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BLASTX 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman 
(1997), "Gapped BLAST and PSI-BLAST: a new generation of 
protein database search programs", Nucleic Acids Res. 25:3389-3402.

RID: 1169016223-6771-209125187697.BLASTQ4


Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
           4,460,989 sequences; 1,533,424,333 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Query=  Contig396
Length=501


Distribution of 83 Blast Hits on the Query Sequence



                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|15230734|ref|NP_187304.1|  RNA binding [Arabidopsis thalian...  79.7    5e-15 UniGene infoGene info
gi|4337176|gb|AAD18097.1|  T31J12.4 [Arabidopsis thaliana]         77.0    3e-14
gi|42561856|ref|NP_172403.3|  RNA binding [Arabidopsis thalian...  77.0    3e-14 UniGene infoGene info
gi|51971128|dbj|BAD44256.1|  unknown protein [Arabidopsis thalian  77.0    3e-14 UniGene info
gi|15221452|ref|NP_172123.1|  RNA binding [Arabidopsis thalian...  65.5    1e-10 UniGene infoGene info
gi|92874667|gb|ABE82901.1|  Agenet [Medicago truncatula]           63.9    3e-10
gi|52353666|gb|AAU44232.1|  hypothetical protein [Oryza sativa (j  63.9    3e-10
gi|15226533|ref|NP_182245.1|  RNA binding [Arabidopsis thalian...  55.5    1e-07 UniGene infoGene info
gi|6554201|gb|AAF16647.1|AC011661_25  T23J18.9 [Arabidopsis thali  52.8    6e-07
gi|15220379|ref|NP_172609.1|  RNA binding [Arabidopsis thaliana]   52.8    6e-07 UniGene infoGene info
gi|115476528|ref|NP_001061860.1|  Os08g0431100 [Oryza sativa (...  52.0    1e-06 Gene info
gi|37805921|dbj|BAC99338.1|  unknown protein [Oryza sativa (ja...  52.0    1e-06 Gene info
gi|15222723|ref|NP_173976.1|  RNA binding [Arabidopsis thalian...  51.6    1e-06 UniGene infoGene info
gi|6899940|emb|CAB71890.1|  putative protein [Arabidopsis thalian  50.8    2e-06
gi|30695584|ref|NP_191789.2|  RNA binding [Arabidopsis thalian...  50.8    2e-06 UniGene infoGene info
gi|15237832|ref|NP_197769.1|  RNA binding [Arabidopsis thalian...  49.3    7e-06 UniGene infoGene info
gi|62732801|gb|AAX94920.1|  Agenet domain, putative [Oryza sat...  48.5    1e-05
gi|30697711|ref|NP_177025.2|  DNA binding / RNA binding [Arabi...  47.8    2e-05 UniGene infoGene info
gi|5734720|gb|AAD49985.1|AC008075_18  Contains PF|01426 BAH (b...  47.8    2e-05
gi|89257526|gb|ABD65016.1|  Agenet domain containing protein [Bra  47.4    3e-05
gi|92867379|gb|ABE77691.1|  Agenet [Medicago truncatula] >gi|9...  47.0    4e-05
gi|92874017|gb|ABE82342.1|  Agenet [Medicago truncatula]           46.6    5e-05
gi|92867381|gb|ABE77693.1|  Agenet [Medicago truncatula] >gi|9...  44.7    2e-04
gi|51091512|dbj|BAD36250.1|  agenet domain-containing protein ...  43.1    5e-04
gi|22327858|ref|NP_200371.2|  DNA binding / RNA binding [Arabi...  42.7    7e-04 UniGene infoGene info
gi|77551450|gb|ABA94247.1|  Agenet domain containing protein [...  42.7    7e-04
gi|9758594|dbj|BAB09227.1|  unnamed protein product [Arabidopsis   42.7    7e-04
gi|92894759|gb|ABE92374.1|  Cyclin-like F-box; Agenet [Medicago t  42.4    9e-04
gi|110737699|dbj|BAF00788.1|  hypothetical protein [Arabidopsis t  41.6    0.001
gi|92879072|gb|ABE85345.1|  Cyclin-like F-box; Agenet [Medicago t  41.2    0.002
gi|15218770|ref|NP_171829.1|  RNA binding [Arabidopsis thalian...  40.0    0.004 UniGene infoGene info
gi|22328747|ref|NP_193464.2|  ATG2484-1; RNA binding [Arabidop...  37.0    0.037 UniGene infoGene info
gi|87241252|gb|ABD33110.1|  protein T31J12.4 [imported] - Arab...  37.0    0.037
gi|2664214|emb|CAA10906.1|  G2484-1 [Arabidopsis thaliana]         37.0    0.037 UniGene info
gi|115479095|ref|NP_001063141.1|  Os09g0408500 [Oryza sativa (...  36.6    0.048 Gene info
gi|51091514|dbj|BAD36252.1|  agenet domain-containing protein ...  36.6    0.048
gi|15237826|ref|NP_197767.1|  RNA binding [Arabidopsis thalian...  36.2    0.062 UniGene infoGene info
gi|15237825|ref|NP_197766.1|  RNA binding [Arabidopsis thalian...  35.4    0.11  UniGene infoGene info
gi|110739535|dbj|BAF01676.1|  hypothetical protein [Arabidopsis t  35.0    0.14 
gi|115468804|ref|NP_001058001.1|  Os06g0600700 [Oryza sativa (...  34.3    0.24  Gene info
gi|87241249|gb|ABD33107.1|  Cyclin-like F-box; Agenet [Medicago t  34.3    0.24 
gi|50725037|dbj|BAD32839.1|  agenet domain-containing protein-...  34.3    0.24 
gi|115483404|ref|NP_001065372.1|  Os10g0559600 [Oryza sativa (...  33.9    0.31  Gene info
gi|110289566|gb|ABG66256.1|  Agenet domain containing protein,...  33.9    0.31 
gi|57899247|dbj|BAD87492.1|  hypothetical protein [Oryza sativ...  33.5    0.40 
gi|78708589|gb|ABB47564.1|  Agenet domain containing protein [...  33.5    0.40 
