Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1169017432-1154-69218479524.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,460,989 sequences; 1,533,424,333 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig412 Length=532
Score E Sequences producing significant alignments: (Bits) Value gi|92896039|gb|ABE93045.1| emp24/gp25L/p24 [Medicago truncatula] 247 2e-65 gi|51969482|dbj|BAD43433.1| unknown protein [Arabidopsis thal... 245 8e-65 gi|51969410|dbj|BAD43397.1| unnamed protein product [Arabidop... 245 8e-65 gi|26451774|dbj|BAC42982.1| unknown protein [Arabidopsis thal... 245 8e-65 gi|51970206|dbj|BAD43795.1| unknown protein [Arabidopsis thalian 244 2e-64 gi|51970470|dbj|BAD43927.1| unnamed protein product [Arabidopsis 243 3e-64 gi|115463105|ref|NP_001055152.1| Os05g0306000 [Oryza sativa (... 221 9e-58 gi|42567551|ref|NP_195721.2| unknown protein [Arabidopsis thalia 197 2e-50 gi|38344623|emb|CAE02522.2| OSJNBb0003A12.9 [Oryza sativa (japon 33.5 0.46 gi|116056360|emb|CAL56743.1| Cell cycle control protein (croo... 31.6 1.8 gi|84514193|gb|ABC59105.1| cytochrome P450 monooxygenase CYP76X2 31.6 1.8 gi|9581890|gb|AAF89109.1|AC074299_3 TEL1S.2 [Arabidopsis thalian 30.8 3.0 gi|42567506|ref|NP_195548.2| hedgehog receptor [Arabidopsis thal 30.4 3.9 gi|84453216|dbj|BAE71205.1| putative cytochrome P450 [Trifolium 29.6 6.7 gi|30678181|ref|NP_178601.2| acetylglucosaminyltransferase/ a... 29.3 8.7
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 16, 2007 5:53 PM Number of letters in database: 101,065,385 Number of sequences in database: 283,397 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283397 Number of Hits to DB: 387 Number of extensions: 12 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 532 Length of database: 101065385 Length adjustment: 106 Effective length of query: 426 Effective length of database: 71025303 Effective search space: 5042796513 Effective search space used: 5042796513 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 64 (29.3 bits)