Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1169015755-7962-7702928709.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,460,989 sequences; 1,533,424,333 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig390 Length=524
Related Structures Score E Sequences producing significant alignments: (Bits) Value gi|2497743|sp|Q43129|NLTP2_GOSHI Nonspecific lipid-transfer p... 70.9 1e-24 gi|2497742|sp|Q42762|NLTP1_GOSHI Nonspecific lipid-transfer p... 70.1 2e-24 gi|49659949|gb|AAT68265.1| lipid transfer protein precursor [Nic 67.8 2e-22 gi|49659945|gb|AAT68263.1| lipid transfer protein [Nicotiana gla 64.7 3e-22 gi|6782436|gb|AAF28385.1|AF151214_1 lipid-transfer protein [Nico 65.9 4e-22 gi|42374744|gb|AAS13435.1| lipid-transfer protein [Nicotiana att 64.7 6e-22 gi|28193997|gb|AAO33357.1|AF465408_1 nonspecific lipid transf... 62.0 4e-21 gi|48526017|gb|AAT45202.1| lipid transfer protein 1 precursor [N 63.9 1e-20 gi|49659943|gb|AAT68262.1| lipid transfer protein [Nicotiana gla 62.4 3e-20 gi|75994596|gb|ABA33862.1| phospholipid transfer protein 1 [Z... 61.6 3e-20 gi|75994582|gb|ABA33855.1| phospholipid transfer protein 1 [Zea 60.5 7e-20 gi|75994586|gb|ABA33857.1| phospholipid transfer protein 1 [Zea 60.5 7e-20 gi|75994564|gb|ABA33846.1| phospholipid transfer protein 1 [Zea 60.1 9e-20 gi|75994568|gb|ABA33848.1| phospholipid transfer protein 1 [Zea 60.1 9e-20 gi|75994566|gb|ABA33847.1| phospholipid transfer protein 1 [Zea 58.9 2e-19 gi|75994572|gb|ABA33850.1| phospholipid transfer protein 1 [Zea 58.9 2e-19 gi|128388|sp|P19656|NLTP_MAIZE Nonspecific lipid-transfer pro... 58.9 2e-19 gi|75994570|gb|ABA33849.1| phospholipid transfer protein 1 [Zea 58.9 2e-19 gi|75994584|gb|ABA33856.1| phospholipid transfer protein 1 [Zea 58.9 2e-19 gi|18477856|emb|CAC86258.1| lipid transfer protein [Fragaria x a 58.2 2e-19 gi|75994588|gb|ABA33858.1| phospholipid transfer protein 1 [Zea 58.9 2e-19 gi|75994604|gb|ABA33866.1| phospholipid transfer protein 1 [Zea 58.9 2e-19 gi|75994578|gb|ABA33853.1| phospholipid transfer protein 1 [Zea 58.9 2e-19 gi|75994592|gb|ABA33860.1| phospholipid transfer protein 1 [Zea 58.9 2e-19 gi|75994089|gb|ABA34080.1| phospholipid transfer protein 2 [Z... 59.3 2e-19 gi|75994107|gb|ABA34089.1| phospholipid transfer protein 2 [Z... 59.3 2e-19 gi|75994095|gb|ABA34083.1| phospholipid transfer protein 2 [Zea 59.3 2e-19 gi|115503789|sp|Q42978|NLTP2_ORYSA Nonspecific lipid-transfer... 60.1 3e-19 gi|629847|pir||S45635 lipid-transfer protein - maize 58.2 3e-19 gi|1827893|pdb|1MZM| Chain , Maize Nonspecific Lipid Transf... 58.2 3e-19 gi|77553487|gb|ABA96283.1| Nonspecific lipid-transfer protein... 60.1 4e-19 gi|75994606|gb|ABA33867.1| phospholipid transfer protein 1 [Zea 58.9 4e-19 gi|67937775|gb|AAY83346.1| non-specific lipid transfer protei... 