gi|115444929|ref|NP_001046244.1|  Os02g0204500 [Oryza sativa (...  33.1    0.53  Gene info
gi|46390520|dbj|BAD16008.1|  putative agenet domain-containing...  33.1    0.53  Gene info
gi|115473271|ref|NP_001060234.1|  Os07g0607300 [Oryza sativa (...  32.3    0.90  Gene info
gi|50508663|dbj|BAD31149.1|  putative agenet domain-containing...  32.3    0.90 
gi|42573127|ref|NP_974660.1|  RNA binding [Arabidopsis thalian...  32.0    1.2   UniGene infoGene info
gi|15236804|ref|NP_194970.1|  RNA binding [Arabidopsis thalian...  32.0    1.2   UniGene infoGene info
gi|15224760|ref|NP_180130.1|  RNA binding [Arabidopsis thalian...  31.6    1.5   UniGene infoGene info
gi|30697709|ref|NP_849862.1|  DNA binding / RNA binding [Arabidop  31.6    1.5   UniGene infoGene info
gi|92895175|gb|ABE92607.1|  Agenet [Medicago truncatula]           30.8    2.6  
gi|92878850|gb|ABE85254.1|  Cyclin-like F-box; Agenet [Medicago t  30.4    3.4  
gi|15237720|ref|NP_200669.1|  DNA binding / N-acetyltransferas...  30.4    3.4   UniGene infoGene info
gi|8843783|dbj|BAA97331.1|  unnamed protein product [Arabidopsis   30.4    3.4  
gi|18873854|gb|AAL79800.1|AC079874_23  unknown protein [Oryza ...  30.0    4.5   Gene info
gi|2808464|emb|CAA11428.1|  alpha-hydroxynitrile lyase [Manihot e  29.6    5.8  
gi|2245092|emb|CAB10514.1|  hypothetical protein [Arabidopsis ...  29.6    5.8  
gi|110737386|dbj|BAF00637.1|  hypothetical protein [Arabidopsis t  29.3    7.6  
gi|92872866|gb|ABE81401.1|  Agenet [Medicago truncatula]           28.9    10.0 
Alignments
>gi|15230734|ref|NP_187304.1| UniGene infoGene info RNA binding [Arabidopsis thaliana] gi|12322681|gb|AAG51333.1|AC020580_13 Gene info hypothetical protein; 66083-64412 [Arabidopsis thaliana] Length=466 Score = 79.7 bits (195), Expect = 5e-15 Identities = 44/82 (53%), Positives = 53/82 (64%), Gaps = 2/82 (2%) Frame = +1 Query 10 LREEAYASYIRphpphaehaypy-QLLENVDAWYNDGWWIGQIVKVFTG-WRYTVYFRTT 183 L+EEA S IRP PP +L E VDAWYN+GWW G++ K+ RY VYF+TT Sbjct 382 LKEEARGSDIRPPPPPLIPKGYRYELYELVDAWYNEGWWSGRVYKINNNKTRYGVYFQTT 441 Query 184 NEELEFEHGDLRPHQEWINGKW 249 +E LEF + DLRP Q W NGKW Sbjct 442 DESLEFAYNDLRPCQVWRNGKW 463 Score = 64.7 bits (156), Expect = 2e-10 Identities = 29/66 (43%), Positives = 43/66 (65%), Gaps = 2/66 (3%) Frame = +1 Query 94 VDAWYNDGWWIGQIVKVFTGW--RYTVYFRTTNEELEFEHGDLRPHQEWINGKWVIASRD 267 VDAW+N WW ++ KV G +Y+V+ +T EE + +LRPH++WING+WVI S+ Sbjct 248 VDAWFNKRWWTSRVSKVLGGGSNKYSVFIISTGEETTILNFNLRPHKDWINGQWVIPSKV 307 Query 268 AS*VTE 285 + V E Sbjct 308 LTDVPE 313 Score = 40.4 bits (93), Expect = 0.003 Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%) Frame = +1 Query 109 NDGWWI-GQIVKVFTGWRYTVYFRTTNE-ELEFEHGDLRPHQEWINGKWVIASRDAS*VT 282 ++G W+ G + V RY V F+ N E+E + +LR H+EW++G WV + S + Sbjct 91 SEGCWVRGNVTTVLEDSRYIVEFKGENRPEIEVDQFNLRLHREWLDGGWVPSLLQQSNFS 150 Query 283 EGLA 294 E A Sbjct 151 ESTA 154 >gi|4337176|gb|AAD18097.1| T31J12.4 [Arabidopsis thaliana] Length=514 Score = 77.0 bits (188), Expect = 3e-14 Identities = 40/81 (49%), Positives = 50/81 (61%), Gaps = 0/81 (0%) Frame = +1 Query 10 LREEAYASYIRphpphaehaypyQLLENVDAWYNDGWWIGQIVKVFTGWRYTVYFRTTNE 189 LREE S IRP P + P++ + V+A YNDGWW+G I KV Y V F+ T E Sbjct 427 LREEVNVSRIRPLPLESVMVSPFERHDKVNALYNDGWWVGVIRKVLAKSSYLVLFKNTQE 486 Query 190 ELEFEHGDLRPHQEWINGKWV 252 L+F H LR HQEWI+GKW+ Sbjct 487 LLKFHHSQLRLHQEWIDGKWI 507 Score = 68.2 bits (165), Expect = 1e-11 Identities = 24/54 (44%), Positives = 39/54 (72%), Gaps = 0/54 (0%) Frame = +1 Query 88 ENVDAWYNDGWWIGQIVKVFTGWRYTVYFRTTNEELEFEHGDLRPHQEWINGKW 249 E VDA+YNDGWW G + +V +++V+FR++ E++ F +LR H+EW++G W Sbjct 98 EEVDAFYNDGWWEGDVTEVLDDGKFSVFFRSSKEQIRFRKDELRFHREWVDGAW 151 Score = 57.0 bits (136), Expect = 3e-08 Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 0/54 (0%) Frame = +1 Query 88 ENVDAWYNDGWWIGQIVKVFTGWRYTVYFRTTNEELEFEHGDLRPHQEWINGKW 249 + ++A+YNDGWW+G ++ +YFR + E++ F LR H++W++G W Sbjct 293 DKINAFYNDGWWVGVVIDGMKHGTVGIYFRQSQEKMRFGRQGLRLHKDWVDGTW 346 >gi|42561856|ref|NP_172403.3| UniGene infoGene info RNA binding [Arabidopsis thaliana] gi|63147400|gb|AAY34173.1| UniGene infoGene info At1g09320 [Arabidopsis thaliana] Length=517 Score = 77.0 bits (188), Expect = 3e-14 Identities = 40/81 (49%), Positives = 50/81 (61%), Gaps = 0/81 (0%) Frame = +1 Query 10 LREEAYASYIRphpphaehaypyQLLENVDAWYNDGWWIGQIVKVFTGWRYTVYFRTTNE 189 LREE S IRP P + P++ + V+A YNDGWW+G I KV Y V F+ T E Sbjct 429 LREEVNVSRIRPLPLESVMVSPFERHDKVNALYNDGWWVGVIRKVLAKSSYLVLFKNTQE 488 Query 190 ELEFEHGDLRPHQEWINGKWV 252 L+F H LR HQEWI+GKW+ Sbjct 489 LLKFHHSQLRLHQEWIDGKWI 509 Score = 68.2 bits (165), Expect = 1e-11 Identities = 24/54 (44%), Positives = 39/54 (72%), Gaps = 0/54 (0%) Frame = +1 Query 88 ENVDAWYNDGWWIGQIVKVFTGWRYTVYFRTTNEELEFEHGDLRPHQEWINGKW 