RID=1168936411-6386-46856368466.BLASTQ1, Contig81

BLASTX 2.2.15 [Oct-15-2006]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168936411-6386-46856368466.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Query=  Contig81
Length=730

Distribution of 26 Blast Hits on the Query Sequence

                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|18410639|ref|NP_567044.1|  unknown protein [Arabidopsis tha...   112    8e-37 
gi|115463619|ref|NP_001055409.1|  Os05g0383000 [Oryza sativa (...   107    2e-36 
gi|50511400|gb|AAT77323.1|  unknown protein [Oryza sativa (japoni   108    3e-33
gi|108708226|gb|ABF96021.1|  Tetratricopeptide repeat protein ...   110    6e-32
gi|115442269|ref|NP_001045414.1|  Os01g0951800 [Oryza sativa (...   104    4e-29 
gi|57900478|dbj|BAD87890.1|  unknown protein [Oryza sativa (japon   104    4e-29
gi|18416852|ref|NP_568272.1|  unknown protein [Arabidopsis tha...  94.0    1e-24 
gi|3776579|gb|AAC64896.1|  Strong similarity to F22O13.22 gi|3...  31.6    3.2  
gi|15221848|ref|NP_175858.1|  XIE; motor/ protein binding [Arabid  31.6    3.2   
gi|87240450|gb|ABD32308.1|  Kinesin, motor region [Medicago trunc  31.2    4.2

Alignments

 

>gi|18410639|ref|NP_567044.1|  unknown protein [Arabidopsis thaliana]
 gi|6911879|emb|CAB72179.1|  hypothetical protein [Arabidopsis thaliana]
 gi|15215652|gb|AAK91371.1|  AT3g57090/F24I3_170 [Arabidopsis thaliana]
 gi|20453349|gb|AAM19913.1|  AT3g57090/F24I3_170 [Arabidopsis thaliana]
 gi|21593138|gb|AAM65087.1|  unknown [Arabidopsis thaliana]
 gi|78675519|dbj|BAE47515.1|  mitochondrial fission protein AtFIS1a [Arabidopsis thaliana]
Length=170

 Score =  112 bits (281),  Expect(4) = 8e-37
 Identities = 55/70 (78%), Positives = 63/70 (90%), Gaps = 0/70 (0%)
 Frame = +3

Query  279  EELKSESIMRLSWALVHSRQAEDVQRGIAMLEASLANSSSPLQHREKLYLLAVGYYRTGE  458
            E+LK E +MRLSWALVHSRQ EDVQRGIAMLEASL +S+ PL+ REKLYLLAVGYYR+G 
Sbjct  46   EDLKKECLMRLSWALVHSRQTEDVQRGIAMLEASLESSAPPLEDREKLYLLAVGYYRSGN  105

Query  459  YSRSRQLVEQ  488
            YSRSRQLV++
Sbjct  106  YSRSRQLVDR  115


 Score = 40.4 bits (93),  Expect(4) = 8e-37
 Identities = 16/23 (69%), Positives = 22/23 (95%), Gaps = 0/23 (0%)
 Frame = +1

Query  142  MEAKIGKFFESVGSFFGGADQIP  210
            M+AKIG+FF+SVG+FF G+D+IP
Sbjct  1    MDAKIGQFFDSVGTFFSGSDKIP  23


 Score = 33.9 bits (76),  Expect(4) = 8e-37
 Identities = 12/19 (63%), Positives = 14/19 (73%), Gaps = 0/19 (0%)
 Frame = +2

Query  203  KSPWCDRDIIVACEREVAD  259
            K PWCD D+I  CEREV +
Sbjct  21   KIPWCDGDVIAGCEREVRE  39


 Score = 27.7 bits (60),  Expect(4) = 8e-37
 Identities = 12/21 (57%), Positives = 15/21 (71%), Gaps = 0/21 (0%)
 Frame = +1

Query  535  RRQXXDRIAKDGVIAIGIXAT  597
            ++   D+I KDGVI IGI AT
Sbjct  130  KKTIEDKITKDGVIGIGITAT  150


>gi|115463619|ref|NP_001055409.1|  Os05g0383000 [Oryza sativa (japonica cultivar-group)]
 gi|113578960|dbj|BAF17323.1|  Os05g0383000 [Oryza sativa (japonica cultivar-group)]
Length=164

 Score =  107 bits (266),  Expect(4) = 2e-36
 Identities = 53/70 (75%), Positives = 60/70 (85%), Gaps = 0/70 (0%)
 Frame = +3

