Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1169018358-22253-74414363389.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,460,989 sequences; 1,533,424,333 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig425 Length=524
Score E Sequences producing significant alignments: (Bits) Value gi|90762220|gb|ABD97880.1| suppressor of K+ transport growth ... 323 2e-88 gi|37894600|gb|AAF21428.2|AF165422_1 salt-induced AAA-Type ATPas 318 7e-87 gi|115434450|ref|NP_001041983.1| Os01g0141100 [Oryza sativa (... 317 1e-86 gi|54290315|dbj|BAD61315.1| putative p60 katanin [Oryza sativa ( 317 1e-86 gi|22652796|gb|AAN03820.1|AF499028_1 AAA-ATPase-like protein ... 310 2e-84 gi|92896432|gb|ABE93205.1| AAA ATPase, central region; MIT [Medi 309 3e-84 gi|16265863|gb|AAL16668.1|AF419850_1 suppressor of K+ transpo... 306 2e-83 gi|15226199|ref|NP_180328.1| ATP binding / nucleoside-triphos... 301 9e-82 gi|21593336|gb|AAM65285.1| putative ATPase [Arabidopsis thaliana 298 1e-80 gi|115444371|ref|NP_001045965.1| Os02g0159900 [Oryza sativa (... 296 4e-80 gi|54290174|dbj|BAD61062.1| putative p60 katanin [Oryza sativa ( 251 8e-67 gi|116059961|emb|CAL56020.1| AAA+-type ATPase (ISS) [Ostreococcu 210 2e-54 gi|115440027|ref|NP_001044293.1| Os01g0757400 [Oryza sativa (... 117 2e-26 gi|92889962|gb|ABE90089.1| AAA ATPase [Medicago truncatula] 115 7e-26 gi|115439107|ref|NP_001043833.1| Os01g0673500 [Oryza sativa (... 114 3e-25 gi|56202307|dbj|BAD73766.1| katanin-like [Oryza sativa (japon... 114 3e-25 gi|56201862|dbj|BAD73312.1| vacuolar protein sorting factor 4... 114 3e-25 gi|115439215|ref|NP_001043887.1| Os01g0683100 [Oryza sativa (... 114 3e-25 gi|32478841|gb|AAP83637.1| katanin [Gossypium hirsutum] 113 3e-25 gi|34421682|gb|AAP43505.2| katanin-like protein [Gossypium hirsu 113 4e-25 gi|19909896|dbj|BAB87822.1| katanin [Arabidopsis thaliana] 113 4e-25 gi|15220118|ref|NP_178151.1| ERH3 (ECTOPIC ROOT HAIR 3); ATP ... 113 4e-25 gi|110739496|dbj|BAF01657.1| hypothetical protein [Arabidopsis t 111 1e-24 gi|79576982|ref|NP_182074.3| ATP binding / nucleoside-triphos... 111 1e-24 gi|95116508|gb|ABF56167.1| end 13 protein [Theobroma cacao] 110 4e-24 gi|18403587|ref|NP_565791.1| ATP binding / ATPase/ nucleoside... 110 4e-24 gi|42571053|ref|NP_973600.1| ATP binding / ATPase/ nucleoside... 110 4e-24 gi|32478843|gb|AAP83638.1| katanin [Gossypium barbadense] 108 1e-23 gi|16518974|gb|AAL25088.1|AF426837_1 Tobacco mosaic virus hel... 105 1e-22 gi|6466293|gb|AAF12877.1|AF205377_1 p60 katanin [Chlamydomonas r 105 1e-22 gi|60547775|gb|AAX23851.1| hypothetical protein At3g27130 [Arabi 103 4e-22 gi|42565235|ref|NP_189348.2| ATP binding / ATPase/ nucleoside... 103 4e-22 gi|9279636|dbj|BAB01094.1| unnamed protein product [Arabidopsis 103 4e-22 gi|115466174|ref|NP_001056686.1| Os06g0130000 [Oryza sativa (... 