249 E VDA+YNDGWW G + +V +++V+FR++ E++ F +LR H+EW++G W Sbjct 123 EEVDAFYNDGWWEGDVTEVLDDGKFSVFFRSSKEQIRFRKDELRFHREWVDGAW 176 Score = 57.0 bits (136), Expect = 3e-08 Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 0/54 (0%) Frame = +1 Query 88 ENVDAWYNDGWWIGQIVKVFTGWRYTVYFRTTNEELEFEHGDLRPHQEWINGKW 249 + ++A+YNDGWW+G ++ +YFR + E++ F LR H++W++G W Sbjct 295 DKINAFYNDGWWVGVVIDGMKHGTVGIYFRQSQEKMRFGRQGLRLHKDWVDGTW 348 >gi|51971128|dbj|BAD44256.1| UniGene info unknown protein [Arabidopsis thaliana] Length=517 Score = 77.0 bits (188), Expect = 3e-14 Identities = 40/81 (49%), Positives = 50/81 (61%), Gaps = 0/81 (0%) Frame = +1 Query 10 LREEAYASYIRphpphaehaypyQLLENVDAWYNDGWWIGQIVKVFTGWRYTVYFRTTNE 189 LREE S IRP P + P++ + V+A YNDGWW+G I KV Y V F+ T E Sbjct 429 LREEVNVSRIRPLPLESVMVSPFERHDKVNALYNDGWWVGVIRKVLAKSSYLVLFKNTQE 488 Query 190 ELEFEHGDLRPHQEWINGKWV 252 L+F H LR HQEWI+GKW+ Sbjct 489 LLKFHHSQLRLHQEWIDGKWI 509 Score = 68.2 bits (165), Expect = 1e-11 Identities = 24/54 (44%), Positives = 39/54 (72%), Gaps = 0/54 (0%) Frame = +1 Query 88 ENVDAWYNDGWWIGQIVKVFTGWRYTVYFRTTNEELEFEHGDLRPHQEWINGKW 249 E VDA+YNDGWW G + +V +++V+FR++ E++ F +LR H+EW++G W Sbjct 123 EEVDAFYNDGWWEGDVTEVLDDGKFSVFFRSSKEQIRFRKDELRFHREWVDGAW 176 Score = 57.0 bits (136), Expect = 3e-08 Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 0/54 (0%) Frame = +1 Query 88 ENVDAWYNDGWWIGQIVKVFTGWRYTVYFRTTNEELEFEHGDLRPHQEWINGKW 249 + ++A+YNDGWW+G ++ +YFR + E++ F LR H++W++G W Sbjct 295 DKINAFYNDGWWVGVVIDGMKHGTVGIYFRQSQEKMRFGRQGLRLHKDWVDGTW 348 >gi|15221452|ref|NP_172123.1| UniGene infoGene info RNA binding [Arabidopsis thaliana] gi|8927671|gb|AAF82162.1|AC068143_4 Gene info Contains similarity to a hypothetical protein T31J12.4 gi|4337176 from Arabidopsis thaliana BAC T31J12 gb|AC006416 Length=134 Score = 65.5 bits (158), Expect = 1e-10 Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 1/55 (1%) Frame = +1 Query 88 ENVDAWYNDGWWIGQIVKVFTGWRYTVYFRTTNEELEFEHGDLRPHQEWINGKWV 252 + VDA+ DGWW+G++ V Y+VYF TT+EELE+ LR H EW+NG WV Sbjct 79 DKVDAFDKDGWWVGEVTAVRRNI-YSVYFSTTDEELEYPLYSLRKHHEWVNGSWV 132 >gi|92874667|gb|ABE82901.1| Agenet [Medicago truncatula] Length=147 Score = 63.9 bits (154), Expect = 3e-10 Identities = 35/87 (40%), Positives = 52/87 (59%), Gaps = 5/87 (5%) Frame = +1 Query 10 LREEAYASYIRphpphaehaypyQLLENVDAWYNDGWWIGQIV--KVFT---GWRYTVYF 174 L E Y +RP PP + + +QL + VDA++NDGWW+GQI K+ T G Y VYF Sbjct 59 LVETIYPYELRPTPPRVRNPHEFQLNQKVDAFHNDGWWVGQITSEKIITAEEGHCYWVYF 118 Query 175 RTTNEELEFEHGDLRPHQEWINGKWVI 255 T++E + + +R H EW G+W++ Sbjct 119 STSSETNYYRYDQIRVHHEWFGGEWIL 145 >gi|52353666|gb|AAU44232.1| hypothetical protein [Oryza sativa (japonica cultivar-group)] Length=448 Score = 63.9 bits (154), Expect = 3e-10 Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 6/86 (6%) Frame = +1 Query 4 TRLREEAYASYIRphpphaehaypyQLLENVDAWYNDGWWIGQIVKVFTGWRYTVYFRTT 183 T L E ++RP PP + LL+ VDA +NDGWW+G I KV +G R++ Sbjct 364 TPLTEAIEVQHVRPCPPDIPVTSGFNLLDEVDACWNDGWWVGVISKVNSG------DRSS 417 Query 184 NEELEFEHGDLRPHQEWINGKWVIAS 261 EE EF H LR H +W+ G+W+ AS Sbjct 418 TEETEFGHEQLRLHCDWVGGRWMRAS 443 Score = 51.2 bits (121), Expect = 2e-06 Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 3/56 (5%) Frame = +1 Query 94 VDAWYNDGWWIGQIV---KVFTGWRYTVYFRTTNEELEFEHGDLRPHQEWINGKWV 252 VDA+ WW+G + + G R V F T E +EF+ D+RPH EW+ G+W+ Sbjct 98 VDAFKGGAWWVGVALGGGRAAAGGRVAVCFPETREVVEFDAADVRPHLEWVAGEWL 153 Score = 40.8 bits (94), Expect = 0.003 Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 0/54 (0%) Frame = +1 Query 88 ENVDAWYNDGWWIGQIVKVFTGWRYTVYFRTTNEELEFEHGDLRPHQEWINGKW 249 + V+ + +GWW+G I V +RYT + +E++ + LR +W + +W Sbjct 239 DEVEGFQGNGWWLGVITDVHPEFRYTFKAAHSGKEIQLDQKALRLRYDWTHDQW 292 >gi|15226533|ref|NP_182245.1| UniGene infoGene info RNA binding [Arabidopsis thaliana] gi|2275201|gb|AAB63823.1| Gene info unknown protein [Arabidopsis thaliana] Length=701 Score = 55.5 bits (132), Expect = 1e-07 Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 0/53 (0%) Frame = +1 Query 94 VDAWYNDGWWIGQIVKVFTGWRYTVYFRTTNEELEFEHGDLRPHQEWINGKWV 252 VDA + DGWW G I+K ++ VY+ + + +EFE LRPH W KW+ Sbjct 86 VDADHKDGWWTGVIIKKLENGKFWVYYDSPPDIIEFERNQLRPHLRWSGWKWL 138 Score = 34.7 bits (78), Expect = 0.18 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 0/57 (0%) Frame = +1 Query 79 QLLENVDAWYNDGWWIGQIVKVFTGWRYTVYFRTTNEELEFEHGDLRPHQEWINGKW 249 +L++ V+ + W G + V Y V T EE +H DLRP + W +G W Sbjct 226 ELMDRVEVFRGSVWRQGLVRGVLDHNCYMVCLVVTKEEPVVKHSDLRPCKVWEDGVW 282 >gi|6554201|gb|AAF16647.1|AC011661_25 T23J18.9 [Arabidopsis thaliana] Length=636 Score = 52.8 bits (125), Expect = 6e-07 Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 0/53 (0%) Frame = +1 Query 94 VDAWYNDGWWIGQIVKVFTGWRYTVYFRTTNEELEFEHGDLRPHQEWINGKWV 