Query  279  EELKSESIMRLSWALVHSRQAEDVQRGIAMLEASLANSSSPLQHREKLYLLAVGYYRTGE  458
            EE KS+SIMRLSWALVHS+  EDV RGI MLEASL  S+SPLQ REKLYLLAVG+YR G+
Sbjct  43   EEQKSDSIMRLSWALVHSKNQEDVNRGIGMLEASLGQSNSPLQTREKLYLLAVGHYRNGD  102

Query  459  YSRSRQLVEQ  488
            Y RSRQLV++
Sbjct  103  YPRSRQLVDR  112


 Score = 39.3 bits (90),  Expect(4) = 2e-36
 Identities = 18/23 (78%), Positives = 18/23 (78%), Gaps = 0/23 (0%)
 Frame = +1

Query  142  MEAKIGKFFESVGSFFGGADQIP  210
            MEAKIGK  ESVGSFF G D IP
Sbjct  1    MEAKIGKLVESVGSFFSGGDTIP  23


 Score = 35.0 bits (79),  Expect(4) = 2e-36
 Identities = 13/17 (76%), Positives = 14/17 (82%), Gaps = 0/17 (0%)
 Frame = +2

Query  209  PWCDRDIIVACEREVAD  259
            PWC RDII  CEREVA+
Sbjct  23   PWCTRDIIAGCEREVAE  39


 Score = 32.0 bits (71),  Expect(4) = 2e-36
 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +1

Query  490  CLXIAPDLEASSXPERRQXXDRIAKDGVIAIGIXATCL  603
            CL I PD    +   R+   D+IAKDG+I IGI  T +
Sbjct  113  CLEIQPDWR-QALSLRKAIEDKIAKDGLIGIGIATTAV  149


>gi|50511400|gb|AAT77323.1|  unknown protein [Oryza sativa (japonica cultivar-group)]
Length=123

 Score =  108 bits (270),  Expect(3) = 3e-33
 Identities = 54/75 (72%), Positives = 61/75 (81%), Gaps = 0/75 (0%)
 Frame = +3

Query  279  EELKSESIMRLSWALVHSRQAEDVQRGIAMLEASLANSSSPLQHREKLYLLAVGYYRTGE  458
            EE KS+SIMRLSWALVHS+  EDV RGI MLEASL  S+SPLQ REKLYLLAVG+YR G+
Sbjct  43   EEQKSDSIMRLSWALVHSKNQEDVNRGIGMLEASLGQSNSPLQTREKLYLLAVGHYRNGD  102

Query  459  YSRSRQLVEQLFXDC  503
            Y RSRQLV++    C
Sbjct  103  YPRSRQLVDRCLEVC  117


 Score = 39.3 bits (90),  Expect(3) = 3e-33
 Identities = 18/23 (78%), Positives = 18/23 (78%), Gaps = 0/23 (0%)
 Frame = +1

Query  142  MEAKIGKFFESVGSFFGGADQIP  210
            MEAKIGK  ESVGSFF G D IP
Sbjct  1    MEAKIGKLVESVGSFFSGGDTIP  23


 Score = 35.0 bits (79),  Expect(3) = 3e-33
 Identities = 13/17 (76%), Positives = 14/17 (82%), Gaps = 0/17 (0%)
 Frame = +2

Query  209  PWCDRDIIVACEREVAD  259
            PWC RDII  CEREVA+
Sbjct  23   PWCTRDIIAGCEREVAE  39


>gi|108708226|gb|ABF96021.1|  Tetratricopeptide repeat protein 11, putative, expressed [Oryza 
sativa (japonica cultivar-group)]
Length=173

 Score =  110 bits (274),  Expect(3) = 6e-32
 Identities = 54/70 (77%), Positives = 63/70 (90%), Gaps = 0/70 (0%)
 Frame = +3

Query  279  EELKSESIMRLSWALVHSRQAEDVQRGIAMLEASLANSSSPLQHREKLYLLAVGYYRTGE  458
            EE K+ES+MRLSWALVHSRQ EDV RGI ML+ASL  S+SPLQ REKLYLLAVG+YRTG+
Sbjct  43   EEQKNESLMRLSWALVHSRQPEDVNRGIGMLQASLDRSTSPLQTREKLYLLAVGHYRTGD  102

Query  459  YSRSRQLVEQ  488
            Y+RSRQL+E+
Sbjct  103  YTRSRQLLER  112


 Score = 35.8 bits (81),  Expect(3) = 6e-32
 Identities = 13/17 (76%), Positives = 14/17 (82%), Gaps = 0/17 (0%)
 Frame = +2

