RID=1169015138-10527-136489951215.BLASTQ1, Contig379

BLASTX 2.2.15 [Oct-15-2006]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1169015138-10527-136489951215.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,460,989 sequences; 1,533,424,333 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Query=  Contig379
Length=173

                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|120658|sp|P12858|G3PA_PEA  Glyceraldehyde-3-phosphate dehyd...  58.2    9e-09
gi|20729|emb|CAA33264.1|  unnamed protein product [Pisum sativum]  58.2    9e-09
gi|77540210|gb|ABA86963.1|  glyceraldehyde-3-phosphate dehydro...  57.0    2e-08 
gi|6635338|gb|AAF19788.1|AF162202_1  NADP-dependent glyceralde...  53.1    3e-07 
gi|6063028|gb|AAF03099.1|AF162198_1  NADP-dependent glyceralde...  52.8    4e-07 
gi|120661|sp|P09043|G3PA_TOBAC  Glyceraldehyde-3-phosphate deh...  43.5    2e-04
gi|256963|gb|AAB23532.1|  glyceraldehyde-3-phosphate-dehydroge...  39.3    0.004
gi|166704|gb|AAA32793.1|  glyceraldehyde 3-phosphate dehydroge...  39.3    0.004
gi|20455487|sp|P19866|G3PA_SPIOL  Glyceraldehyde-3-phosphate d...  39.3    0.004
gi|30688425|ref|NP_566796.2|  GAPA (GLYCERALDEHYDE 3-PHOSPHATE...  39.3    0.004 
gi|15222111|ref|NP_172750.1|  NAD binding / glyceraldehyde-3-p...  36.6    0.027 
gi|115458768|ref|NP_001052984.1|  Os04g0459500 [Oryza sativa (...  35.0    0.079 
gi|435103|gb|AAA33780.1|  glyceraldehyde-phosphate dehydrogenase   32.7    0.39 
gi|168523|gb|AAA33484.1|  glyceraldehyde-3-phosphate dehydrogenas  32.3    0.51 
gi|2570495|gb|AAB82133.1|  glyceralehyde-3-phosphate dehydrogenas  32.3    0.51  
gi|120657|sp|P09315|G3PA_MAIZE  Glyceraldehyde-3-phosphate deh...  32.3    0.51 
gi|9280650|gb|AAF86519.1|AC002560_12  F21B7.29 [Arabidopsis thali  29.3    4.3  
gi|22240|emb|CAA30152.1|  GADPH (383 AA) [Zea mays]                28.5    7.4   
gi|6554204|gb|AAF16650.1|AC011661_28  T23J18.2 [Arabidopsis thali  28.5    7.4  
gi|4008010|gb|AAC95353.1|  receptor-like protein kinase [Arabidop  28.5    7.4  
gi|15220353|ref|NP_172602.1|  ATP binding / kinase/ protein ki...  28.5    7.4   
gi|76443929|gb|ABA42672.1|  phytol kinase [Zea mays]               28.1    9.6   
gi|90185109|sp|Q2N2K2|PHYK2_SOYBN  Probable phytol kinase 2, c...  28.1    9.6  
gi|90185111|sp|Q2N2K4|PHYK_MAIZE  Probable phytol kinase, chlo...  28.1    9.6

Alignments

 

>gi|120658|sp|P12858|G3PA_PEA  Glyceraldehyde-3-phosphate dehydrogenase A, chloroplast precursor 
(NADP-dependent glyceraldehydephosphate dehydrogenase subunit 
A)
 gi|12159|emb|CAA36396.1|  glyceraldehyde-3-phosphate dehydrogenase [Pisum sativum]
Length=405

 Score = 58.2 bits (139),  Expect = 9e-09
 Identities = 26/34 (76%), Positives = 29/34 (85%), Gaps = 0/34 (0%)
 Frame = +2

Query  68   KPTLQANGKGFGEFSGLRNSSSSLPFPRKTSDDF  169
            KP ++ANGKGF EFSGLRNSS  LPF RK+SDDF
Sbjct  10   KPAIKANGKGFSEFSGLRNSSRHLPFSRKSSDDF  43


