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BLASTX 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman 
(1997), "Gapped BLAST and PSI-BLAST: a new generation of 
protein database search programs", Nucleic Acids Res. 25:3389-3402.

RID: 1168929685-15558-181202657407.BLASTQ1


Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
           4,458,890 sequences; 1,532,996,420 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Query=  Contig118
Length=525


Distribution of 9 Blast Hits on the Query Sequence



                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|61097812|dbj|BAD04852.2|  hypothetical protein [Nicotiana bent  84.0    3e-16
gi|39652276|dbj|BAD04851.1|  hypothetical protein [Solanum tubero  84.0    3e-16 UniGene info
gi|21618251|gb|AAM67301.1|  unknown [Arabidopsis thaliana]         68.2    2e-11 UniGene info
gi|42572469|ref|NP_974330.1|  unknown protein [Arabidopsis thalia  68.2    2e-11 UniGene infoGene info
gi|18401669|ref|NP_566590.1|  unknown protein [Arabidopsis tha...  68.2    2e-11 UniGene infoGene info
gi|62321662|dbj|BAD95285.1|  hypothetical protein [Arabidopsis th  65.9    8e-11 UniGene info
gi|77403665|dbj|BAE46411.1|  hypothetical protein [Solanum tubero  63.5    4e-10 UniGene info
gi|92877257|gb|ABE84420.1|  Ribonuclease H [Medicago truncatula]   34.3    0.26 
gi|92872886|gb|ABE81418.1|  non-LTR retrolelement reverse tran...  30.8    2.9  
Alignments
>gi|61097812|dbj|BAD04852.2| hypothetical protein [Nicotiana benthamiana] Length=380 Score = 84.0 bits (206), Expect = 3e-16 Identities = 62/177 (35%), Positives = 88/177 (49%), Gaps = 23/177 (12%) Frame = -1 Query 501 SGIQWPFSNKVSAVPRLMNFNFPQGDKIKKIGSDALVSPGFMPISTADAAEV-------- 346 S +QW FSN +S PR ++F Q D+ K G D+L S G + ISTA+A + Sbjct 29 SAMQWSFSNNISTHPRYLSFKGAQEDR-PKTGFDSLTSTGLVTISTAEAVDSSHRSYSGV 87 Query 345 -QKSFNHNRQGGSHFSLTACSVQH-DLHPVQCPYDVKMFPvsnqavsvsvsNPFMKNHFA 172 QK+ +QGG+H+ T S H D H + + V++ PVS NP + Sbjct 88 GQKNMMLEKQGGTHYMSTTFSPHHYDAHAMHPSHGVRVLPVS---------NPANQ---I 135 Query 171 TAGLNLPVTSMKPQLLGGIPVTTPHSILPTLGSVVGSIEPWKSVKASGSPAQLTIFY 1 + + +P LG PVT+P S +PT VVG+ + + K PAQLTIFY Sbjct 136 SVSMTMPGHKSFVSPLGQNPVTSPISAVPTNSCVVGTTDLRGAPKTPSGPAQLTIFY 192 >gi|39652276|dbj|BAD04851.1| UniGene info hypothetical protein [Solanum tuberosum] Length=390 Score = 84.0 bits (206), Expect = 3e-16 Identities = 63/179 (35%), Positives = 96/179 (53%), Gaps = 14/179 (7%) Frame = -1 Query 501 SGIQWPFSNKVSAVPRLMNFNFPQGDKIKKIGSDALVSPGFMPISTADAAE--------- 349 S +QW FSN V+A P+ ++F DK KIG D+L S G + I+T +A + Sbjct 27 SAMQWSFSNNVTAHPQYLSFKSAPEDK-PKIGFDSLASTGLVTITTTEAVDSSHRTYSDV 85 Query 348 VQKSFNHNRQGGSHFSLTACSVQH-DLHPVQCPYDVKMFPvsnqavsvsvsN--PFMKNH 178 QK+ RQGG+H++ T S H D H V + V++ P+++ +SVS P K+ Sbjct 86 TQKNMMLERQGGTHYTTTTFSPHHYDAHSVHRSHGVRVLPLASPTNQISVSMTMPGHKSF 145 Query 177 FATAGLNLPVTSMKPQLLGGIPVTTPHSILPTLGSVVGSIEPWKSVKASGSPAQLTIFY 1 + G NL +T++ G V +P S +P+ +VVG+ + + K PAQLTIFY Sbjct 146 ISPVGQNL-ITTVNQLPGAGALVASPISAIPSSSTVVGTTDLRGAPKTPPGPAQLTIFY 203 >gi|21618251|gb|AAM67301.1| UniGene info unknown [Arabidopsis thaliana] Length=352 Score = 68.2 bits (165), Expect = 2e-11 Identities = 59/173 (34%), Positives = 82/173 (47%), Gaps = 29/173 (16%) Frame = -1 Query 498 GIQWPFSNKVSAVP-RLMNFNFPQGDKIKKIGSDALVSPG-FMPISTADAAEVQKSFNHN 325 G+ W FSNKVSA + ++F Q D+ +K G+ L G FMP S AD + + ++ Sbjct 33 GMNWSFSNKVSASSSQFLSFRPTQEDRHRKSGNYHLPHSGSFMPSSVADVYDSTRKAPYS 92 Query 324 RQGGSHFSLTACSVQHDLHPVQCPYDVKMFPvsnqavsvsvsNP----FMKNHFATAGLN 157 G V+MFP SNQ + + F +H+A G + Sbjct 93 SVQG----------------------VRMFPNSNQHEETNAVSMSMPGFQSHHYAPGGRS 130 Query 156 LPVTSMKPQLLGGIPVTTPH-SILPTLGSVVGSIEPWKSVKASGSPAQLTIFY 1 + Q L G+P+ P SILP GS+VG+ + S K GSPAQLTIFY Sbjct 131 FMNNNNNSQPLVGVPIMAPPISILPPPGSIVGTTDIRSSSKPIGSPAQLTIFY 183 >gi|42572469|ref|NP_974330.1| UniGene infoGene info unknown protein [Arabidopsis thaliana] Length=339 Score = 68.2 bits (165), Expect = 2e-11 Identities = 59/173 (34%), Positives = 82/173 (47%), Gaps = 29/173 (16%) Frame = -1 Query 498 GIQWPFSNKVSAVP-RLMNFNFPQGDKIKKIGSDALVSPG-FMPISTADAAEVQKSFNHN 325 G+ W FSNKVSA + ++F Q D+ +K G+ L G FMP S AD + + ++ Sbjct 20 GMNWSFSNKVSASSSQFLSFRPTQEDRHRKSGNYHLPHSGSFMPSSVADVYDSTRKAPYS 79 Query 324 RQGGSHFSLTACSVQHDLHPVQCPYDVKMFPvsnqavsvsvsNP----FMKNHFATAGLN 157 G V+MFP SNQ + + F +H+A G + Sbjct 80 SVQG----------------------VRMFPNSNQHEETNAVSMSMPGFQSHHYAPGGRS 117 Query 156 LPVTSMKPQLLGGIPVTTPH-SILPTLGSVVGSIEPWKSVKASGSPAQLTIFY 1 + Q L G+P+ P SILP GS+VG+ + S K GSPAQLTIFY Sbjct 118 FMNNNNNSQPLVGVPIMAPPISILPPPGSIVGTTDIRSSSKPIGSPAQLTIFY 170 >gi|18401669|ref|NP_566590.1| UniGene infoGene info unknown protein [Arabidopsis thaliana] gi|13926315|gb|AAK49623.1|AF372907_1 UniGene infoGene info AT3g17860/MEB5_8 [Arabidopsis thaliana] gi|9294490|dbj|BAB02709.1| Gene info unnamed protein product [Arabidopsis thaliana] gi|27764976|gb|AAO23609.1| UniGene infoGene info At3g17860/MEB5_8 [Arabidopsis thaliana] Length=352 Score = 68.2 bits (165), Expect = 2e-11 Identities = 59/173 (34%), Positives = 82/173 (47%), Gaps = 29/173 (16%) Frame = -1 Query 498 GIQWPFSNKVSAVP-RLMNFNFPQGDKIKKIGSDALVSPG-FMPISTADAAEVQKSFNHN 325 G+ W FSNKVSA + ++F Q D+ +K G+ L G FMP S AD + + ++ Sbjct 33 GMNWSFSNKVSASSSQFLSFRPTQEDRHRKSGNYHLPHSGSFMPSSVADVYDSTRKAPYS 92 Query 324 RQGGSHFSLTACSVQHDLHPVQCPYDVKMFPvsnqavsvsvsNP----FMKNHFATAGLN 157 G V+MFP SNQ + + F +H+A G + Sbjct 93 SVQG----------------------VRMFPNSNQHEETNAVSMSMPGFQSHHYAPGGRS 130 Query 156 LPVTSMKPQLLGGIPVTTPH-SILPTLGSVVGSIEPWKSVKASGSPAQLTIFY 