Query  209  PWCDRDIIVACEREVAD  259
            PWCDRDII  CE EVA+
Sbjct  23   PWCDRDIIAGCENEVAE  39


 Score = 32.3 bits (72),  Expect(3) = 6e-32
 Identities = 12/23 (52%), Positives = 18/23 (78%), Gaps = 0/23 (0%)
 Frame = +1

Query  142  MEAKIGKFFESVGSFFGGADQIP  210
            M++ +GK F+SVGS F G+D +P
Sbjct  1    MDSHVGKLFDSVGSIFRGSDTLP  23


>gi|115442269|ref|NP_001045414.1|  Os01g0951800 [Oryza sativa (japonica cultivar-group)]
 gi|113534945|dbj|BAF07328.1|  Os01g0951800 [Oryza sativa (japonica cultivar-group)]
Length=182

 Score =  104 bits (260),  Expect(3) = 4e-29
 Identities = 54/82 (65%), Positives = 62/82 (75%), Gaps = 0/82 (0%)
 Frame = +3

Query  279  EELKSESIMRLSWALVHSRQAEDVQRGIAMLEASLANSSSPLQHREKLYLLAVGYYRTGE  458
            EE K+ SIMRLSWALVHSR  +DV RGIAML+ASL  S SPL+ REKLYLLAVG+YR G+
Sbjct  62   EEHKNVSIMRLSWALVHSRNTDDVNRGIAMLQASLGGSKSPLEAREKLYLLAVGHYRNGD  121

Query  459  YSRSRQLVEQLFXDCPRFGGXL  524
            Y RSRQL+E      P +G  L
Sbjct  122  YPRSRQLLEHCLEIQPGWGQAL  143


 Score = 32.7 bits (73),  Expect(3) = 4e-29
 Identities = 12/23 (52%), Positives = 17/23 (73%), Gaps = 0/23 (0%)
 Frame = +1

Query  142  MEAKIGKFFESVGSFFGGADQIP  210
            MEAKIG+   ++G+FF G D +P
Sbjct  20   MEAKIGRLVGAIGAFFSGGDNVP  42


 Score = 31.2 bits (69),  Expect(3) = 4e-29
 Identities = 12/17 (70%), Positives = 13/17 (76%), Gaps = 0/17 (0%)
 Frame = +2

Query  209  PWCDRDIIVACEREVAD  259
            PWC RDII   EREVA+
Sbjct  42   PWCGRDIIAGVEREVAE  58


>gi|57900478|dbj|BAD87890.1|  unknown protein [Oryza sativa (japonica cultivar-group)]
Length=163

 Score =  104 bits (260),  Expect(3) = 4e-29
 Identities = 54/82 (65%), Positives = 62/82 (75%), Gaps = 0/82 (0%)
 Frame = +3

Query  279  EELKSESIMRLSWALVHSRQAEDVQRGIAMLEASLANSSSPLQHREKLYLLAVGYYRTGE  458
            EE K+ SIMRLSWALVHSR  +DV RGIAML+ASL  S SPL+ REKLYLLAVG+YR G+
Sbjct  43   EEHKNVSIMRLSWALVHSRNTDDVNRGIAMLQASLGGSKSPLEAREKLYLLAVGHYRNGD  102

Query  459  YSRSRQLVEQLFXDCPRFGGXL  524
            Y RSRQL+E      P +G  L
Sbjct  103  YPRSRQLLEHCLEIQPGWGQAL  124


 Score = 32.7 bits (73),  Expect(3) = 4e-29
 Identities = 12/23 (52%), Positives = 17/23 (73%), Gaps = 0/23 (0%)
 Frame = +1

Query  142  MEAKIGKFFESVGSFFGGADQIP  210
            MEAKIG+   ++G+FF G D +P
Sbjct  1    MEAKIGRLVGAIGAFFSGGDNVP  23


 Score = 31.2 bits (69),  Expect(3) = 4e-29
 Identities = 12/17 (70%), Positives = 13/17 (76%), Gaps = 0/17 (0%)
 Frame = +2

Query  209  PWCDRDIIVACEREVAD  259
            PWC RDII   EREVA+
Sbjct  23   PWCGRDIIAGVEREVAE  39


>gi|18416852|ref|NP_568272.1|  unknown protein [Arabidopsis thaliana]
 gi|14586369|emb|CAC42900.1|  putative protein [Arabidopsis thaliana]
 gi|26451525|dbj|BAC42860.1|  unknown protein [Arabidopsis thaliana]
 gi|28973183|gb|AAO63916.1|  unknown protein [Arabidopsis thaliana]
 gi|78675521|dbj|BAE47516.1|  mitochondrial fission related protein AtFIS1b [Arabidopsis thaliana]
Length=167

