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BLASTX 2.2.15 [Oct-15-2006] 
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman 
(1997), "Gapped BLAST and PSI-BLAST: a new generation of 
protein database search programs", Nucleic Acids Res. 25:3389-3402.

RID: 1169015383-17524-211480428635.BLASTQ4


Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
           4,460,989 sequences; 1,533,424,333 total letters

 
If you have any problems or questions with the results of this search 
please refer to the BLAST FAQs
Taxonomy reports

Query=  Contig384
Length=527

Distribution of 6 Blast Hits on the Query Sequence


                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|92875898|gb|ABE83698.1|  conserved hypothetical protein [Medic  43.9    3e-04
gi|92885227|gb|ABE87714.1|  Ribonuclease H [Medicago truncatula]   31.6    1.7  
gi|30694946|ref|NP_199452.2|  unknown protein [Arabidopsis thalia  30.0    5.0   UniGene infoGene info
gi|10177721|dbj|BAB11095.1|  unnamed protein product [Arabidopsis  30.0    5.0  
gi|13430778|gb|AAK26011.1|AF360301_1  unknown protein [Arabido...  29.6    6.5   UniGene info
gi|1841475|emb|CAA71992.1|  Myb26 [Pisum sativum]                  29.6    6.5
Alignments

>gi|92875898|gb|ABE83698.1|  conserved hypothetical protein [Medicago truncatula]
Length=243

 Score = 43.9 bits (102),  Expect = 3e-04
 Identities = 30/69 (43%), Positives = 35/69 (50%), Gaps = 12/69 (17%)
 Frame = -3

Query  192  MATAP--VKSQPLHNFNFPFLKW-------gth*gggsstatADH*RSPESDSDHDRLRR  40
            MAT P  VKSQPLHNF+ PFLKW               S    DH   P+S+ D    R 
Sbjct  1    MATTPASVKSQPLHNFSLPFLKWGGTGKNNTNATNHHRSRRPPDHASEPDSEPDS---RP  57

Query  39   TRVGSRSTR  13
             R+GSR+ R
Sbjct  58   HRLGSRTAR  66


>gi|92885227|gb|ABE87714.1|  Ribonuclease H [Medicago truncatula]
Length=646

 Score = 31.6 bits (70),  Expect = 1.7
 Identities = 11/28 (39%), Positives = 16/28 (57%), Gaps = 4/28 (14%)
 Frame = -2

Query  337  RDTAACQTLWWNWKERSE----FGLWDL  266
            R T  C  LWW+W++R++    F  W L
Sbjct  455  RSTVFCACLWWSWRQRNQMCFNFDFWSL  482


>gi|30694946|ref|NP_199452.2| UniGene infoGene info unknown protein [Arabidopsis thaliana]
Length=1036

 Score = 30.0 bits (66),  Expect = 5.0
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 0/49 (0%)
 Frame = +3

Query  177  LVQLPSKKYSENQQKQQLHINDHASLSTKQRSHSPNSLLSFQFHHKVWQ  323
            LVQL SK+Y    + Q L       ++T+Q+S  P +    QF  +  Q
Sbjct  918  LVQLLSKQYQSQAKTQYLQPQQVEQVNTQQQSQEPQNQQQIQFQQQQQQ  966


>gi|10177721|dbj|BAB11095.1|  unnamed protein product [Arabidopsis thaliana]
Length=1022

 Score = 30.0 bits (66),  Expect = 5.0
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 0/49 (0%)
 Frame = +3

Query  177  LVQLPSKKYSENQQKQQLHINDHASLSTKQRSHSPNSLLSFQFHHKVWQ  323
            LVQL SK+Y    + Q L       ++T+Q+S  P +    QF  +  Q
Sbjct  918  LVQLLSKQYQSQAKTQYLQPQQVEQVNTQQQSQEPQNQQQIQFQQQQQQ  966


>gi|13430778|gb|AAK26011.1|AF360301_1 UniGene info unknown protein [Arabidopsis thaliana]
 gi|56550697|gb|AAV97802.1| UniGene info At3g60410 [Arabidopsis thaliana]
Length=324

 Score = 29.6 bits (65),  Expect = 6.5
 Identities = 11/20 (55%), Positives = 15/20 (75%), Gaps = 0/20 (0%)
 Frame = -3

Query  189  ATAPVKSQPLHNFNFPFLKW  130
            +++PVKS PLHNF    L+W
Sbjct  44   SSSPVKSHPLHNFPLSDLRW  63


>gi|1841475|emb|CAA71992.1|  Myb26 [Pisum sativum]
Length=217

 Score = 29.6 bits (65),  Expect = 6.5
 Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 0/69 (0%)
 Frame = +3

Query  87   GQRWRLKNHHLSGFPISETES*SCVKAETLLVQLPSKKYSENQQKQQLHINDHASLSTKQ  266
            G RW     HL G   +E ++    + +  + Q+ +      QQK  L INDH      Q
Sbjct  88   GNRWSKIAKHLPGRTDNEIKNFWRTRIQKHIKQVDNPNQQNFQQKMSLEINDHHHHHPHQ  147

Query  267  RSHSPNSLL  293
             S S  S L
Sbjct  148  PSSSQVSNL  156







  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 16, 2007  5:53 PM
  Number of letters in database: 101,065,385
  Number of sequences in database:  283,397
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283397
Number of Hits to DB: 304
Number of extensions: 1
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 527
Length of database: 101065385
Length adjustment: 106
Effective length of query: 421
Effective length of database: 71025303
Effective search space: 4900745907
Effective search space used: 4900745907
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 63 (28.9 bits)