58.2 4e-19 gi|2407271|gb|AAB70538.1| lipid transfer protein [Oryza sativa] 60.1 4e-19 gi|75994125|gb|ABA34098.1| phospholipid transfer protein 2 [Z... 58.5 4e-19 gi|115486998|ref|NP_001065986.1| Os12g0115000 [Oryza sativa (... 60.1 4e-19 gi|2407273|gb|AAB70539.1| lipid transfer protein LPT II [Oryza s 60.1 5e-19 gi|1498597|gb|AAB06443.1| phospholipid transfer protein [Zea may 57.8 7e-19 gi|951334|gb|AAA74624.1| lipid transfer protein precursor 58.9 7e-19 gi|67937767|gb|AAY83342.1| non-specific lipid transfer protei... 57.8 7e-19 gi|75994113|gb|ABA34092.1| phospholipid transfer protein 2 [Z... 57.8 7e-19 gi|75994580|gb|ABA33854.1| phospholipid transfer protein 1 [Zea 56.6 9e-19 gi|75994590|gb|ABA33859.1| phospholipid transfer protein 1 [Z... 58.9 9e-19 gi|6225766|sp|Q43766|NLTP3_HORVU Nonspecific lipid-transfer p... 61.6 1e-18 gi|110180523|gb|ABG54494.1| putative allergen Rub i 3 [Rubus ida 56.2 1e-18 gi|82780754|gb|ABB90546.1| lipid transfer protein [Triticum a... 61.6 1e-18 gi|75994121|gb|ABA34096.1| phospholipid transfer protein 2 [Z... 57.0 1e-18 gi|75994117|gb|ABA34094.1| phospholipid transfer protein 2 [Z... 57.0 1e-18 gi|2497756|sp|Q43194|NLTP2_SORBI Nonspecific lipid-transfer p... 57.4 2e-18 gi|50659859|gb|AAT80649.1| lipid transfer protein precursor [... 58.9 2e-18 gi|2497755|sp|Q43193|NLTP1_SORBI Nonspecific lipid-transfer p... 56.2 2e-18 gi|31879432|dbj|BAC77694.1| lipid transfer protein [Atriplex num 55.8 2e-18 gi|38492338|gb|AAR22488.1| allergen Mal d 3 [Malus x domestica] 58.5 2e-18 gi|83026871|gb|ABB96481.1| non-specific lipid transfer protei... 58.5 2e-18 gi|14423814|sp|Q9M5X7|NLTP_MALDO Nonspecific lipid-transfer p... 58.5 2e-18 gi|422012|pir||S33460 lipid transfer protein - sorghum (fragm... 61.2 2e-18 gi|82712|pir||JH0379 phospholipid transfer protein 6B6 - maiz... 56.2 3e-18 gi|2497752|sp|Q43017|NLTP1_PRUDU Nonspecific lipid-transfer p... 57.4 3e-18 gi|32966061|gb|AAP92127.1| lipid transfer protein LPT1 [Oryza... 60.1 4e-18 gi|510337|emb|CAA80809.1| lipid transfer protein [Oryza sativa ( 60.1 4e-18 gi|20135538|gb|AAL25839.1| lipid transfer precursor protein [Hev 55.5 6e-18 gi|8980444|emb|CAB96874.1| mal d 3 [Malus x domestica] 57.0 6e-18 gi|2497734|sp|Q43748|NLTP_BETVU Nonspecific lipid-transfer pr... 61.2 7e-18 gi|1098265|prf||2115353A lipid transfer protein 61.6 7e-18 gi|6225764|sp|Q43767|NLT41_HORVU Nonspecific lipid-transfer p... 61.6 7e-18 gi|50659865|gb|AAT80652.1| lipid transfer protein precursor [... 57.0 7e-18 gi|50659861|gb|AAT80650.1| lipid transfer protein precursor [... 