Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168936768-6978-52345142847.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig87 Length=454
Score E Sequences producing significant alignments: (Bits) Value gi|66775524|gb|AAY56337.1| elongation factor-1 alpha [Musa acumi 57.0 5e-17 gi|48527431|gb|AAT45847.1| elongation factor 1-alpha 1 [Elaeis g 57.0 5e-17 gi|18419676|gb|AAL69396.1| elongation factor 1-alpha [Elaeis ole 57.0 5e-17 gi|61741088|gb|AAX54511.1| elongation factor 1 alpha [Actinidia 57.0 5e-17 gi|5917747|gb|AAD56020.1|AF181492_1 elongation factor-1 alpha 3 57.0 5e-17 gi|5917745|gb|AAD56019.1|AF181491_1 elongation factor-1 alpha 2 57.0 5e-17 gi|74486740|gb|ABA12223.1| translation elongation factor 1A-7 [G 57.0 5e-17 gi|74486728|gb|ABA12217.1| translation elongation factor 1A-1 [G 57.0 5e-17 gi|74486736|gb|ABA12221.1| translation elongation factor 1A-5 [G 57.0 5e-17 gi|74486742|gb|ABA12224.1| translation elongation factor 1A-8 [G 57.0 5e-17 gi|74486734|gb|ABA12220.1| translation elongation factor 1A-4 [G 57.0 5e-17 gi|74486744|gb|ABA12225.1| translation elongation factor 1A-9 [G 57.0 5e-17 gi|74486732|gb|ABA12219.1| translation elongation factor 1A-3 [G 57.0 5e-17 gi|3869088|dbj|BAA34348.1| elongation factor-1 alpha [Nicotiana 57.0 5e-17 gi|6015058|sp|O49169|EF1A_MANES Elongation factor 1-alpha (EF... 57.0 5e-17 gi|24371055|dbj|BAC22125.1| eukaryotic elongation factor 1A [Bru 56.6 7e-17 gi|7230393|gb|AAF42980.1| elongation factor 1 alpha [Zea mays] 56.2 9e-17 gi|74486738|gb|ABA12222.1| translation elongation factor 1A-6 [G 56.2 9e-17 gi|4680249|gb|AAD27590.1|AF121261_1 elongation factor 1-alpha 1; 57.0 1e-16 gi|3122060|sp|O24534|EF1A_VICFA Elongation factor 1-alpha (EF... 57.0 2e-16 gi|18873725|gb|AAL79774.1|AF331849_1 elongation factor 1 alpha [ 55.5 2e-16 gi|2996096|gb|AAC15413.1| translation elongation factor-1 alp... 55.5 2e-16 gi|2282584|gb|AAB64207.1| elongation factor 1-alpha [Zea mays] 55.5 2e-16 gi|74486730|gb|ABA12218.1| translation elongation factor 1A-2 [G 55.5 2e-16 gi|115451089|ref|NP_001049145.1| Os03g0177400 [Oryza sativa (... 55.5 2e-16 gi|3122071|sp|Q41803|EF1A_MAIZE Elongation factor 1-alpha (EF... 55.5 2e-16 gi|399414|sp|Q03033|EF1A_WHEAT Elongation factor 1-alpha (EF-... 55.5 2e-16 gi|2662343|dbj|BAA23658.1| EF-1 alpha [Oryza sativa] 55.5 2e-16 gi|108706480|gb|ABF94275.1| Elongation factor 1-alpha, putati... 55.5 2e-16 gi|8778823|gb|AAF79822.1|AC026875_2 T6D22.2 [Arabidopsis thalian 55.1 2e-16 gi|232029|sp|P29521|EF1A1_DAUCA Elongation factor 1-alpha (EF... 57.0 2e-16 gi|110741201|dbj|BAF02151.1| elongation factor 1-alpha [Arabidop 55.1 2e-16 gi|89276321|gb|ABD66517.1| EF-1 alpha [Gymnadenia conopsea] 55.1 2e-16 gi|4138179|emb|CAA11705.1| elongation factor 1 alpha subunit [Ma 55.1 2e-16 gi|23397097|gb|AAN31833.1| putative translation elongation fa... 55.1 2e-16 gi|13430510|gb|AAK25877.1|AF360167_1 putative translation elo... 55.1 2e-16 gi|18086389|gb|AAL57653.1| At1g07930/T6D22_3 [Arabidopsis thalia 55.1 2e-16 gi|17064954|gb|AAL32631.1| putative elongation factor 1-a [Ar... 55.1 2e-16 gi|1352345|sp|P25698|EF1A_SOYBN Elongation factor 1-alpha (EF... 55.1 2e-16 gi|1864017|dbj|BAA09709.1| elongation factor-1 alpha [Nicotiana 55.1 2e-16 gi|1169476|sp|P43643|EF1A_TOBAC Elongation factor 1-alpha (EF... 55.1 2e-16 gi|15239308|ref|NP_200847.1| calmodulin binding / translation... 55.1 2e-16 gi|79331520|ref|NP_001032107.1| calmodulin binding / translat... 55.1 2e-16 gi|4731316|gb|AAD28440.1| elongation factor 1-alpha [Nicotiana t 56.2 3e-16 gi|40217939|gb|AAR82894.1| elongation factor 1-alpha [Cichorium 54.7 3e-16 gi|9802384|gb|AAF99703.1| elongation factor [Saccharum officinar 54.7 3e-16 gi|7230391|gb|AAF42979.1| elongation factor 1 alpha [Zea mays] 54.7 3e-16 gi|26324158|gb|AAN77897.1| elongation factor 1 alpha [Stevia reb 54.7 3e-16 gi|7230395|gb|AAF42981.1| elongation factor 1 alpha [Zea mays] 54.7 3e-16 gi|7230387|gb|AAF42977.1| elongation factor 1 alpha [Zea mays] 54.7 3e-16 gi|7230385|gb|AAF42976.1| elongation factor 1 alpha [Zea mays] 54.7 3e-16 gi|83283977|gb|ABC01896.1| elongation factor 1-alpha-like protei 54.7 3e-16 gi|82621190|gb|ABB86283.1| elongation factor-1 alpha-like [Solan 54.7 3e-16 gi|82400148|gb|ABB72813.1| elongation factor 1-alpha-like protei 54.7 3e-16 gi|81076159|gb|ABB55388.1| elongation factor 1-alpha-like [Solan 54.7 3e-16 gi|119150|sp|P17786|EF1A_LYCES Elongation factor 1-alpha (EF-... 