103 5e-22 gi|8569089|gb|AAF76434.1|AC015445_1 Contains similarity to p6... 102 8e-22 gi|15222886|ref|NP_175433.1| ATP binding / ATPase/ nucleoside... 102 8e-22 gi|79406871|ref|NP_188608.2| ATP binding / ATPase/ nucleoside... 99.8 5e-21 gi|9294440|dbj|BAB02560.1| unnamed protein product [Arabidopsis 99.8 5e-21 gi|115435412|ref|NP_001042464.1| Os01g0226400 [Oryza sativa (... 97.1 3e-20 gi|115438673|ref|NP_001043616.1| Os01g0623500 [Oryza sativa (... 96.3 6e-20 gi|2979543|gb|AAC06152.1| hypothetical protein [Arabidopsis thal 95.5 1e-19 gi|15234347|ref|NP_194529.1| ATP binding / ATPase/ nucleoside... 94.7 2e-19 gi|28188571|gb|AAN46211.1| unknown protein [Arabidopsis thaliana 94.7 2e-19 gi|28188573|gb|AAN46212.1| unknown protein [Arabidopsis thali... 94.7 2e-19 gi|28188591|gb|AAN46221.1| unknown protein [Arabidopsis lyrat... 94.0 3e-19 gi|115465705|ref|NP_001056452.1| Os05g0584600 [Oryza sativa (... 91.7 1e-18 gi|115467202|ref|NP_001057200.1| Os06g0225900 [Oryza sativa (... 91.3 2e-18 gi|92870453|gb|ABE79750.1| AAA ATPase, central region; DEAD/D... 91.3 2e-18 gi|51535008|dbj|BAD37292.1| spastin-like [Oryza sativa (japonica 91.3 2e-18 gi|46390947|dbj|BAD16461.1| transitional endoplasmic reticulu... 91.3 2e-18 gi|110741581|dbj|BAE98739.1| hypothetical protein [Arabidopsis t 90.9 2e-18 gi|92883879|gb|ABE87117.1| AAA ATPase, central region [Medicago 88.6 1e-17 gi|92874885|gb|ABE83074.1| AAA ATPase, central region; DEAD/D... 87.0 3e-17 gi|17065032|gb|AAL32670.1| similar to homeobox protein [Arabidop 87.0 3e-17 gi|18407974|ref|NP_564824.1| ATP binding / ATPase/ nucleoside... 87.0 3e-17 gi|6692099|gb|AAF24564.1|AC007764_6 F22C12.12 [Arabidopsis thali 87.0 3e-17 gi|30696968|ref|NP_849842.1| ATP binding / ATPase/ nucleoside... 87.0 3e-17 gi|115486533|ref|NP_001068410.1| Os11g0661400 [Oryza sativa (... 86.3 6e-17 gi|108864633|gb|ABA95244.2| AAA-type ATPase family protein, p... 86.3 6e-17 gi|92878428|gb|ABE85040.1| Peptidase S1 and S6, chymotrypsin/... 85.5 1e-16 gi|110742410|dbj|BAE99126.1| hypothetical protein [Arabidopsis t 84.7 2e-16 gi|110741185|dbj|BAF02143.1| hypothetical protein [Arabidopsis t 84.7 2e-16 gi|20259341|gb|AAM13995.1| unknown protein [Arabidopsis thaliana 84.7 2e-16 gi|30679158|ref|NP_567238.2| ATP binding / ATPase/ nucleoside... 84.7 2e-16 gi|3193292|gb|AAC19276.1| T14P8.7 [Arabidopsis thaliana] >gi|... 84.7 2e-16 gi|4678264|emb|CAB41125.1| putative protein [Arabidopsis thal... 84.3 2e-16 gi|42567117|ref|NP_194217.2| ATP binding / nucleoside-triphos... 84.3 2e-16 gi|92868991|gb|ABE78936.1| AAA ATPase; DEAD/DEAH box helicase... 84.0 3e-16 gi|6056413|gb|AAF02877.1|AC009525_11 Unknown protein [Arabidopsi 82.8 6e-16 gi|30678418|ref|NP_171788.2| ATP binding / ATPase/ nucleoside... 82.8 6e-16 gi|115474007|ref|NP_001060602.1| Os07g0672500 [Oryza sativa (... 