57.0 7e-18 gi|263935|gb|AAA03284.1| CW21=non-specific lipid transfer pro... 61.6 8e-18 gi|14423815|sp|Q9M5X8|NLTP_PRUAV Nonspecific lipid-transfer p... 58.5 1e-17 gi|587446|emb|CAA85484.1| lipid transfer protein precursor [H... 61.2 1e-17 gi|6684055|gb|AAF23460.1|AF208834_1 non-specific lipid transfer 60.5 1e-17 gi|7404406|sp|P81651|NLTP1_PRUAR Nonspecific lipid-transfer p... 56.2 1e-17 gi|49659947|gb|AAT68264.1| lipid transfer protein [Nicotiana gla 59.7 2e-17 gi|2497744|sp|Q42842|NLT43_HORVU Nonspecific lipid-transfer p... 60.5 2e-17 gi|6225765|sp|Q43875|NLT42_HORVU Nonspecific lipid-transfer p... 60.5 2e-17 gi|59805085|gb|AAX08122.1| lipid transfer protein III [Capsicum 60.1 2e-17 gi|642017|gb|AAA86694.1| phospholipid transfer protein precursor 60.8 2e-17 gi|50659891|gb|AAT80665.1| lipid transfer protein precursor [Mal 55.5 2e-17 gi|16904376|gb|AAL30846.1|AF439446_1 lipid transfer protein [Set 57.8 3e-17 gi|55774584|gb|AAV64877.1| non-specific lipid transfer protein [ 57.4 3e-17 gi|13507262|gb|AAK28533.1|AF329829_1 lipid transfer protein prec 54.3 4e-17 gi|9297015|sp|P82534|NLTP1_PRUDO Nonspecific lipid-transfer p... 55.5 4e-17 gi|50659887|gb|AAT80663.1| lipid transfer protein precursor [... 57.0 5e-17 gi|54793477|gb|AAV40850.1| lipid transfer protein 1 precursor [P 55.8 8e-17 gi|60735408|gb|AAX35806.1| lipid transfer protein 1 precursor [L 54.3 8e-17 gi|17974195|emb|CAB96876.2| pru p 1 [Prunus persica] 55.8 8e-17 gi|83754020|pdb|2ALG|A Chain A, Crystal Structure Of Peach Pr... 55.8 8e-17 gi|56713113|emb|CAH04988.1| type 1 non-specific lipid transfe... 58.2 1e-16 gi|11037708|gb|AAG27707.1|AF302788_1 lipid transfer protein p... 54.3 1e-16 gi|84617221|emb|CAH69206.1| type 1 non specific lipid transfe... 58.2 1e-16 gi|21952514|gb|AAM82606.1| putative non-specific lipid transf... 55.5 1e-16 gi|21952516|gb|AAM82607.1|AF525363_1 putative non-specific li... 55.5 1e-16 gi|56713117|emb|CAH04990.1| type 1 non-specific lipid transfe... 58.2 1e-16 gi|92899104|gb|ABE94532.1| Plant lipid transfer protein/Par alle 56.2 2e-16 gi|118490066|gb|ABK96812.1| lipid transfer protein isoform 1.2 [ 54.3 2e-16 gi|109255207|gb|ABG27026.1| phosophlipid protein [Gymnadenia con 52.8 3e-16 gi|115485277|ref|NP_001067782.1| Os11g0427800 [Oryza sativa (... 52.4 3e-16 gi|94315719|gb|ABF14722.1| non-specific lipid transfer protei... 57.0 3e-16 gi|3287877|sp|P81402|NLTP1_PRUPE Nonspecific lipid-transfer p... 55.8 3e-16 gi|8050537|gb|AAF71695.1|AF198168_1 phospholipid transfer protei 57.0 4e-16
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 16, 2007 5:53 PM Number of letters in database: 101,065,385 Number of sequences in database: 283,397 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283397 Number of Hits to DB: 400 Number of extensions: 2 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 524 Length of database: 101065385 Length adjustment: 105 Effective length of query: 419 Effective length of database: 71308700 Effective search space: 4920300300 Effective search space used: 4920300300 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 63 (28.9 bits)