252 VDA+ DGWW G +VK ++ VYF + ++FE LR H +W KW+ Sbjct 88 VDAYLKDGWWTGVVVKTMEDEKFLVYFDCPPDIIQFEKKKLRVHLDWTGFKWI 140 Score = 45.8 bits (107), Expect = 8e-05 Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 0/57 (0%) Frame = +1 Query 79 QLLENVDAWYNDGWWIGQIVKVFTGWRYTVYFRTTNEELEFEHGDLRPHQEWINGKW 249 +LL++V+A+ W G + + RY V F T E +F H D+RP EW +G W Sbjct 218 ELLDHVEAFSGFEWRQGVVRGIVFEGRYMVSFGATKEASQFNHSDIRPPMEWEDGVW 274 >gi|15220379|ref|NP_172609.1| UniGene infoGene info RNA binding [Arabidopsis thaliana] Length=604 Score = 52.8 bits (125), Expect = 6e-07 Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 0/53 (0%) Frame = +1 Query 94 VDAWYNDGWWIGQIVKVFTGWRYTVYFRTTNEELEFEHGDLRPHQEWINGKWV 252 VDA+ DGWW G +VK ++ VYF + ++FE LR H +W KW+ Sbjct 88 VDAYLKDGWWTGVVVKTMEDEKFLVYFDCPPDIIQFEKKKLRVHLDWTGFKWI 140 Score = 45.8 bits (107), Expect = 8e-05 Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 0/57 (0%) Frame = +1 Query 79 QLLENVDAWYNDGWWIGQIVKVFTGWRYTVYFRTTNEELEFEHGDLRPHQEWINGKW 249 +LL++V+A+ W G + + RY V F T E +F H D+RP EW +G W Sbjct 218 ELLDHVEAFSGFEWRQGVVRGIVFEGRYMVSFGATKEASQFNHSDIRPPMEWEDGVW 274 >gi|115476528|ref|NP_001061860.1| Gene info Os08g0431100 [Oryza sativa (japonica cultivar-group)] gi|113623829|dbj|BAF23774.1| Gene info Os08g0431100 [Oryza sativa (japonica cultivar-group)] Length=596 Score = 52.0 bits (123), Expect = 1e-06 Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 0/52 (0%) Frame = +1 Query 94 VDAWYNDGWWIGQIVKVFTGWRYTVYFRTTNEELEFEHGDLRPHQEWINGKW 249 VDAW+N GWW G +++ R VYF + +F DLR +EW GKW Sbjct 398 VDAWWNSGWWEGIVLQQGNDRRLQVYFPGEKQIADFCEDDLRHSREWAGGKW 449 >gi|37805921|dbj|BAC99338.1| Gene info unknown protein [Oryza sativa (japonica cultivar-group)] gi|38175479|dbj|BAD01176.1| Gene info unknown protein [Oryza sativa (japonica cultivar-group)] Length=684 Score = 52.0 bits (123), Expect = 1e-06 Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 0/52 (0%) Frame = +1 Query 94 VDAWYNDGWWIGQIVKVFTGWRYTVYFRTTNEELEFEHGDLRPHQEWINGKW 249 VDAW+N GWW G +++ R VYF + +F DLR +EW GKW Sbjct 486 VDAWWNSGWWEGIVLQQGNDRRLQVYFPGEKQIADFCEDDLRHSREWAGGKW 537 >gi|15222723|ref|NP_173976.1| UniGene infoGene info RNA binding [Arabidopsis thaliana] gi|9797745|gb|AAF98563.1|AC013427_6 Gene info Contains similarity to an unknown protein T8I13.7 gi|2275201 from Arabidopsis thaliana BAC T8I13 gb|AC002337. EST gb|AV561945 comes from this gene gi|26450187|dbj|BAC42212.1| UniGene infoGene info unknown protein [Arabidopsis thaliana] Length=695 Score = 51.6 bits (122), Expect = 1e-06 Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 0/53 (0%) Frame = +1 Query 94 VDAWYNDGWWIGQIVKVFTGWRYTVYFRTTNEELEFEHGDLRPHQEWINGKWV 252 VDA + DGWW G +VK Y VYF + ++FE LR H W G W+ Sbjct 90 VDADHKDGWWTGVVVKKMEDDNYLVYFDLPPDIIQFERKQLRTHLIWTGGTWI 142 Score = 50.8 bits (120), Expect = 2e-06 Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 0/56 (0%) Frame = +1 Query 82 LLENVDAWYNDGWWIGQIVKVFTGWRYTVYFRTTNEELEFEHGDLRPHQEWINGKW 249 LLE+V+ + GW GQ+ K+ + RYTV T +E H DLRP W +G W Sbjct 228 LLESVETFSGLGWHKGQVRKILSENRYTVRLEATQQESTIRHSDLRPFMVWEDGVW 283 >gi|6899940|emb|CAB71890.1| putative protein [Arabidopsis thaliana] Length=708 Score = 50.8 bits (120), Expect = 2e-06 Identities = 32/86 (37%), Positives = 39/86 (45%), Gaps = 5/86 (5%) Frame = +1 Query 79 QLLENVDAWYNDGWWIGQIVKVFTGWRYTVYFRTTNEELEFEHGDLRPHQEWINGKW--- 249 +L+ENVDA GW G + KV G RY V E EF LRP EW +G W Sbjct 231 KLMENVDALVESGWCPGVVSKVLAGKRYAVDLGPNRESKEFSRLQLRPSIEWKDGIWHRK 290 Query 250 --VIASRDAS*VTEGLATILSQSLTV 321 V S ++S E A +TV Sbjct 291 EKVSGSEESSHAVEETAASTRIRITV 316 Score = 47.4 bits (111), Expect = 3e-05 Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 0/52 (0%) Frame = +1 Query 94 VDAWYNDGWWIGQIVKVFTGWRYTVYFRTTNEELEFEHGDLRPHQEWINGKW 249 VDA Y GW G +VKV R+ VY R + +E DLRPH W + +W Sbjct 97 VDAAYKGGWCSGSVVKVLGNRRFLVYLRFQPDVIELLRKDLRPHFVWKDEEW 148 >gi|30695584|ref|NP_191789.2| UniGene infoGene info RNA binding [Arabidopsis thaliana] gi|25082999|gb|AAN72030.1| UniGene infoGene info putative protein [Arabidopsis thaliana] Length=722 Score = 50.8 bits (120), Expect = 2e-06 Identities = 32/86 (37%), Positives = 39/86 (45%), Gaps = 5/86 (5%) Frame = +1 Query 79 QLLENVDAWYNDGWWIGQIVKVFTGWRYTVYFRTTNEELEFEHGDLRPHQEWINGKW--- 249 +L+ENVDA GW G + KV G RY V E EF LRP EW +G W Sbjct 231 KLMENVDALVESGWCPGVVSKVLAGKRYAVDLGPNRESKEFSRLQLRPSIEWKDGIWHRK 290 Query 250 --VIASRDAS*VTEGLATILSQSLTV 321 V S ++S E A +TV Sbjct 291 EKVSGSEESSHAVEETAASTRIRITV 316 Score = 47.4 bits (111), Expect = 3e-05 Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 0/52 (0%) Frame = +1 Query 94 VDAWYNDGWWIGQIVKVFTGWRYTVYFRTTNEELEFEHGDLRPHQEWINGKW 249 VDA Y GW G +VKV R+ VY R + +E DLRPH W + +W Sbjct 97 