Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1169014472-5847-29974376179.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,460,989 sequences; 1,533,424,333 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig368 Length=542
Score E Sequences producing significant alignments: (Bits) Value gi|15228424|ref|NP_190437.1| unknown protein [Arabidopsis tha... 282 2e-76 gi|15242792|ref|NP_201156.1| unknown protein [Arabidopsis tha... 281 3e-76 gi|21592733|gb|AAM64682.1| unknown [Arabidopsis thaliana] 280 7e-76 gi|15451014|gb|AAK96778.1| Unknown protein [Arabidopsis thali... 279 2e-75 gi|115446289|ref|NP_001046924.1| Os02g0508000 [Oryza sativa (... 277 2e-74 gi|44888988|gb|AAS48196.1| mitochondrial NADH:ubiquinone oxid... 138 1e-32 gi|21537242|gb|AAM61583.1| unknown [Arabidopsis thaliana] 127 2e-29 gi|8778427|gb|AAF79435.1|AC025808_17 F18O14.34 [Arabidopsis thal 127 2e-29 gi|51971885|dbj|BAD44607.1| unknown protein [Arabidopsis thalian 127 2e-29 gi|51968918|dbj|BAD43151.1| unknown protein [Arabidopsis thalian 127 2e-29 gi|18394761|ref|NP_564091.1| unknown protein [Arabidopsis tha... 127 2e-29 gi|13507025|gb|AAK28403.1|AF249876_1 transcription factor APFI [ 125 1e-28 gi|15220153|ref|NP_175159.1| APFI [Arabidopsis thaliana] >gi|... 125 1e-28 gi|115436010|ref|NP_001042763.1| Os01g0283100 [Oryza sativa (... 124 3e-28 gi|82621186|gb|ABB86281.1| transcription factor APFI-like [Solan 124 3e-28 gi|115487556|ref|NP_001066265.1| Os12g0169700 [Oryza sativa (... 124 3e-28 gi|18425082|ref|NP_569036.1| unknown protein [Arabidopsis tha... 123 4e-28 gi|10177532|dbj|BAB10927.1| ferripyochelin-binding protein-like 123 4e-28 gi|78499705|gb|ABB45859.1| hypothetical protein [Thellungiella h 122 8e-28 gi|40218049|gb|AAR82949.1| putative gamma carbonic anhydrase ... 122 1e-27 gi|115473681|ref|NP_001060439.1| Os07g0642900 [Oryza sativa (... 120 4e-27 gi|13486719|dbj|BAB39954.1| OSJNBa0004B13.8 [Oryza sativa (japon 105 1e-22 gi|53801482|gb|AAU93943.1| gamma-carbonic anhydrase [Helicosp... 99.8 5e-21 gi|44888972|gb|AAS48195.1| mitochondrial NADH:ubiquinone oxid... 67.4 3e-11 gi|5597011|gb|AAD45614.2|L78444_1 serine acetyltranferase 2 [Ara 33.1 0.63 gi|18398491|ref|NP_565421.1| AtSerat3;1 (SERINE ACETYLTRANSFE... 33.1 0.63 gi|62319275|dbj|BAD94503.1| putative protein [Arabidopsis thalia 31.2 2.4 gi|116058486|emb|CAL53675.1| Serine O-acetyltransferase (ISS) [O 30.4 4.1 gi|21553730|gb|AAM62823.1| unknown [Arabidopsis thaliana] 30.0 5.3 gi|18407276|ref|NP_564782.1| DNA binding / transcription fact... 30.0 5.3 gi|30696595|ref|NP_849836.1| DNA binding / transcription factor 30.0 5.3 gi|51090400|dbj|BAD35322.1| hypothetical protein [Oryza sativ... 30.0 5.3 gi|116055834|emb|CAL57919.1| Serine O-acetyltransferase (ISS) [O 29.6 7.0 gi|20198259|gb|AAM15485.1| serine acetyltransferase (GB:AF112303 29.6 7.0 gi|25286519|pir||F84554 probable serine acetyltransferase [im... 29.6 7.0 gi|27261095|dbj|BAC45208.1| putative 4-coumarate--CoA ligase ... 29.3 9.1
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 16, 2007 5:53 PM Number of letters in database: 101,065,385 Number of sequences in database: 283,397 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283397 Number of Hits to DB: 369 Number of extensions: 10 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 542 Length of database: 101065385 Length adjustment: 106 Effective length of query: 436 Effective length of database: 71025303 Effective search space: 5255872422 Effective search space used: 5255872422 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 64 (29.3 bits)