Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1169014165-19102-27613625054.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,460,989 sequences; 1,533,424,333 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig366 Length=538
Score E Sequences producing significant alignments: (Bits) Value gi|8778446|gb|AAF79454.1|AC025808_36 F18O14.5 [Arabidopsis thali 181 1e-45 gi|18394724|ref|NP_564079.1| unknown protein [Arabidopsis tha... 181 1e-45 gi|85070180|gb|ABC69763.1| unknown [Vitis pseudoreticulata] 175 8e-44 gi|15222092|ref|NP_177643.1| unknown protein [Arabidopsis tha... 171 1e-42 gi|115481666|ref|NP_001064426.1| Os10g0358600 [Oryza sativa (... 160 3e-39 gi|18767383|gb|AAL79349.1|AC099402_13 Hypothetical protein [Oryz 160 3e-39 gi|18057114|gb|AAL58137.1|AC093093_10 hypothetical protein [Oryz 160 3e-39 gi|78708341|gb|ABB47316.1| expressed protein [Oryza sativa (japo 160 3e-39 gi|115449851|ref|NP_001048567.1| Os02g0823200 [Oryza sativa (... 149 5e-36 gi|48716308|dbj|BAD22921.1| hypothetical protein [Oryza sativa ( 149 5e-36 gi|115457076|ref|NP_001052138.1| Os04g0166600 [Oryza sativa (... 148 1e-35 gi|38346468|emb|CAD39573.2| OSJNBa0019G23.16 [Oryza sativa (j... 148 1e-35 gi|38567956|emb|CAD39696.3| OSJNBb0115I21.12 [Oryza sativa (japo 130 3e-30 gi|116059598|emb|CAL55305.1| unnamed protein product [Ostreococc 55.5 1e-07 gi|15231618|ref|NP_191460.1| pectinesterase [Arabidopsis thal... 30.8 3.1 gi|42567657|ref|NP_196142.3| unknown protein [Arabidopsis tha... 30.4 4.0 gi|42568521|ref|NP_200216.2| unknown protein [Arabidopsis thalia 30.4 4.0 gi|28876015|gb|AAO60024.1| hypothetical protein [Oryza sativa (j 30.0 5.2 gi|50428640|gb|AAT76991.1| putative centromere protein [Oryza... 29.6 6.9 gi|22831074|dbj|BAC15936.1| C3HC4-type RING zinc finger prote... 29.6 6.9 gi|115457524|ref|NP_001052362.1| Os04g0280200 [Oryza sativa (... 29.3 9.0
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 16, 2007 5:53 PM Number of letters in database: 101,065,385 Number of sequences in database: 283,397 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283397 Number of Hits to DB: 360 Number of extensions: 2 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 538 Length of database: 101065385 Length adjustment: 106 Effective length of query: 432 Effective length of database: 71025303 Effective search space: 5184847119 Effective search space used: 5184847119 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 64 (29.3 bits)