1 + Q L G+P+ P SILP GS+VG+ + S K GSPAQLTIFY Sbjct 131 FMNNNNNSQPLVGVPIMAPPISILPPPGSIVGTTDIRSSSKPIGSPAQLTIFY 183 >gi|62321662|dbj|BAD95285.1| UniGene info hypothetical protein [Arabidopsis thaliana] Length=319 Score = 65.9 bits (159), Expect = 8e-11 Identities = 58/172 (33%), Positives = 81/172 (47%), Gaps = 29/172 (16%) Frame = -1 Query 495 IQWPFSNKVSAVP-RLMNFNFPQGDKIKKIGSDALVSPG-FMPISTADAAEVQKSFNHNR 322 + W FSNKVSA + ++F Q D+ +K G+ L G FMP S AD + + ++ Sbjct 1 MNWSFSNKVSASSSQFLSFRPTQEDRHRKSGNYHLPHSGSFMPSSVADVYDSTRKAPYSS 60 Query 321 QGGSHFSLTACSVQHDLHPVQCPYDVKMFPvsnqavsvsvsNP----FMKNHFATAGLNL 154 G V+MFP SNQ + + F +H+A G + Sbjct 61 VQG----------------------VRMFPNSNQHEETNAVSMSMPGFQSHHYAPGGRSF 98 Query 153 PVTSMKPQLLGGIPVTTPH-SILPTLGSVVGSIEPWKSVKASGSPAQLTIFY 1 + Q L G+P+ P SILP GS+VG+ + S K GSPAQLTIFY Sbjct 99 MNNNNNSQPLVGVPIMAPPISILPPPGSIVGTTDIRSSSKPIGSPAQLTIFY 150 >gi|77403665|dbj|BAE46411.1| UniGene info hypothetical protein [Solanum tuberosum] Length=301 Score = 63.5 bits (153), Expect = 4e-10 Identities = 29/44 (65%), Positives = 36/44 (81%), Gaps = 0/44 (0%) Frame = -1 Query 132 QLLGGIPVTTPHSILPTLGSVVGSIEPWKSVKASGSPAQLTIFY 1 Q+LGGIPVT P S+LP+ GSV G+ EPW + K+S +PAQLTIFY Sbjct 79 QVLGGIPVTAPLSMLPSRGSVAGTTEPWFNSKSSAAPAQLTIFY 122 >gi|92877257|gb|ABE84420.1| Ribonuclease H [Medicago truncatula] Length=468 Score = 34.3 bits (77), Expect = 0.26 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%) Frame = -3 Query 187 EESFCNCWSKFACYFHEATITWRNSSDNSTFNSSHPWFCCWKY*TVEKCQGL-WIACS 17 E++F +K Y ++ W S S NS+H W W++ EK + L W+AC+ Sbjct 115 EDAFIWHHNKNGVYTTKSGYKWLLSQSGSANNSNHSWSWIWRFKVPEKYKFLIWLACN 172 >gi|92872886|gb|ABE81418.1| non-LTR retrolelement reverse transcriptase-like protein [Medicago truncatula] Length=631 Score = 30.8 bits (68), Expect = 2.9 Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 10/78 (12%) Frame = -1 Query 516 GFTNRSGIQWPFSNKVSAVPR---LMNFNFPQGDKIKKIGSDALVS--PGFMPISTADAA 352 G ++ W N+ VP +F F D + +I + VS PG + +S Sbjct 106 GLASKLSKVWKMINQWKMVPLGKGYYDFLFEHSDDLSRIWTAGTVSLQPGLLRLS----- 160 Query 351 EVQKSFNHNRQGGSHFSL 298 + K FNHN Q +H SL Sbjct 161 QWTKDFNHNSQAQTHASL 178
  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 15, 2007  4:53 AM
  Number of letters in database: 101,054,579
  Number of sequences in database:  283,349
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283349
Number of Hits to DB: 307
Number of extensions: 4
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 525
Length of database: 101054579
Length adjustment: 106
Effective length of query: 419
Effective length of database: 71019585
Effective search space: 4900351365
Effective search space used: 4900351365
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 63 (28.9 bits)