Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168929080-15586-57996771874.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig100 Length=579
Related Structures Score E Sequences producing significant alignments: (Bits) Value gi|5804835|emb|CAA04772.2| cystathionine gamma synthase [Frag... 327 2e-89 gi|5822270|pdb|1QGN|A Chain A, Cystathionine Gamma-Synthase F... 326 4e-89 gi|8439543|gb|AAF74982.1|AF082892_1 cystathionine gamma-synthase 323 2e-88 gi|40806079|gb|AAR92031.1| cystathionine gamma synthase [Lycoper 320 2e-87 gi|8439541|gb|AAF74981.1|AF082891_1 cystathionine gamma-synthase 319 5e-87 gi|3293261|gb|AAC25687.1| cystathionine gamma-synthase precursor 318 1e-86 gi|20259526|gb|AAM13883.1| putative cystathionine gamma-synthase 318 1e-86 gi|1373125|gb|AAC49574.1| similar to the metB gene product of... 318 1e-86 gi|15232042|ref|NP_186761.1| MTO1 (METHIONINE OVERACCUMULATIO... 318 1e-86 gi|1742961|emb|CAA64383.1| cystathionine gamma-synthase [Arabido 316 3e-86 gi|3202028|gb|AAC19395.1| cystathionine gamma-synthase [Mesembry 312 6e-85 gi|92883029|gb|ABE86772.1| Cys/Met metabolism pyridoxal-phosp... 298 7e-81 gi|4959932|gb|AAD34548.1|AF141602_1 cystathionine-gamma-synthase 297 2e-80 gi|5834422|gb|AAD31520.2|AF144102_1 cystathionine-gamma-synthase 294 2e-79 gi|113204691|gb|ABI34092.1| cystathionine gamma-synthase [Medica 293 2e-79 gi|92870065|gb|ABE79443.1| Cys/Met metabolism pyridoxal-phosp... 292 5e-79 gi|18921317|gb|AAL82522.1|AC084766_8 putative cystathionine gamm 276 4e-74 gi|2198853|gb|AAB61348.1| cystathionine gamma-synthase [Zea mays 276 4e-74 gi|2198851|gb|AAB61347.1| cystathionine gamma-synthase [Zea mays 274 1e-73 gi|108708426|gb|ABF96221.1| Cys/Met metabolism PLP-dependent ... 260 2e-69 gi|15217498|ref|NP_174600.1| cystathionine gamma-synthase [Ar... 231 2e-60 gi|115453239|ref|NP_001050220.1| Os03g0376100 [Oryza sativa (... 228 1e-59 gi|12322374|gb|AAG51206.1|AC051630_3 cystathionine gamma-synt... 223 5e-58 gi|11602834|gb|AAG38873.1|AF076495_1 cystathionine gamma-synthas 222 6e-58 gi|115481894|ref|NP_001064540.1| Os10g0399700 [Oryza sativa (... 192 5e-49 gi|115481892|ref|NP_001064539.1| Os10g0399200 [Oryza sativa (... 192 9e-49 gi|78708558|gb|ABB47533.1| Cys/Met metabolism PLP-dependent e... 191 1e-48 gi|71534904|gb|AAZ32856.1| cystathionine-gamma-synthase [Medicag 188 1e-47 gi|50727378|gb|AAT81295.1| cystathionine gamma synthase [Medicag 175 1e-43 gi|13940602|gb|AAK50404.1|AC021891_5 Putative O-succinylhomos... 174 3e-43 gi|51535796|dbj|BAD37853.1| putative O-succinylhomoserine (th... 171 2e-42 gi|108708428|gb|ABF96223.1| Cys/Met metabolism PLP-dependent ... 170 3e-42 gi|108708427|gb|ABF96222.1| Cys/Met metabolism PLP-dependent ... 170 3e-42 gi|2146729|pir||S71228 O-succinylhomoserine (thiol)-lyase (EC... 168 1e-41 gi|116059552|emb|CAL55259.1| Cystathionine beta-lyases/cystat... 143 5e-34 gi|116059713|emb|CAL55420.1| Cystathionine beta-lyases/cystat... 97.8 2e-20 gi|55792550|gb|AAV65371.1| plastid cystathionine gamma-synthase 89.4 9e-18 gi|115482952|ref|NP_001065069.1| Os10g0517500 [Oryza sativa (... 83.2 6e-16 gi|8439539|gb|AAF74980.1|AF082890_1 cystathionine beta-lyase [So 77.4 3e-14 gi|15217709|ref|NP_176647.1| catalytic [Arabidopsis thaliana]... 75.5 1e-13 gi|30694567|ref|NP_850713.1| CBL (CYSTATHIONINE BETA-LYASE) [Ara 71.2 2e-12 gi|30694565|ref|NP_850712.1| CBL (CYSTATHIONINE BETA-LYASE) [... 71.2 2e-12 gi|15230203|ref|NP_191264.1| CBL (CYSTATHIONINE BETA-LYASE) [... 71.2 2e-12 gi|116055103|emb|CAL57499.1| Cystathionine beta-lyases/cystat... 69.7 7e-12 gi|48093935|gb|AAT40303.1| chloroplast cystathionine beta lyase 68.9 1e-11 gi|8096327|dbj|BAA95830.1| putative cystathionine beta-lyase ... 68.9 1e-11 gi|115466704|ref|NP_001056951.1| Os06g0175800 [Oryza sativa (... 68.9 1e-11 gi|23495284|dbj|BAC20137.1| rrj1 [Oryza sativa] 60.8 3e-09 gi|14588694|dbj|BAB61859.1| amino acid transporter-like [Oryz... 33.1 0.73 gi|116060156|emb|CAL56215.1| Cystathionine beta-lyases/cystat... 32.0 1.6 gi|115438829|ref|NP_001043694.1| Os01g0643800 [Oryza sativa (... 31.2 2.8 gi|15451577|gb|AAK98701.1|AC069158_13 Putative ABC transporter [ 30.8 3.6 gi|28208268|dbj|BAC56854.1| squalene synthase [Lotus japonicus] 30.0 6.2 gi|116310153|emb|CAH67167.1| H0211B05.4 [Oryza sativa (indica cu 29.6 8.0 gi|92887267|gb|ABE88785.1| Squalene/phytoene synthase [Medicago 29.6 8.0 gi|27475614|emb|CAD23250.1| farnesyl-diphosphate farnesyltransfe 29.6 8.0 gi|1552717|gb|AAB08578.1| squalene synthase [Nicotiana tabacum] 29.6 8.0 gi|1389893|gb|AAB02945.1| squalene synthase [Nicotiana tabacum] 29.6 8.0
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 343 Number of extensions: 7 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 579 Length of database: 101054579 Length adjustment: 107 Effective length of query: 472 Effective length of database: 70736236 Effective search space: 6083316296 Effective search space used: 6083316296 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 64 (29.3 bits)