54.7 3e-16 gi|461987|sp|P34823|EF1A2_DAUCA Elongation factor 1-alpha (EF... 54.7 3e-16 gi|24745945|dbj|BAC23049.1| Elongation factor 1-alpha [Solanum t 54.7 3e-16 gi|77999261|gb|ABB16977.1| elongation factor 1-alpha-like protei 54.7 3e-16 gi|108706481|gb|ABF94276.1| Elongation factor 1-alpha, putati... 54.3 3e-16 gi|295789|emb|CAA34456.1| elongation factor 1-alpha [Arabidopsis 53.9 3e-16 gi|13605682|gb|AAK32834.1|AF361822_1 At1g07930/T6D22_3 [Arabi... 53.9 4e-16 gi|7230397|gb|AAF42982.1| elongation factor 1 alpha [Zea mays] 53.9 4e-16 gi|29243204|dbj|BAC66180.1| elongation factor 1A [Avicennia mari 53.9 4e-16 gi|3122053|sp|Q41011|EF1A_PEA Elongation factor 1-alpha (EF-1... 57.0 1e-15 gi|24371057|dbj|BAC22126.1| eukaryotic elongation factor 1A [Sua 53.9 2e-15 gi|24371059|dbj|BAC22127.1| eukaryotic elongation factor 1A [Sal 53.9 2e-15 gi|461988|sp|P34824|EF1A1_HORVU Elongation factor 1-alpha (EF-1- 54.7 3e-15 gi|15081765|gb|AAK82537.1| At1g07930/T6D22_3 [Arabidopsis thalia 54.7 5e-15 gi|77999299|gb|ABB16996.1| elongation factor 1-alpha-like protei 54.7 1e-14 gi|6015054|sp|Q40034|EF1A2_HORVU Elongation factor 1-alpha (E... 52.4 1e-14 gi|18873727|gb|AAL79775.1| elongation factor 1 alpha [Saccharum 49.3 1e-13 gi|12580861|emb|CAC27139.1| translation elongation factor-1 alph 46.6 5e-13 gi|7230389|gb|AAF42978.1| elongation factor 1 alpha [Zea mays] 47.0 9e-13 gi|40748293|gb|AAR89627.1| elongation factor 1 alpha [Citrus sin 49.3 2e-11 gi|33347395|gb|AAQ15280.1| elongation factor 1 alpha [Pyrus pyri 49.3 2e-11 gi|33347397|gb|AAQ15281.1| elongation factor 1 alpha [Pyrus pyri 49.3 2e-11 gi|1673426|emb|CAA68246.1| factor 1-alpha [Forsythia x intermedi 49.3 2e-11 gi|56112439|gb|AAV71174.1| elongation factor 1-alpha [Lotus corn 49.3 2e-11 gi|85717894|gb|ABC74971.1| elongation factor 1 alpha [Malus x do 49.3 2e-11 gi|1669668|emb|CAA65798.1| EF1-alpha [Forsythia x intermedia] 49.3 2e-11 gi|29892963|emb|CAD60652.1| elongation factor [Solanum tuberosum 45.4 3e-11 gi|27414140|gb|AAO12048.1| elongation factor 1-alpha [Poncirus t 49.3 2e-10 gi|4586588|dbj|BAA76426.1| translation elongation factor [Cicer 49.3 2e-10 gi|119721291|gb|ABL98118.1| elongation factor 1-alpha [Euphorbia 49.3 2e-10 gi|62362578|gb|AAX81595.1| elongation factor elF1-alpha [Populus 48.1 4e-10 gi|90823336|gb|ABE01138.1| elongation factor 1-alpha [Daucus car 47.8 5e-10 gi|115345316|dbj|BAF33334.1| elongation factor 1 alpha [Capsicum 49.3 6e-09 gi|7542600|gb|AAF63516.1|AF242732_1 translation elongation facto 58.2 1e-08 gi|37783255|gb|AAP04393.1| translation elongation factor 1 alpha 48.1 2e-07 gi|92873453|gb|ABE81895.1| Protein synthesis factor, GTP-binding 42.7 3e-07 gi|29419231|gb|AAO61852.1| translation elongation factor-1 alpha 49.3 6e-06 gi|77745446|gb|ABB02622.1| elongation factor 1-alpha-like protei 48.5 9e-06 gi|77999257|gb|ABB16975.1| elongation factor 1-alpha-like protei 47.8 2e-05 gi|914913|gb|AAA86366.1| elongation factor EF-1A 40.8 3e-05 gi|92887995|gb|ABE89121.1| Protein synthesis factor, GTP-binding 31.2 1.6 gi|15235288|ref|NP_193742.1| EMB1025 [Arabidopsis thaliana] >... 30.8 2.0
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 231 Number of extensions: 1 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 454 Length of database: 101054579 Length adjustment: 103 Effective length of query: 351 Effective length of database: 71869632 Effective search space: 3449742336 Effective search space used: 3449742336 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 62 (28.5 bits)