Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1169016453-18553-56044800434.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,460,989 sequences; 1,533,424,333 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig401 Length=454
Score E Sequences producing significant alignments: (Bits) Value gi|68299213|emb|CAJ13707.1| malate dehydrogenase [Capsicum chine 100 3e-21 gi|83283965|gb|ABC01890.1| malate dehydrogenase-like protein [So 97.4 2e-20 gi|27462762|gb|AAO15574.1|AF459645_1 malate dehydrogenase [Lupin 97.1 2e-20 gi|27462764|gb|AAO15575.1|AF459646_1 malate dehydrogenase [Lupin 97.1 2e-20 gi|77999077|gb|ABB16910.1| malate dehydrogenase [Lycopersicon ch 97.1 2e-20 gi|10798652|emb|CAC12826.1| malate dehydrogenase [Nicotiana taba 96.3 4e-20 gi|92879293|gb|ABE85461.1| Malate dehydrogenase, active site ... 95.5 7e-20 gi|15982948|gb|AAL11502.1|AF367442_1 NAD-dependent malate dehydr 95.5 7e-20 gi|52851186|emb|CAH58641.1| malate dehydrogenase [Plantago major 95.5 7e-20 gi|10334493|emb|CAC10208.1| cytosolic malate dehydrogenase [Cice 94.4 2e-19 gi|42521311|gb|AAS18241.1| cytosolic malate dehydrogenase [Glyci 92.4 6e-19 gi|11133373|sp|O48905|MDHC_MEDSA Malate dehydrogenase, cytopl... 92.4 6e-19 gi|11133601|sp|Q9SML8|MDHC_BETVU Malate dehydrogenase, cytopl... 90.1 3e-18 gi|13517921|gb|AAK29056.1|AF346003_1 malate dehydrogenase [Loliu 88.6 8e-18 gi|21593565|gb|AAM65532.1| cytosolic malate dehydrogenase [Arabi 88.2 1e-17 gi|14269473|gb|AAK58078.1| malate dehydrogenase [Zea mays] 88.2 1e-17 gi|115482534|ref|NP_001064860.1| Os10g0478200 [Oryza sativa (... 88.2 1e-17 gi|15239843|ref|NP_199147.1| malate dehydrogenase/ oxidoreduc... 88.2 1e-17 gi|18202485|sp|Q08062|MDHC_MAIZE Malate dehydrogenase, cytopl... 88.2 1e-17 gi|15219721|ref|NP_171936.1| malate dehydrogenase/ oxidoreduc... 87.8 1e-17 gi|52139818|gb|AAU29199.1| cytosolic malate dehydrogenase [Lycop 85.5 7e-17 gi|12229778|sp|O24047|MDHC_MESCR Malate dehydrogenase, cytopl... 85.5 7e-17 gi|39939491|gb|AAR32785.1| malate dehydrogenase [Pinus pinaster] 81.6 1e-15 gi|15241923|ref|NP_200483.1| malate dehydrogenase/ oxidoreduc... 78.6 9e-15 gi|24527967|emb|CAC79550.1| NAD-dependent malate dehydrogenase [ 74.3 2e-13 gi|116310134|emb|CAH67150.1| OSIGBa0122F23.7 [Oryza sativa (indi 66.6 3e-11 gi|116058088|emb|CAL53277.1| Malate dehydrogenase (ISS) [Ostreoc 66.6 3e-11 gi|115459790|ref|NP_001053495.1| Os04g0551200 [Oryza sativa (... 66.6 3e-11 gi|38605860|emb|CAE75902.1| OSJNBb0034G17.18 [Oryza sativa (japo 66.6 3e-11 gi|24527969|emb|CAC80841.1| cytosolic malate dehydrogenase [Chla 65.1 1e-10 gi|24528075|emb|CAC80840.1| cytosolic malate dehydrogenase [Mant 65.1 1e-10 gi|38324699|gb|AAR16531.1| NAD-dependent malate dehydrogenase [Q 52.8 5e-07 gi|121309841|dbj|BAF44222.1| malate dehydrogenase like-protein [ 50.4 2e-06 gi|18539425|gb|AAL74383.1|AF359115_1 putative malate dehydrogena 45.8 6e-05 gi|18539427|gb|AAL74384.1|AF359116_1 putative malate dehydrogena 45.8 6e-05 gi|116059121|emb|CAL54828.1| malate dehydrogenase, NADP+depen... 42.4 7e-04 gi|1708968|sp|P52426|MDHP_SPIOL Malate dehydrogenase [NADP], ... 33.5 0.32 gi|11136915|emb|CAC15546.1| plastidic NADP-dependent malate d... 32.7 0.54 gi|21954701|gb|AAM83089.1|AF522057_1 malate dehydrogenase [Dunal 32.7 0.54 gi|115453623|ref|NP_001050412.1| Os03g0427100 [Oryza sativa (... 32.3 0.70 gi|115451489|ref|NP_001049345.1| Os03g0211100 [Oryza sativa (... 31.6 1.2 gi|60396844|gb|AAX19661.1| cysteine proteinase [Populus tomentos 29.3 6.0 gi|15228658|ref|NP_189573.1| ubiquitin-protein ligase/ zinc i... 28.9 7.8 gi|11994767|dbj|BAB03123.1| RING zinc finger protein-like [Arabi 28.9 7.8
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 16, 2007 5:53 PM Number of letters in database: 101,065,385 Number of sequences in database: 283,397 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283397 Number of Hits to DB: 330 Number of extensions: 3 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 454 Length of database: 101065385 Length adjustment: 103 Effective length of query: 351 Effective length of database: 71875494 Effective search space: 3450023712 Effective search space used: 3450023712 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 62 (28.5 bits)