 Score = 94.0 bits (232),  Expect(3) = 1e-24
 Identities = 46/79 (58%), Positives = 58/79 (73%), Gaps = 0/79 (0%)
 Frame = +3

Query  279  EELKSESIMRLSWALVHSRQAEDVQRGIAMLEASLANSSSPLQHREKLYLLAVGYYRTGE  458
            E  K E IMRLSWALVHS+   D+QRGIAMLEA + N +S ++ REKLYLLA+GYYR+G+
Sbjct  48   EGRKKECIMRLSWALVHSKMPSDIQRGIAMLEALVVNDTSAMKLREKLYLLALGYYRSGD  107

Query  459  YSRSRQLVEQLFXDCPRFG  515
            +SRSR  +E+     P  G
Sbjct  108  FSRSRDCIERCLEVEPESG  126


 Score = 30.0 bits (66),  Expect(3) = 1e-24
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +1

Query  490  CLXIAPDLEASSXPERRQXXDRIAKDGVIAIGIXATCL  603
            CL + P+    +   ++   DRI KDGVI +GI  T +
Sbjct  118  CLEVEPE-SGQAQALKKAIEDRIVKDGVIGVGIAVTAV  154


 Score = 29.6 bits (65),  Expect(3) = 1e-24
 Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 5/29 (17%)
 Frame = +1

Query  142  MEAKIGKFFESVGSFFGG-----ADQIPL  213
            M+A IGK F+SV  FF G     AD+ PL
Sbjct  1    MDAAIGKVFDSVSDFFSGAASASADEFPL  29


>gi|3776579|gb|AAC64896.1|  Strong similarity to F22O13.22 gi|3063460 myosin homolog from 
A. thaliana BAC gb|AC003981. [Arabidopsis thaliana]
Length=1556

 Score = 31.6 bits (70),  Expect = 3.2
 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 0/54 (0%)
 Frame = +3

Query  234  LPVREKLQMLLRVDLEELKSESIMRLSWALVHSRQAEDVQRGIAMLEASLANSS  395
            L  R +L+   RVDLEE K++ I +L  +L   R+  D   G+ + E   A  +
Sbjct  947  LTYRAQLEKRSRVDLEEEKNQEIKKLQSSLEEMRKKVDETNGLLVKEREAAKKA  1000


>gi|15221848|ref|NP_175858.1|  XIE; motor/ protein binding [Arabidopsis thaliana]
Length=1529

 Score = 31.6 bits (70),  Expect = 3.2
 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 0/54 (0%)
 Frame = +3

Query  234  LPVREKLQMLLRVDLEELKSESIMRLSWALVHSRQAEDVQRGIAMLEASLANSS  395
            L  R +L+   RVDLEE K++ I +L  +L   R+  D   G+ + E   A  +
Sbjct  904  LTYRAQLEKRSRVDLEEEKNQEIKKLQSSLEEMRKKVDETNGLLVKEREAAKKA  957


>gi|87240450|gb|ABD32308.1|  Kinesin, motor region [Medicago truncatula]
Length=1049

 Score = 31.2 bits (69),  Expect = 4.2
 Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
 Frame = +3

Query  204  NPPGATATSLLPVREKLQMLLRVDLEELKSESIMRLSWALVHSRQAEDVQRGIAMLEASL  383
            N  G+   +L  + E+L+   ++  E+LKSE          HS   ED+ +GIA+   SL
Sbjct  629  NMYGSGIKALDNLAEELKSNNQLTYEDLKSE-------VAKHSSALEDLFKGIALEADSL  681

Query  384  ANSSSPLQHREKLYLLAVGYYRTGEYSRS  470
             N      H+++  + A  + +   +SR+
Sbjct  682  LNDLQNSLHKQEANVTAFAHQQREAHSRA  710

  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 15, 2007  4:53 AM
  Number of letters in database: 101,054,579
  Number of sequences in database:  283,349
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283349
Number of Hits to DB: 388
Number of extensions: 4
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 730
Length of database: 101054579
Length adjustment: 110
Effective length of query: 620
Effective length of database: 69886189
Effective search space: 9294863137
Effective search space used: 9294863137
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 66 (30.0 bits)