VDAAYKGGWCSGSVVKVLGNRRFLVYLRFQPDVIELLRKDLRPHFVWKDEEW 148 >gi|15237832|ref|NP_197769.1| UniGene infoGene info RNA binding [Arabidopsis thaliana] gi|10176847|dbj|BAB10053.1| Gene info unnamed protein product [Arabidopsis thaliana] Length=552 Score = 49.3 bits (116), Expect = 7e-06 Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 4/60 (6%) Frame = +1 Query 94 VDAWYNDGWWIGQIVKVFTGWRYTVYFRTTNEELEFEHGDLRPHQEWINGK----WVIAS 261 VDA Y D WW G +VKV ++ V F + + ++F+ LRP EW++ K W+I S Sbjct 90 VDADYKDAWWAGFVVKVIDDDKFWVCFDSPPDIIQFDRNHLRPTLEWVDEKIYSWWIIGS 149 Score = 35.4 bits (80), Expect = 0.11 Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 14/71 (19%) Frame = +1 Query 106 YNDG--WWIGQIVK--------VFTGWRYTVYFRTTNEELEFEHGDLRPHQEWINGKWVI 255 Y+DG W G++VK +F W T+ T ++L F+ DLRP + W +G W Sbjct 247 YHDGIGWRQGRVVKSEGGVMGSLFQNW-CTLLLEATKKQLMFKQSDLRPLRVWEDGVW-- 303 Query 256 ASRDAS*VTEG 288 +R++S +T+G Sbjct 304 KTRESS-LTQG 313 >gi|62732801|gb|AAX94920.1| Agenet domain, putative [Oryza sativa (japonica cultivar-group)] Length=1121 Score = 48.5 bits (114), Expect = 1e-05 Identities = 38/103 (36%), Positives = 52/103 (50%), Gaps = 16/103 (15%) Frame = +1 Query 1 GTRLREEAYASYIRphpphaehaypyQ------LLENVDAWYNDGWWIG---------QI 135 G LREEA A +RP PP A + + V+A++N+GWW G + Sbjct 85 GAALREEARARDVRPQPPPVAGAPGAPGAGGFAMHDMVEAFHNEGWWSGVVTGLPLPLDV 144 Query 136 VKVFTGWR-YTVYFRTTNEELEFEHGDLRPHQEWINGKWVIAS 261 + V R YTV F T+ E +EFE LRPH+ + G WV A+ Sbjct 145 LPVDPRRRVYTVAFPTSREVMEFEEAALRPHRVFRRGSWVPAA 187 Score = 28.9 bits (63), Expect = 10.0 Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 12/66 (18%) Frame = +1 Query 91 NVDAWYNDGWWIGQIVKVFTGW---RYTVYFRTTN---------EELEFEHGDLRPHQEW 234 +V+ ++ WW G I++ +G Y V ++ ++L E+ LRP EW Sbjct 272 HVEVFHEGSWWPGIILETSSGVFGKMYVVKLKSYTTGMDNVDGVDKLTVENTKLRPQFEW 331 Query 235 INGKWV 252 KW+ Sbjct 332 DGRKWM 337 >gi|30697711|ref|NP_177025.2| UniGene infoGene info DNA binding / RNA binding [Arabidopsis thaliana] gi|22135896|gb|AAM91530.1| UniGene infoGene info unknown protein [Arabidopsis thaliana] gi|30725466|gb|AAP37755.1| UniGene infoGene info At1g68580 [Arabidopsis thaliana] Length=648 Score = 47.8 bits (112), Expect = 2e-05 Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 0/53 (0%) Frame = +1 Query 94 VDAWYNDGWWIGQIVKVFTGWRYTVYFRTTNEELEFEHGDLRPHQEWINGKWV 252 VD W+ DGWW G +V+ + ++ VY + F DLR +EW++ +W+ Sbjct 459 VDVWWCDGWWEGIVVQEVSEEKFEVYLPGEKKMSAFHRNDLRQSREWLDDEWL 511 >gi|5734720|gb|AAD49985.1|AC008075_18 Contains PF|01426 BAH (bromo-adjacent homology) domain. ESTs gb|N96349, gb|T42710, gb|H77084, gb|AA395147 and gb|AA605500 come from this gene. [Arabidopsis thaliana] Length=625 Score = 47.8 bits (112), Expect = 2e-05 Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 0/53 (0%) Frame = +1 Query 94 VDAWYNDGWWIGQIVKVFTGWRYTVYFRTTNEELEFEHGDLRPHQEWINGKWV 252 VD W+ DGWW G +V+ + ++ VY + F DLR +EW++ +W+ Sbjct 436 VDVWWCDGWWEGIVVQEVSEEKFEVYLPGEKKMSAFHRNDLRQSREWLDDEWL 488 >gi|89257526|gb|ABD65016.1| Agenet domain containing protein [Brassica oleracea] Length=1087 Score = 47.4 bits (111), Expect = 3e-05 Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 0/53 (0%) Frame = +1 Query 94 VDAWYNDGWWIGQIVKVFTGWRYTVYFRTTNEELEFEHGDLRPHQEWINGKWV 252 VDA++N+GWW G I+ + +YF + + F LRP WI +WV Sbjct 95 VDAYFNNGWWTGLIIVERPDGSFFIYFDDPPDIMRFIRSQLRPPANWIGSEWV 147 Score = 39.7 bits (91), Expect = 0.006 Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 1/60 (1%) Frame = +1 Query 82 LLENVDAWYNDGWWIGQIVKVFTGWRYTVYFRTTNEELEFEHGDLRPHQEWIN-GKWVIA 258 L + V+ GW G+++++ Y VYF T E+ F + ++R EW++ G W+ A Sbjct 200 LNDYVEVVVTHGWRKGRVMEILLENNYKVYFTATKEDAVFNYTEIRLSMEWLDGGSWIRA 259 >gi|92867379|gb|ABE77691.1| Agenet [Medicago truncatula] gi|92874027|gb|ABE82352.1| Agenet [Medicago truncatula] Length=146 Score = 47.0 bits (110), Expect = 4e-05 Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 4/62 (6%) Frame = +1 Query 79 QLLENVDAWYNDGWWIGQI----VKVFTGWRYTVYFRTTNEELEFEHGDLRPHQEWINGK 246 +L + VD + NDGWW+G+I + + + Y+VYF ++ + + +R HQE + G Sbjct 82 ELNQKVDVFDNDGWWVGEIASEKILMEKSYYYSVYFDYCHQTIYYPCDQIRVHQELVWGD 141 Query 247 WV 252 W+ Sbjct 142 WI 143 >gi|92874017|gb|ABE82342.1| Agenet [Medicago truncatula] Length=146 Score = 46.6 bits (109), Expect = 5e-05 Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 4/62 (6%) Frame = +1 Query 79 QLLENVDAWYNDGWWIGQI----VKVFTGWRYTVYFRTTNEELEFEHGDLRPHQEWINGK 246 +L + VD + NDGWW+G+I + + + Y+VYF ++ + + +R HQE + G Sbjct 82 ELNQKVDVFDNDGWWVGKIASEKILMEKSYYYSVYFDYCHQTIYYPCDQIRVHQELVWGD 141 Query 247 WV 252 W+ Sbjct 142 WI 143 >gi|92867381|gb|ABE77693.1| Agenet [Medicago truncatula] gi|92874025|gb|ABE82350.1| Agenet [Medicago truncatula] Length=146 Score = 44.7 bits (104), Expect = 2e-04 Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 