>gi|20729|emb|CAA33264.1|  unnamed protein product [Pisum sativum]
Length=405

 Score = 58.2 bits (139),  Expect = 9e-09
 Identities = 26/34 (76%), Positives = 29/34 (85%), Gaps = 0/34 (0%)
 Frame = +2

Query  68   KPTLQANGKGFGEFSGLRNSSSSLPFPRKTSDDF  169
            KP ++ANGKGF EFSGLRNSS  LPF RK+SDDF
Sbjct  10   KPAIKANGKGFSEFSGLRNSSRHLPFSRKSSDDF  43


>gi|77540210|gb|ABA86963.1|  glyceraldehyde-3-phosphate dehydrogenase A subunit [Glycine max]
Length=403

 Score = 57.0 bits (136),  Expect = 2e-08
 Identities = 26/34 (76%), Positives = 29/34 (85%), Gaps = 0/34 (0%)
 Frame = +2

Query  68   KPTLQANGKGFGEFSGLRNSSSSLPFPRKTSDDF  169
            KP LQANGKGF EFSGLR+SS  LPF RK+S+DF
Sbjct  10   KPALQANGKGFSEFSGLRSSSGFLPFSRKSSEDF  43


>gi|6635338|gb|AAF19788.1|AF162202_1  NADP-dependent glyceraldehyde phosphate dehydrogenase [Lactuca 
sativa]
Length=113

 Score = 53.1 bits (126),  Expect = 3e-07
 Identities = 24/33 (72%), Positives = 29/33 (87%), Gaps = 0/33 (0%)
 Frame = +2

Query  74   TLQANGKGFGEFSGLRNSSSSLPFPRKTSDDFL  172
            +LQ NGKGF EF+GLR+SS+SLPF RK SDDF+
Sbjct  12   SLQVNGKGFSEFAGLRSSSASLPFGRKGSDDFV  44


>gi|6063028|gb|AAF03099.1|AF162198_1  NADP-dependent glyceraldehyde phosphate dehydrogenase [Lactuca 
sativa]
Length=113

 Score = 52.8 bits (125),  Expect = 4e-07
 Identities = 24/32 (75%), Positives = 28/32 (87%), Gaps = 0/32 (0%)
 Frame = +2

Query  74   TLQANGKGFGEFSGLRNSSSSLPFPRKTSDDF  169
            +LQ NGKGF EF+GLR+SS+SLPF RK SDDF
Sbjct  12   SLQVNGKGFSEFAGLRSSSASLPFGRKGSDDF  43


>gi|120661|sp|P09043|G3PA_TOBAC  Glyceraldehyde-3-phosphate dehydrogenase A, chloroplast precursor 
(NADP-dependent glyceraldehydephosphate dehydrogenase subunit 
A)
 gi|170237|gb|AAA34075.1|  glyceraldehyde-3-phosphate dehydrogenase A-subunit precursor
Length=392

 Score = 43.5 bits (101),  Expect = 2e-04
 Identities = 21/33 (63%), Positives = 27/33 (81%), Gaps = 1/33 (3%)
 Frame = +2

Query  74   TLQANGKGFGEFSGLRNSSSSLPFPRKTSDDFL  172
            +LQ + KGF EFSGLR +SS++PF RKT+DD L
Sbjct  3    SLQVSNKGFSEFSGLR-TSSAIPFGRKTNDDLL  34


>gi|256963|gb|AAB23532.1|  glyceraldehyde-3-phosphate-dehydrogenase subunit GapA [Arabidopsis 
thaliana]
Length=68

 Score = 39.3 bits (90),  Expect = 0.004
 Identities = 18/25 (72%), Positives = 21/25 (84%), Gaps = 0/25 (0%)
 Frame = +2

Query  92   KGFGEFSGLRNSSSSLPFPRKTSDD  166
            KGF EFSGLR+SS+SLPF +K S D
Sbjct  10   KGFTEFSGLRSSSASLPFGKKLSSD  34


>gi|166704|gb|AAA32793.1|  glyceraldehyde 3-phosphate dehydrogenase
 gi|1402885|emb|CAA66816.1|  glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) 
[Arabidopsis thaliana]
Length=396

 Score = 39.3 bits (90),  Expect = 0.004
 Identities = 18/25 (72%), Positives = 21/25 (84%), Gaps = 0/25 (0%)
 Frame = +2