82.4 8e-16 gi|115452967|ref|NP_001050084.1| Os03g0344700 [Oryza sativa (... 82.0 1e-15 gi|108708096|gb|ABF95891.1| AAA-type ATPase family protein, p... 82.0 1e-15 gi|92878426|gb|ABE85038.1| Peptidase S1 and S6, chymotrypsin/... 81.6 1e-15 gi|116000599|emb|CAL50279.1| Nuclear AAA ATPase (VCP subfamily) 78.2 2e-14 gi|56201863|dbj|BAD73313.1| katanin p60 subunit A 1-like [Ory... 78.2 2e-14 gi|15234242|ref|NP_194498.1| ATP binding / ATPase/ nucleoside... 77.4 3e-14 gi|116000296|emb|CAL49976.1| Nuclear AAA ATPase (VCP subfamily) 76.3 6e-14 gi|1705678|sp|P54774|CDC48_SOYBN Cell division cycle protein ... 76.3 6e-14 gi|2492504|sp|Q96372|CDC48_CAPAN Cell division cycle protein ... 76.3 6e-14 gi|98962497|gb|ABF59516.1| putative spindle disassembly relat... 75.9 8e-14 gi|38455496|gb|AAR20845.1| cell division cycle protein 48 ['Chlo 75.9 8e-14 gi|15238774|ref|NP_200166.1| ATP binding / ATP-dependent pept... 75.5 1e-13 gi|110289141|gb|AAP53974.2| Cell division cycle protein 48, p... 75.1 1e-13 gi|115450773|ref|NP_001048987.1| Os03g0151800 [Oryza sativa (... 74.7 2e-13 gi|15232776|ref|NP_187595.1| CDC48 (CELL DIVISION CYCLE 48); ... 74.7 2e-13 gi|15231775|ref|NP_190891.1| ATP binding / hydrolase/ nucleos... 74.7 2e-13 gi|11265361|pir||T48355 transitional endoplasmic reticulum AT... 74.3 2e-13 gi|18414193|ref|NP_568114.1| ATP binding / ATPase/ hydrolase/... 74.3 2e-13 gi|51535393|dbj|BAD37263.1| putative chloroplast protease [Or... 73.2 5e-13 gi|115476404|ref|NP_001061798.1| Os08g0413000 [Oryza sativa (... 72.4 9e-13 gi|66954652|dbj|BAD99306.1| FtsH protease [Solanum lycopersicum] 72.0 1e-12 gi|6760428|gb|AAF28347.1| calmodulin-binding protein [Arabido... 72.0 1e-12 gi|15228991|ref|NP_191228.1| CIP111 (CAM INTERACTING PROTEIN ... 72.0 1e-12 gi|15232908|ref|NP_186894.1| ATP binding / ATPase/ nucleoside... 71.6 1e-12 gi|21592745|gb|AAM64694.1| cell division protein FtsH-like prote 71.6 1e-12 gi|18422193|ref|NP_568604.1| VAR1 (VARIEGATED 1); ATP-depende... 71.6 1e-12 gi|116054840|emb|CAL56917.1| 26S proteasome regulatory comple... 71.2 2e-12 gi|116060233|emb|CAL56292.1| AAA+-type ATPase (ISS) [Ostreococcu 70.9 3e-12 gi|10086490|gb|AAG12550.1|AC007797_10 Similar to cell division c 70.9 3e-12
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 16, 2007 5:53 PM Number of letters in database: 101,065,385 Number of sequences in database: 283,397 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283397 Number of Hits to DB: 398 Number of extensions: 3 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 524 Length of database: 101065385 Length adjustment: 105 Effective length of query: 419 Effective length of database: 71308700 Effective search space: 4920300300 Effective search space used: 4920300300 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 63 (28.9 bits)