4/62 (6%) Frame = +1 Query 79 QLLENVDAWYNDGWWIGQI----VKVFTGWRYTVYFRTTNEELEFEHGDLRPHQEWINGK 246 +L + VD + NDGWW+G+I + + Y+VYF ++ + + +R HQE + G Sbjct 82 KLNQKVDVFDNDGWWVGKIASEKILMEKSCYYSVYFDYCHQTIYYPCDQIRVHQELVWGD 141 Query 247 WV 252 W+ Sbjct 142 WI 143 >gi|51091512|dbj|BAD36250.1| agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein-like [Oryza sativa (japonica cultivar-group)] Length=956 Score = 43.1 bits (100), Expect = 5e-04 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 0/52 (0%) Frame = +1 Query 94 VDAWYNDGWWIGQIVKVFTGWRYTVYFRTTNEELEFEHGDLRPHQEWINGKW 249 +D W DGWW G ++KV R Y + + F LR EWI+ +W Sbjct 548 IDGWLYDGWWEGIVLKVNDARRLLAYLPGEKKMVLFRKDQLRHSLEWIDNEW 599 >gi|22327858|ref|NP_200371.2| UniGene infoGene info DNA binding / RNA binding [Arabidopsis thaliana] gi|18087548|gb|AAL58906.1|AF462815_1 UniGene infoGene info AT5g55600/MDF20_4 [Arabidopsis thaliana] gi|24111271|gb|AAN46759.1| UniGene infoGene info At5g55600/MDF20_4 [Arabidopsis thaliana] Length=663 Score = 42.7 bits (99), Expect = 7e-04 Identities = 30/84 (35%), Positives = 40/84 (47%), Gaps = 10/84 (11%) Frame = +1 Query 88 ENVDAWYNDGWWIGQIVKVFTGWRYT----VYFRTTNEELEFEHGDLRPHQEWINGKWVI 255 E VDAW+NDGWW G V + TG T +Y N L D+R ++W+ WV Sbjct 472 EAVDAWWNDGWWEG--VVIATGKPDTEDLKIYIPGENLCLTVLRKDIRISRDWVGDSWV- 528 Query 256 ASRDAS*VTEGLATILSQSLTVSE 327 D E LA + S S + S+ Sbjct 529 ---DIDPKPEILAIVSSDSSSESK 549 >gi|77551450|gb|ABA94247.1| Agenet domain containing protein [Oryza sativa (japonica cultivar-group)] Length=795 Score = 42.7 bits (99), Expect = 7e-04 Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 1/53 (1%) Frame = +1 Query 94 VDAWYNDGWWIGQIVKVFTGWRYTVYFRTTNEELEFEHGDLRPHQEWINGKWV 252 V+A++ DGWW G IV G TV F T E ++F +RP ++++ G+WV Sbjct 141 VEAFHKDGWWSG-IVLGGGGGVVTVAFPITREVIDFPPRLVRPRRDYVGGEWV 192 >gi|9758594|dbj|BAB09227.1| unnamed protein product [Arabidopsis thaliana] Length=581 Score = 42.7 bits (99), Expect = 7e-04 Identities = 30/84 (35%), Positives = 40/84 (47%), Gaps = 10/84 (11%) Frame = +1 Query 88 ENVDAWYNDGWWIGQIVKVFTGWRYT----VYFRTTNEELEFEHGDLRPHQEWINGKWVI 255 E VDAW+NDGWW G V + TG T +Y N L D+R ++W+ WV Sbjct 390 EAVDAWWNDGWWEG--VVIATGKPDTEDLKIYIPGENLCLTVLRKDIRISRDWVGDSWV- 446 Query 256 ASRDAS*VTEGLATILSQSLTVSE 327 D E LA + S S + S+ Sbjct 447 ---DIDPKPEILAIVSSDSSSESK 467 >gi|92894759|gb|ABE92374.1| Cyclin-like F-box; Agenet [Medicago truncatula] Length=501 Score = 42.4 bits (98), Expect = 9e-04 Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%) Frame = +1 Query 88 ENVDAWYNDGWWIGQIVKVFTGWRYTVYFRTTNEELEFEHGDLRPHQEWINGKWV 252 + V+A+ WW G++++ + V F T +EE+ F LR H++WIN WV Sbjct 77 DKVEAFRKQRWWEGRVIEDLGNGSFRVCF-TDSEEIVFPKDLLRVHRQWINHNWV 130 >gi|110737699|dbj|BAF00788.1| hypothetical protein [Arabidopsis thaliana] Length=663 Score = 41.6 bits (96), Expect = 0.001 Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 10/84 (11%) Frame = +1 Query 88 ENVDAWYNDGWWIGQIVKVFTGWRYT----VYFRTTNEELEFEHGDLRPHQEWINGKWVI 255 E VD W+NDGWW G V + TG T +Y N L D+R ++W+ WV Sbjct 472 EAVDTWWNDGWWEG--VVIATGKPDTEDLKIYIAGENLCLTVLRKDIRISRDWVGDSWV- 528 Query 256 ASRDAS*VTEGLATILSQSLTVSE 327 D E LA + S S + S+ Sbjct 529 ---DIDPKPEILAIVSSDSSSESK 549 >gi|92879072|gb|ABE85345.1| Cyclin-like F-box; Agenet [Medicago truncatula] Length=518 Score = 41.2 bits (95), Expect = 0.002 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Frame = +1 Query 88 ENVDAWYNDGWWIGQIVKVFTGWRYTVYFRTTNEELEFEHGDLRPHQEWINGKWV 252 + V+A+ WW G++ R+ V F T +EE+ F LR H++WIN WV Sbjct 71 DKVEAFRKHRWWEGRVSADLGNGRFLVCF-TDSEEMVFPKDLLRIHRQWINHNWV 124 >gi|15218770|ref|NP_171829.1| UniGene infoGene info RNA binding [Arabidopsis thaliana] gi|3850574|gb|AAC72114.1| Gene info Strong similarity to T08I13.7 gi|2275201 unknown protein from Arabidopsis thaliana BAC gb|AC002337. EST gb|Z17450 comes from this gene Length=670 Score = 40.0 bits (92), Expect = 0.004 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 0/56 (0%) Frame = +1 Query 82 LLENVDAWYNDGWWIGQIVKVFTGWRYTVYFRTTNEELEFEHGDLRPHQEWINGKW 249 L + V+ ++ W G + V +YTV T ++L +H DLRP + W +G W Sbjct 227 LRDCVEVFHGSSWRQGVVKGVHIEKQYTVTLEATKDKLVVKHSDLRPFKVWEDGVW 282 Score = 36.6 bits (83), Expect = 0.048 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 0/53 (0%) Frame = +1 Query 94 VDAWYNDGWWIGQIVKVFTGWRYTVYFRTTNEELEFEHGDLRPHQEWINGKWV 252 VDA Y W G ++ Y V F + ++FE LR H +W +WV Sbjct 86 VDADYKHRWRTGVVINKMENDSYLVLFDCPPDIIQFETKHLRAHLDWTGSEWV 138 >gi|22328747|ref|NP_193464.2| UniGene infoGene info ATG2484-1; RNA binding [Arabidopsis thaliana] gi|20466528|gb|AAM20581.1| UniGene infoGene info G2484-1 protein [Arabidopsis thaliana] gi|30725536|gb|AAP37790.1| UniGene infoGene info At4g17330 [Arabidopsis thaliana] Length=1058 Score = 37.0 bits (84), Expect = 0.037 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Frame = +1 Query 88 ENVDAWYNDGWWIGQIVKVFTGWR--YTVYFRTTNEELEFEHGDLRPHQEWINGKWVIAS 261 + VD+W +D W G I + TV+F E L + +LRP W +GKW+ S Sbjct 689 DRVDSWVHDSWLEGVITEKNKKDENTVTVHFPAEEETLTIKAWNLRPSLVWKDGKWIECS 748 >gi|87241252|gb|ABD33110.1| protein T31J12.4 [imported] - Arabidopsis thaliana [Medicago truncatula] Length=469 Score = 37.0 bits (84), Expect = 0.037 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Frame = +1 Query 88 ENVDAWYNDGWWIGQIVKVFTGWRYTVYFRTTNEELEFEHGDLRPHQEWINGKWV 252 + V+A+ WW G++ + + V F T + E+ F LR H++WIN WV Sbjct 77 DKVEAFRKHRWWEGRVSEDLGNGSFRVCF-TDSGEIVFPKDLLRVHRKWINHNWV 130 >gi|2664214|emb|CAA10906.1| UniGene info G2484-1 [Arabidopsis thaliana] Length=954 Score = 37.0 bits (84), Expect = 0.037 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Frame = +1 Query 88 ENVDAWYNDGWWIGQIVKVFTGWR--YTVYFRTTNEELEFEHGDLRPHQEWINGKWVIAS 261 + VD+W +D W G I + TV+F E L + +LRP W +GKW+ S Sbjct 585 DRVDSWVHDSWLEGVITEKNKKDENTVTVHFPAEEETLTIKAWNLRPSLVWKDGKWIECS 644 >gi|115479095|ref|NP_001063141.1| Gene info Os09g0408500 [Oryza sativa (japonica cultivar-group)] gi|113631374|dbj|BAF25055.1| Gene info Os09g0408500 [Oryza sativa (japonica cultivar-group)] Length=362 Score = 36.6 bits (83), Expect = 0.048 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 3/55 (5%) Frame = +1 Query 94 VDAWYNDGWWIG---QIVKVFTGWRYTVYFRTTNEELEFEHGDLRPHQEWINGKW 249 +D W DGWW G ++V + T + F + + F LR EWI+ KW Sbjct 178 IDGWLYDGWWEGILLKLVAMSTEFFPLSEFAGEKKMVLFHRDQLRHSLEWIDSKW 232 >gi|51091514|dbj|BAD36252.1| agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein-like [Oryza sativa (japonica cultivar-group)] Length=539 Score = 36.6 bits (83), Expect = 0.048 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 3/55 (5%) Frame = +1 Query 94 VDAWYNDGWWIG---QIVKVFTGWRYTVYFRTTNEELEFEHGDLRPHQEWINGKW 249 +D W DGWW G ++V + T + F + + F LR EWI+ KW Sbjct 279 IDGWLYDGWWEGILLKLVAMSTEFFPLSEFAGEKKMVLFHRDQLRHSLEWIDSKW 333 >gi|15237826|ref|NP_197767.1| UniGene infoGene info RNA binding [Arabidopsis thaliana] gi|10176845|dbj|BAB10051.1| Gene info unnamed protein product [Arabidopsis thaliana] Length=426 Score = 36.2 bits (82), Expect = 0.062 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 0/52 (0%) Frame = +1 Query 160 YTVYFRTTNEELEFEHGDLRPHQEWINGKWVIASRDAS*VTEGLATILSQSL 315 Y V T +++ F+ DLRP Q W +G W + S +T+G S S+ Sbjct 128 YIVLLEATKKQISFKQSDLRPLQVWEDGVWKMLQTRESSLTQGSGDETSDSV 179 >gi|15237825|ref|NP_197766.1| UniGene infoGene info RNA binding [Arabidopsis thaliana] gi|10176844|dbj|BAB10050.1| Gene info unnamed protein product [Arabidopsis thaliana] Length=438 Score = 35.4 bits (80), Expect = 0.11 Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 11/75 (14%) Frame = +1 Query 79 QLLENVDAWYND-GWWIGQIV--------KVFTGWRYTVYFRTTNEELEFEHGDLRPHQE 231 QL ENV+ + + GW G+++ + W Y V +T ++L F+ DLRP + Sbjct 91 QLEENVEVFLDGMGWRHGRVMGSQERAIGTLSQKW-YFVRLESTKKQLTFKQSDLRPLKV 149 Query 232 WINGKW-VIASRDAS 273 W +G W V+ +R+ S Sbjct 150 WEDGVWKVLQTRELS 164 >gi|110739535|dbj|BAF01676.1| hypothetical protein [Arabidopsis thaliana] Length=450 Score = 35.0 bits (79), Expect = 0.14 Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 0/31 (0%) Frame = +1 Query 157 RYTVYFRTTNEELEFEHGDLRPHQEWINGKW 249 RYTV T +E H DLRP W +G W Sbjct 8 RYTVRLEATQQESTIRHSDLRPFMVWEDGVW 38 >gi|115468804|ref|NP_001058001.1| Gene info Os06g0600700 [Oryza sativa (japonica cultivar-group)] gi|113596041|dbj|BAF19915.1| Gene info Os06g0600700 [Oryza sativa (japonica cultivar-group)] Length=300 Score = 34.3 bits (77), Expect = 0.24 Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 0/60 (0%) Frame = +1 Query 94 VDAWYNDGWWIGQIVKVFTGWRYTVYFRTTNEELEFEHGDLRPHQEWINGKWVIASRDAS 273 ++A+ + W I ++V+V Y V ++ EL +LR + W +GKW + +D++ Sbjct 76 LEAFDSYSWKIAEMVRVLGKDFYLVRLLGSSLELRTHASELRLRKHWKDGKWTVLQKDST 135 >gi|87241249|gb|ABD33107.1| Cyclin-like F-box; Agenet [Medicago truncatula] Length=514 Score = 34.3 bits (77), Expect = 0.24 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Frame = +1 Query 88 ENVDAWYNDGWWIGQIVKVFTGWRYTVYFRTTNEELEFEHGDLRPHQEWINGKWV 252 ++VD ++ GWW G I + ++ V T ++ F LR H+ WI WV Sbjct 74 DDVDVFWKQGWWKGHIKEDLGYGKFRVTVTGTPTKV-FSKEKLRIHRNWIIDNWV 127 >gi|50725037|dbj|BAD32839.1| agenet domain-containing protein-like [Oryza sativa (japonica cultivar-group)] gi|51090873|dbj|BAD35446.1| agenet domain-containing protein-like [Oryza sativa (japonica cultivar-group)] Length=402 Score = 34.3 bits (77), Expect = 0.24 Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 0/60 (0%) Frame = +1 Query 94 VDAWYNDGWWIGQIVKVFTGWRYTVYFRTTNEELEFEHGDLRPHQEWINGKWVIASRDAS 273 ++A+ + W I ++V+V Y V ++ EL +LR + W +GKW + +D++ Sbjct 76 LEAFDSYSWKIAEMVRVLGKDFYLVRLLGSSLELRTHASELRLRKHWKDGKWTVLQKDST 