Query  92   KGFGEFSGLRNSSSSLPFPRKTSDD  166
            KGF EFSGLR+SS+SLPF +K S D
Sbjct  10   KGFTEFSGLRSSSASLPFGKKLSSD  34


>gi|20455487|sp|P19866|G3PA_SPIOL  Glyceraldehyde-3-phosphate dehydrogenase A, chloroplast precursor 
(NADP-dependent glyceraldehydephosphate dehydrogenase subunit 
A)
 gi|2529370|gb|AAD10217.1|  NADP-dependent glyceraldehydephosphate dehydrogenase subunit 
A [Spinacia oleracea]
Length=401

 Score = 39.3 bits (90),  Expect = 0.004
 Identities = 20/34 (58%), Positives = 24/34 (70%), Gaps = 2/34 (5%)
 Frame = +2

Query  71   PTLQANGKGFGEFSGLRNSSSSLPFPRKTSDDFL  172
            P+L+   KGF EFSGL   +SSLPF RK SDD +
Sbjct  11   PSLRVYNKGFSEFSGLH--TSSLPFGRKGSDDLM  42


>gi|30688425|ref|NP_566796.2|  GAPA (GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE A SUBUNIT); glyceraldehyde-3-phosphate 
dehydrogenase [Arabidopsis thaliana]
 gi|20455490|sp|P25856|G3PA_ARATH  Glyceraldehyde-3-phosphate dehydrogenase A, chloroplast precursor 
(NADP-dependent glyceraldehydephosphate dehydrogenase subunit 
A)
 gi|16226559|gb|AAL16200.1|AF428431_1  AT3g26650/MLJ15_5 [Arabidopsis thaliana]
 gi|11994300|dbj|BAB01730.1|  glyceralehyde-3-phosphate dehydrogenase subunit [Arabidopsis 
thaliana]
 gi|16604418|gb|AAL24215.1|  AT3g26650/MLJ15_5 [Arabidopsis thaliana]
 gi|16648728|gb|AAL25556.1|  AT3g26650/MLJ15_5 [Arabidopsis thaliana]
 gi|19715651|gb|AAL91645.1|  AT3g26650/MLJ15_5 [Arabidopsis thaliana]
 gi|22655450|gb|AAM98317.1|  At3g26650/MLJ15_5 [Arabidopsis thaliana]
Length=396

 Score = 39.3 bits (90),  Expect = 0.004
 Identities = 18/25 (72%), Positives = 21/25 (84%), Gaps = 0/25 (0%)
 Frame = +2

Query  92   KGFGEFSGLRNSSSSLPFPRKTSDD  166
            KGF EFSGLR+SS+SLPF +K S D
Sbjct  10   KGFTEFSGLRSSSASLPFGKKLSSD  34


>gi|15222111|ref|NP_172750.1|  NAD binding / glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)/ 
glyceraldehyde-3-phosphate dehydrogenase [Arabidopsis 
thaliana]
 gi|8698736|gb|AAF78494.1|AC012187_14  Strong similarity to GAPDH subunit A from Pisum sativum gb|X15190 
and contains a GAPDH PF|00044 domain.  ESTs gb|T42920, 
gb|T43410, gb|T46101, gb|T04006, gb|T20630, gb|Z34677, gb|T46805, 
gb|N37754, gb|N37754, gb|Z26072, gb|H37169, gb|H76419, 
gb|T20834, gb|T21557, gb|AA713258, gb|T04005, gb|AI099909, 
gb|Z34793 come from this gene. [Arabidopsis thaliana]
 gi|30794013|gb|AAP40454.1|  putative calcium-binding protein, calreticulin [Arabidopsis thaliana]
 gi|53828641|gb|AAU94430.1|  At1g12900 [Arabidopsis thaliana]
Length=399

 Score = 36.6 bits (83),  Expect = 0.027
 Identities = 20/33 (60%), Positives = 25/33 (75%), Gaps = 5/33 (15%)
 Frame = +2

Query  68   KPTLQANGKGFGEFSGLRNSSSSLPFPRKTSDD  166
            KP+LQ    GF EFSGLRN SS+LPF +++S D
Sbjct  10   KPSLQ----GFSEFSGLRN-SSALPFAKRSSSD  37


