Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168929685-15558-181202657407.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig118 Length=525
Score E Sequences producing significant alignments: (Bits) Value gi|61097812|dbj|BAD04852.2| hypothetical protein [Nicotiana bent 84.0 3e-16 gi|39652276|dbj|BAD04851.1| hypothetical protein [Solanum tubero 84.0 3e-16 gi|21618251|gb|AAM67301.1| unknown [Arabidopsis thaliana] 68.2 2e-11 gi|42572469|ref|NP_974330.1| unknown protein [Arabidopsis thalia 68.2 2e-11 gi|18401669|ref|NP_566590.1| unknown protein [Arabidopsis tha... 68.2 2e-11 gi|62321662|dbj|BAD95285.1| hypothetical protein [Arabidopsis th 65.9 8e-11 gi|77403665|dbj|BAE46411.1| hypothetical protein [Solanum tubero 63.5 4e-10 gi|92877257|gb|ABE84420.1| Ribonuclease H [Medicago truncatula] 34.3 0.26 gi|92872886|gb|ABE81418.1| non-LTR retrolelement reverse tran... 30.8 2.9
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 307 Number of extensions: 4 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 525 Length of database: 101054579 Length adjustment: 106 Effective length of query: 419 Effective length of database: 71019585 Effective search space: 4900351365 Effective search space used: 4900351365 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 63 (28.9 bits)