135 >gi|115483404|ref|NP_001065372.1| Gene info Os10g0559600 [Oryza sativa (japonica cultivar-group)] gi|113639904|dbj|BAF27209.1| Gene info Os10g0559600 [Oryza sativa (japonica cultivar-group)] Length=474 Score = 33.9 bits (76), Expect = 0.31 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%) Frame = +1 Query 88 ENVDAWYNDGWWIGQIVKVFTG--WRYTVYFRTTNEELEFEHGDLRPHQEWINGKWVIAS 261 ++VD D W G I + G + TV F T++ L + +LRP W +G+W+ S Sbjct 86 DHVDVLIEDSWREGIISRNRDGDETKLTVQFSGTSDSLVVDAWNLRPSLVWNDGQWIEWS 145 Query 262 R 264 R Sbjct 146 R 146 >gi|110289566|gb|ABG66256.1| Agenet domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] Length=2035 Score = 33.9 bits (76), Expect = 0.31 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%) Frame = +1 Query 88 ENVDAWYNDGWWIGQIVKVFTG--WRYTVYFRTTNEELEFEHGDLRPHQEWINGKWVIAS 261 ++VD D W G I + G + TV F T++ L + +LRP W +G+W+ S Sbjct 1647 DHVDVLIEDSWREGIISRNRDGDETKLTVQFSGTSDSLVVDAWNLRPSLVWNDGQWIEWS 1706 Query 262 R 264 R Sbjct 1707 R 1707 >gi|57899247|dbj|BAD87492.1| hypothetical protein [Oryza sativa (japonica cultivar-group)] gi|57900407|dbj|BAD87643.1| hypothetical protein [Oryza sativa (japonica cultivar-group)] Length=874 Score = 33.5 bits (75), Expect = 0.40 Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 7/66 (10%) Frame = +1 Query 82 LLENVDAWYNDGWWIGQIVKVF-------TGWRYTVYFRTTNEELEFEHGDLRPHQEWIN 240 + + V+A++ +GWW G + + YTV F + EE + +R + ++ Sbjct 254 VFDMVEAYHREGWWPGVVSAAWPARGRKAAAAMYTVSFPSCREEAKLPASLVRRRRAFVR 313 Query 241 GKWVIA 258 G+W+ A Sbjct 314 GRWMDA 319 >gi|78708589|gb|ABB47564.1| Agenet domain containing protein [Oryza sativa (japonica cultivar-group)] Length=965 Score = 33.5 bits (75), Expect = 0.40 Identities = 19/64 (29%), Positives = 25/64 (39%), Gaps = 21/64 (32%) Frame = +1 Query 94 VDAWYNDGWWIGQIVKV------------FTGWRYTVYFRTTNEELEFEHGDLRPHQEWI 237 +D W DGWW G ++K+ F G + V FR LR EWI Sbjct 594 IDGWLYDGWWEGIVLKLVAMSMEFFPLSEFAGEKKMVLFR---------RDQLRHSLEWI 644 Query 238 NGKW 249 +W Sbjct 645 GNEW 648 >gi|115444929|ref|NP_001046244.1| Gene info Os02g0204500 [Oryza sativa (japonica cultivar-group)] gi|113535775|dbj|BAF08158.1| Gene info Os02g0204500 [Oryza sativa (japonica cultivar-group)] Length=230 Score = 33.1 bits (74), Expect = 0.53 Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 0/52 (0%) Frame = +1 Query 118 WWIGQIVKVFTGWRYTVYFRTTNEELEFEHGDLRPHQEWINGKWVIASRDAS 273 W + ++V++ Y V ++ EL+ +LR Q W +GKWV +D++ Sbjct 85 WKVAEVVRLLGFSYYLVRLLGSSLELKVHASNLRIRQLWEDGKWVAIPKDSA 136 >gi|46390520|dbj|BAD16008.1| Gene info putative agenet domain-containing protein [Oryza sativa (japonica cultivar-group)] gi|51536260|dbj|BAD38428.1| Gene info putative agenet domain-containing protein [Oryza sativa (japonica cultivar-group)] Length=410 Score = 33.1 bits (74), Expect = 0.53 Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 0/52 (0%) Frame = +1 Query 118 WWIGQIVKVFTGWRYTVYFRTTNEELEFEHGDLRPHQEWINGKWVIASRDAS 273 W + ++V++ Y V ++ EL+ +LR Q W +GKWV +D++ Sbjct 85 WKVAEVVRLLGFSYYLVRLLGSSLELKVHASNLRIRQLWEDGKWVAIPKDSA 136 >gi|115473271|ref|NP_001060234.1| Gene info Os07g0607300 [Oryza sativa (japonica cultivar-group)] gi|113611770|dbj|BAF22148.1| Gene info Os07g0607300 [Oryza sativa (japonica cultivar-group)] Length=346 Score = 32.3 bits (72), Expect = 0.90 Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 2/55 (3%) Frame = +1 Query 94 VDAWYNDGWWIGQIVKV--FTGWRYTVYFRTTNEELEFEHGDLRPHQEWINGKWV 252 VD W GWW G +V + +YF N + +LR ++W+ WV Sbjct 186 VDVWQFSGWWEGVLVSADNISADSLQIYFPGENFFSVCQLKNLRISKDWVKSHWV 240 >gi|50508663|dbj|BAD31149.1| putative agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein [Oryza sativa (japonica cultivar-group)] gi|50509856|dbj|BAD32028.1| putative agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein [Oryza sativa (japonica cultivar-group)] Length=636 Score = 32.3 bits (72), Expect = 0.90 Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 2/55 (3%) Frame = +1 Query 94 VDAWYNDGWWIGQIVKV--FTGWRYTVYFRTTNEELEFEHGDLRPHQEWINGKWV 252 VD W GWW G +V + +YF N + +LR ++W+ WV Sbjct 476 VDVWQFSGWWEGVLVSADNISADSLQIYFPGENFFSVCQLKNLRISKDWVKSHWV 530
  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 16, 2007  5:53 PM
  Number of letters in database: 101,065,385
  Number of sequences in database:  283,397
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283397
Number of Hits to DB: 326
Number of extensions: 1
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 501
Length of database: 101065385
Length adjustment: 105
Effective length of query: 396
Effective length of database: 71308700
Effective search space: 4421139400
Effective search space used: 4421139400
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 63 (28.9 bits)