>gi|115458768|ref|NP_001052984.1|  Os04g0459500 [Oryza sativa (japonica cultivar-group)]
 gi|21740910|emb|CAD40906.1|  OSJNBa0036B21.24 [Oryza sativa (japonica cultivar-group)]
 gi|32479937|emb|CAE01532.1|  OSJNBa0072F16.1 [Oryza sativa (japonica cultivar-group)]
 gi|113564555|dbj|BAF14898.1|  Os04g0459500 [Oryza sativa (japonica cultivar-group)]
 gi|116310054|emb|CAH67076.1|  OSIGBa0097P08.6 [Oryza sativa (indica cultivar-group)]
 gi|116310439|emb|CAH67444.1|  H0219H12.1 [Oryza sativa (indica cultivar-group)]
Length=402

 Score = 35.0 bits (79),  Expect = 0.079
 Identities = 21/34 (61%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
 Frame = +2

Query  74   TLQANGKGFGEFSGLRNSSSSLPFPRK-TSDDFL  172
            T+   G G  EFSGLR SSSSLP  R  TSDDF+
Sbjct  10   TVPLQGGGLSEFSGLR-SSSSLPLRRNATSDDFM  42


>gi|435103|gb|AAA33780.1|  glyceraldehyde-phosphate dehydrogenase [Pinus sylvestris]
Length=411

 Score = 32.7 bits (73),  Expect = 0.39
 Identities = 16/31 (51%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
 Frame = +2

Query  74   TLQANGKGFGEFSGLRNSSSSLPFPRKTSDD  166
            +LQ +GKGF E+SGL+ SSS  P  RK +++
Sbjct  20   SLQVSGKGFSEYSGLK-SSSGFPCLRKYNEE  49


>gi|168523|gb|AAA33484.1|  glyceraldehyde-3-phosphate dehydrogenase precursor
Length=125

 Score = 32.3 bits (72),  Expect = 0.51
 Identities = 19/29 (65%), Positives = 21/29 (72%), Gaps = 2/29 (6%)
 Frame = +2

Query  89   GKGFGEFSGLRNSSSSLPFPRK-TSDDFL  172
            G G  EFSGLR SS+SLP  R  TSDDF+
Sbjct  16   GGGLSEFSGLR-SSASLPMRRNATSDDFM  43


>gi|2570495|gb|AAB82133.1|  glyceralehyde-3-phosphate dehydrogenase subunit [Oryza sativa]
Length=343

 Score = 32.3 bits (72),  Expect = 0.51
 Identities = 19/35 (54%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
 Frame = +2

Query  71   PTLQANGKGFGEFSGLRNSSSSLPFPR-KTSDDFL  172
            P   + G G  +FSGLR SSSSLP  R  TSD+F+
Sbjct  9    PPCHSRGGGLSDFSGLR-SSSSLPLRRDATSDNFM  42


>gi|120657|sp|P09315|G3PA_MAIZE  Glyceraldehyde-3-phosphate dehydrogenase A, chloroplast precursor 
(NADP-dependent glyceraldehydephosphate dehydrogenase subunit 
A)
 gi|168479|gb|AAA33464.1|  glyceraldehyde-3-phosphate dehydrogenase
 gi|763035|emb|CAA33455.1|  glyceraldehyde-3-phosphate dehydrogenase [Zea mays]
Length=403

 Score = 32.3 bits (72),  Expect = 0.51
 Identities = 19/29 (65%), Positives = 21/29 (72%), Gaps = 2/29 (6%)
 Frame = +2

Query  89   GKGFGEFSGLRNSSSSLPFPRK-TSDDFL  172
            G G  EFSGLR SS+SLP  R  TSDDF+
Sbjct  16   GGGLSEFSGLR-SSASLPMRRNATSDDFM  43


>gi|9280650|gb|AAF86519.1|AC002560_12  F21B7.29 [Arabidopsis thaliana]
Length=407

 Score = 29.3 bits (64),  Expect = 4.3
 Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
 Frame = +1

Query  55   CFCSQTNPSGKWK--GFWRILRPAQLLV*PSLSQEN  156
            C CS   P G WK   FW  + P   +V  S S  N
Sbjct  153  CMCSYVKPCGLWKRIRFWLYMHPRVSIVPTSFSYSN  188


