFQP+AMTNCANQRFLSY VELL R HQ GKTNLS Sbjct 6 IASSPDSDLEAFSHNPTHGSFAPLAFQPSAMTNCANQRFLSYYVELLLRHCHQWGKTNLS 65 Query 309 HDGLNPAHVPYWWVNNPTLGEFCFTMIGRADIEGSKSNVAMNAWLPQASYPCGNFF*HL* 488 HDGL PAHVPYWWVNNPTLGEFCFTMIGRADIEGSKSNVAMNAWLPQASYPCGNF Sbjct 66 HDGLIPAHVPYWWVNNPTLGEFCFTMIGRADIEGSKSNVAMNAWLPQASYPCGNFSDTSS 125 Query 489 LQIPEGLKDR*ATLSRFVFVLEIKNQTSF 575 + LKDR ATLSRFVFVLEI+ + +F Sbjct 126 FKF-RSLKDRLATLSRFVFVLEIRIKRAF 153 Score = 52.4 bits (124), Expect = 2e-06 Identities = 33/60 (55%), Positives = 38/60 (63%), Gaps = 3/60 (5%) Frame = +1 Query 460 PVVTFSDTSSFKSPKV*RIDRPRFHGSYSY-WKSRIKRAFTLLFHTRFLFSVELILGHLR 636 P FSDTSSFK + DR + + + RIKRAFTLLFHTRFLFS+ LGHLR Sbjct 116 PCGNFSDTSSFKFRSL--KDRLATLSRFVFVLEIRIKRAFTLLFHTRFLFSLSSSLGHLR 173 >gi|38640720|gb|AAR25995.1| putative senescence-associated protein [Pyrus communis] Length=93 Score = 94.7 bits (234), Expect = 3e-19 Identities = 54/83 (65%), Positives = 57/83 (68%), Gaps = 11/83 (13%) Frame = +3 Query 375 CFTMIGRADIEGSKSNVAMNAWLPQASYPCGNFF*HL*LQIPEGLKDR*ATLS-RFVFVL 551 CFTMIGRADIEGSKSNVAMNAWLPQASYPCGNF K R + S F + Sbjct 1 CFTMIGRADIEGSKSNVAMNAWLPQASYPCGNF------SDTSSFKFRRSKGSIGHAFTV 54 Query 552 EIK----NQTSFYPFVPHEISVL 608 I+ NQTSFYPFVPHEISVL Sbjct 55 RIRTGNQNQTSFYPFVPHEISVL 77 >gi|110740129|dbj|BAF01964.1| hypothetical protein [Arabidopsis thaliana] Length=167 Score = 87.0 bits (214), Expect = 6e-17 Identities = 51/80 (63%), Positives = 54/80 (67%), Gaps = 11/80 (13%) Frame = +3 Query 384 MIGRADIEGSKSNVAMNAWLPQASYPCGNFF*HL*LQIPEGLKDR*ATLS-RFVFVLEIK 560 MIGRADIEGSKSNVAMNAWLPQASYPCGNF K R + S F + I+ Sbjct 1 MIGRADIEGSKSNVAMNAWLPQASYPCGNF------SDTSSFKFRRSKGSIGHAFTVRIR 54 Query 561 ----NQTSFYPFVPHEISVL 608 NQTSFYPFVPHEISVL Sbjct 55 TENQNQTSFYPFVPHEISVL 74 >gi|75755920|gb|ABA27017.1| TO54-2 [Taraxacum officinale] Length=79 Score = 66.6 bits (161), Expect = 9e-11 Identities = 41/71 (57%), Positives = 44/71 (61%), Gaps = 11/71 (15%) Frame = +3 Query 411 SKSNVAMNAWLPQASYPCGNFF*HL*LQIPEGLKDR*ATLS-RFVFVLEIK----NQTSF 575 SKSNVAMNAWLPQASYPCGNF K R + S F + I+ NQTSF Sbjct 3 SKSNVAMNAWLPQASYPCGNF------SDTSSFKFRRSKGSLGHAFTVRIRTGNQNQTSF 56 Query 576 YPFVPHEISVL 608 YP VPHEISVL Sbjct 57 YPSVPHEISVL 67 >gi|27497473|emb|CAD59868.1| reverse transcriptase [Cicer arietinum] Length=37 Score = 33.5 bits (75), Expect = 0.80 Identities = 14/17 (82%), Positives = 14/17 (82%), Gaps = 0/17 (0%) Frame = +3 Query 12 AALCPTPHAPGRHGGRG 62 A L PT HAPGRHGGRG Sbjct 1 ADLGPTSHAPGRHGGRG 17 Score = 31.6 bits (70), Expect = 3.0 Identities = 13/20 (65%), Positives = 14/20 (70%), Gaps = 0/20 (0%) Frame = -3 Query 699 PTLHAPGRHGGPREFD*AVV 640 PT HAPGRHGG FD V+ Sbjct 5 PTSHAPGRHGGRGXFDNTVI 24 >gi|116309388|emb|CAH66466.1| OSIGBa0113L04.3 [Oryza sativa (indica cultivar-group)] Length=207 Score = 31.6 bits (70), Expect = 3.0 Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 0/23 (0%) Frame = -2 Query 100 PRTLRCYHCLIEFPRPPWRPGAC 32 P T +CYHC E P PP +P C Sbjct 107 PSTQQCYHCCPEPPPPPPKPKPC 129 >gi|115458164|ref|NP_001052682.1| Gene info Os04g0400500 [Oryza sativa (japonica cultivar-group)] gi|38605807|emb|CAE05278.3| Gene info OSJNBb0014D23.12 [Oryza sativa (japonica cultivar-group)] gi|113564253|dbj|BAF14596.1| Gene info Os04g0400500 [Oryza sativa (japonica cultivar-group)] Length=213 Score = 31.6 bits (70), Expect = 3.0 Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 0/23 (0%) Frame = -2 Query 100 PRTLRCYHCLIEFPRPPWRPGAC 32 P T +CYHC E P PP +P C Sbjct 113 PSTQQCYHCCPEPPPPPPKPKPC 135 >gi|37991873|gb|AAR06319.1| Gene info hypothetical protein [Oryza sativa (japonica cultivar-group)] gi|108709595|gb|ABF97390.1| hypothetical protein LOC_Os03g39370 [Oryza sativa (japonica cultivar-group)] Length=283 Score = 30.0 bits (66), Expect = 8.8 Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 0/27 (0%) Frame = -2 Query 442 SQAFIATLLFDPSMSALPIIVKQNSPS 362 SQAF A LL D + +A+P++V Q P+ Sbjct 229 SQAFSAVLLADANRAAIPVVVVQKRPA 255
  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 15, 2007  4:53 AM
  Number of letters in database: 101,054,579
  Number of sequences in database:  283,349
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283349
Number of Hits to DB: 445
Number of extensions: 7
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 707
Length of database: 101054579
Length adjustment: 110
Effective length of query: 597
Effective length of database: 69886189
Effective search space: 8735773625
Effective search space used: 8735773625
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 66 (30.0 bits)