Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1169015730-6419-65818586092.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,460,989 sequences; 1,533,424,333 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig389 Length=535
Score E Sequences producing significant alignments: (Bits) Value gi|92899282|gb|ABE94618.1| hypothetical protein MtrDRAFT_AC14... 152 4e-46 gi|115478767|ref|NP_001062977.1| Os09g0360400 [Oryza sativa (... 110 9e-28 gi|21553415|gb|AAM62508.1| unknown [Arabidopsis thaliana] 118 1e-26 gi|15234799|ref|NP_192721.1| unknown protein [Arabidopsis tha... 117 2e-26 gi|92872597|gb|ABE81201.1| conserved hypothetical protein [Medic 114 2e-25 gi|32400851|gb|AAP80657.1|AF479038_1 holocarboxylase synthetase 112 8e-25 gi|115438044|ref|NP_001043444.1| Os01g0589500 [Oryza sativa (... 111 2e-24 gi|21553442|gb|AAM62535.1| unknown [Arabidopsis thaliana] 102 8e-22 gi|15238255|ref|NP_201283.1| unknown protein [Arabidopsis tha... 102 8e-22 gi|37806015|dbj|BAC99427.1| putative holocarboxylase syntheta... 92.0 8e-21 gi|115476290|ref|NP_001061741.1| Os08g0397900 [Oryza sativa (... 92.0 3e-19 gi|115434922|ref|NP_001042219.1| Os01g0182500 [Oryza sativa (... 47.8 2e-05 gi|42766610|gb|AAS45435.1| S-adenosylmethionine decarboxylase [B 32.7 0.80 gi|115467960|ref|NP_001057579.1| Os06g0345200 [Oryza sativa (... 32.7 0.80 gi|54291120|dbj|BAD61794.1| putative nicotianamine aminotrans... 32.7 0.80 gi|42795253|gb|AAS45968.1| deficiens [Leucocarpus perfoliatus] 32.0 1.4 gi|4100099|gb|AAD00752.1| hypothetical protein 256 [Secale cerea 32.0 1.4 gi|115477188|ref|NP_001062190.1| Os08g0506700 [Oryza sativa (... 32.0 1.4 gi|40253670|dbj|BAD05613.1| hypothetical protein [Oryza sativa ( 31.6 1.8 gi|116059142|emb|CAL54849.1| DNA-binding protein jumonji/RBP2... 31.2 2.3 gi|116055978|emb|CAL58511.1| possible site-specific DNA-methy... 30.4 4.0 gi|47834711|gb|AAT39009.1| AML1 [Beta vulgaris] 29.6 6.8 gi|47834687|gb|AAT38997.1| AML1 [Beta vulgaris] 29.6 6.8 gi|115441869|ref|NP_001045214.1| Os01g0919800 [Oryza sativa (... 29.6 6.8 gi|92874428|gb|ABE82698.1| Disease resistance protein [Medicago 29.3 8.8 gi|58760233|gb|AAW82031.1| GSP1 [Chlamydomonas incerta] 29.3 8.8 gi|4100093|gb|AAD00748.1| hypothetical protein 256 [Aegilops tau 29.3 8.8 gi|4100105|gb|AAD00756.1| hypothetical protein 256 [Triticum mon 29.3 8.8 gi|15238106|ref|NP_199559.1| unknown protein [Arabidopsis tha... 29.3 8.8
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 16, 2007 5:53 PM Number of letters in database: 101,065,385 Number of sequences in database: 283,397 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283397 Number of Hits to DB: 360 Number of extensions: 11 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 535 Length of database: 101065385 Length adjustment: 106 Effective length of query: 429 Effective length of database: 71025303 Effective search space: 5113821816 Effective search space used: 5113821816 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 64 (29.3 bits)