>gi|22240|emb|CAA30152.1|  GADPH (383 AA) [Zea mays]
Length=383

 Score = 28.5 bits (62),  Expect = 7.4
 Identities = 17/24 (70%), Positives = 19/24 (79%), Gaps = 2/24 (8%)
 Frame = +2

Query  104  EFSGLRNSSSSLPFPRK-TSDDFL  172
            EFSGLR SS+SLP  R  TSDDF+
Sbjct  1    EFSGLR-SSASLPMRRNATSDDFM  23


>gi|6554204|gb|AAF16650.1|AC011661_28  T23J18.2 [Arabidopsis thaliana]
Length=809

 Score = 28.5 bits (62),  Expect = 7.4
 Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 0/38 (0%)
 Frame = +1

Query  19   DSFLHNHNGFGYCFCSQTNPSGKWKGFWRILRPAQLLV  132
            ++ + NH+ F + F S  N +G++ G W    P Q +V
Sbjct  35   ETVVSNHSTFRFGFFSPVNSTGRYAGIWFNNIPVQTVV  72


>gi|4008010|gb|AAC95353.1|  receptor-like protein kinase [Arabidopsis thaliana]
Length=830

 Score = 28.5 bits (62),  Expect = 7.4
 Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 0/38 (0%)
 Frame = +1

Query  19   DSFLHNHNGFGYCFCSQTNPSGKWKGFWRILRPAQLLV  132
            ++ + NH+ F + F S  N +G++ G W    P Q +V
Sbjct  35   ETVVSNHSTFRFGFFSPVNSTGRYAGIWFNNIPVQTVV  72


>gi|15220353|ref|NP_172602.1|  ATP binding / kinase/ protein kinase/ protein serine/threonine 
kinase/ protein-tyrosine kinase/ sugar binding [Arabidopsis 
thaliana]
Length=830

 Score = 28.5 bits (62),  Expect = 7.4
 Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 0/38 (0%)
 Frame = +1

Query  19   DSFLHNHNGFGYCFCSQTNPSGKWKGFWRILRPAQLLV  132
            ++ + NH+ F + F S  N +G++ G W    P Q +V
Sbjct  35   ETVVSNHSTFRFGFFSPVNSTGRYAGIWFNNIPVQTVV  72


>gi|76443929|gb|ABA42672.1|  phytol kinase [Zea mays]
Length=268

 Score = 28.1 bits (61),  Expect = 9.6
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 0/29 (0%)
 Frame = +2

Query  74   TLQANGKGFGEFSGLRNSSSSLPFPRKTS  160
            ++ + G GF +  G R  S+ LPF RK S
Sbjct  156  SMMSGGDGFADIVGRRYGSAKLPFNRKKS  184


>gi|90185109|sp|Q2N2K2|PHYK2_SOYBN  Probable phytol kinase 2, chloroplast precursor
 gi|76443935|gb|ABA42675.1|  phytol kinase [Glycine max]
Length=292

 Score = 28.1 bits (61),  Expect = 9.6
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 0/29 (0%)
 Frame = +2

Query  74   TLQANGKGFGEFSGLRNSSSSLPFPRKTS  160
            ++ + G GF +  G R  S+ LPF RK S
Sbjct  180  SMMSGGDGFADIVGRRYGSAKLPFNRKKS  208


>gi|90185111|sp|Q2N2K4|PHYK_MAIZE  Probable phytol kinase, chloroplast precursor
 gi|76443931|gb|ABA42673.1|  phytol kinase [Zea mays]
Length=303

 Score = 28.1 bits (61),  Expect = 9.6
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 0/29 (0%)
 Frame = +2

Query  74   TLQANGKGFGEFSGLRNSSSSLPFPRKTS  160
            ++ + G GF +  G R  S+ LPF RK S
Sbjct  191  SMMSGGDGFADIVGRRYGSAKLPFNRKKS  219

  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 16, 2007  5:53 PM
  Number of letters in database: 101,065,385
  Number of sequences in database:  283,397
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283397
Number of Hits to DB: 123
Number of extensions: 5
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 173
Length of database: 101065385
Length adjustment: 30
Effective length of query: 143
Effective length of database: 92563475
Effective search space: 2499213825
Effective search space used: 2499213825
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 61 (28.1 bits)

Distribution of 24 Blast Hits on the Query Sequence