Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168926613-6948-107520875431.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig12 Length=592
Score E Sequences producing significant alignments: (Bits) Value gi|20161472|dbj|BAB90396.1| ADP-ribosylation factor [Oryza sa... 307 2e-83 gi|47026845|gb|AAT08648.1| ADP-ribosylation factor [Hyacinthus o 305 1e-82 gi|108711707|gb|ABF99502.1| ADP-ribosylation factor, putative... 304 1e-82 gi|39653273|gb|AAR29293.1| ADP-ribosylation factor [Medicago ... 304 1e-82 gi|115456151|ref|NP_001051676.1| Os03g0811900 [Oryza sativa (... 304 1e-82 gi|76160966|gb|ABA40446.1| unknown [Solanum tuberosum] 304 1e-82 gi|115435820|ref|NP_001042668.1| Os01g0265100 [Oryza sativa (... 303 3e-82 gi|52548250|gb|AAU82112.1| ADP-ribosylation factor [Triticum aes 303 4e-82 gi|77812440|gb|ABB03801.1| ADP ribosylation factor 002 [Daucu... 303 4e-82 gi|115440639|ref|NP_001044599.1| Os01g0813400 [Oryza sativa (... 303 4e-82 gi|115464585|ref|NP_001055892.1| Os05g0489600 [Oryza sativa (... 303 4e-82 gi|11131026|sp|O48920|ARF_VIGUN ADP-ribosylation factor >gi|2... 303 4e-82 gi|15241463|ref|NP_196971.1| ATARFA1B; GTP binding [Arabidops... 302 5e-82 gi|1351974|sp|P49076|ARF_MAIZE ADP-ribosylation factor >gi|55... 301 9e-82 gi|77999251|gb|ABB16972.1| ADP-ribosylation factor 1-like pro... 301 1e-81 gi|30681825|ref|NP_172533.2| GTP binding [Arabidopsis thalian... 301 1e-81 gi|8778579|gb|AAF79587.1|AC007945_7 F28C11.12 [Arabidopsis thali 301 1e-81 gi|6573751|gb|AAF17671.1|AC009398_20 F20B24.7 [Arabidopsis thali 301 1e-81 gi|15223164|ref|NP_177206.1| unknown protein [Arabidopsis tha... 301 1e-81 gi|25294174|pir||E86368 F5O8.5 protein - Arabidopsis thaliana... 301 1e-81 gi|17154685|emb|CAD12855.1| ADP-ribosylation factor [Gossypiu... 301 1e-81 gi|1703375|sp|P51822|ARF1_DAUCA ADP-ribosylation factor 1 >gi... 300 2e-81 gi|7643794|gb|AAF65512.1| ADP-ribosylation factor [Capsicum a... 300 3e-81 gi|76160984|gb|ABA40455.1| ARF-like small GTPase-like protein... 300 3e-81 gi|15226521|ref|NP_182239.1| ARF1 (ADP-RIBOSYLATION FACTOR 1)... 300 3e-81 gi|38353642|gb|AAR18698.1| ADP-ribosylation factor 1 [Populus to 300 3e-81 gi|115471217|ref|NP_001059207.1| Os07g0223400 [Oryza sativa (... 300 3e-81 gi|89475524|gb|ABD73294.1| ADP-ribosylation factor-like protein 299 6e-81 gi|15228723|ref|NP_191788.1| GTP binding [Arabidopsis thalian... 299 6e-81 gi|115501471|dbj|BAF34209.1| ADP ribosylation factor [Nicotiana 298 7e-81 gi|29028256|gb|AAO62347.1| ARF1-like GTP-binding protein [Gossyp 298 1e-80 gi|37932258|gb|AAP69821.1| ARF [Oryza sativa (japonica cultivar- 298 1e-80 gi|4324967|gb|AAD17207.1| ADP-ribosylation factor [Glycine max] 297 2e-80 gi|47026876|gb|AAT08663.1| ADP-ribosylation factor [Hyacinthus o 296 5e-80 gi|11131023|sp|O48649|ARF1_SALBA ADP-ribosylation factor 1 >g... 295 8e-80 gi|116060895|emb|CAL57373.1| unnamed protein product [Ostreococc 295 1e-79 gi|1703374|sp|P51821|ARF1_CHLRE ADP-ribosylation factor 1 >gi... 295 1e-79 gi|3182919|sp|O23778|ARF1_CATRO ADP-ribosylation factor 1 >gi... 294 2e-79 gi|29124979|gb|AAO63779.1| ADP-ribosylation factor 1 [Populus tr 292 7e-79 gi|1703376|sp|P51824|ARF1_SOLTU ADP-ribosylation factor 1 >gi... 289 5e-78 gi|92885316|gb|ABE87751.1| Ras GTPase; ARF/SAR superfamily [Medi 272 7e-73 gi|82621126|gb|ABB86251.1| ADP-ribosylation factor 1-like [Solan 267 2e-71 gi|82621154|gb|ABB86265.1| ADP-ribosylation factor-like [Solanum 266 4e-71 gi|47026953|gb|AAT08696.1| ADP-ribosylation factor [Hyacinthus o 231 1e-60 gi|15226086|ref|NP_179133.1| ATARFB1A; GTP binding [Arabidops... 218 2e-56 gi|92875403|gb|ABE83396.1| Guanine nucleotide binding protein... 206 5e-53 gi|115475543|ref|NP_001061368.1| Os08g0248900 [Oryza sativa (... 205 1e-52 gi|30682545|ref|NP_850057.1| GTP binding / guanyl nucleotide ... 202 7e-52 gi|3182922|sp|Q96361|ARF1_BRARP ADP-ribosylation factor 1 >gi... 201 2e-51 gi|92890621|gb|ABE90431.1| Ras GTPase [Medicago truncatula] 199 8e-51 gi|115483682|ref|NP_001065511.1| Os10g0580200 [Oryza sativa (... 197 2e-50 gi|41052966|dbj|BAD07876.1| putative ADP-ribosylation factor ... 197 2e-50 gi|15228464|ref|NP_186962.1| ATARFB1C; GTP binding [Arabidops... 196 5e-50 gi|15237901|ref|NP_197208.1| GTP binding [Arabidopsis thalian... 196 7e-50 gi|92893756|gb|ABE91892.1| Ras GTPase [Medicago truncatula] 193 3e-49 gi|58220034|gb|AAW67545.1| ADP-ribosylation factor [Daucus carot 193 3e-49 gi|115443985|ref|NP_001045772.1| Os02g0128600 [Oryza sativa (... 189 6e-48 gi|84796043|gb|ABC66109.1| putative ADP ribosylation factor 1 [Z 188 1e-47 gi|116055791|emb|CAL57876.1| GTP-binding ADP-ribosylation fac... 187 2e-47 gi|78709066|gb|ABB48041.1| ADP-ribosylation factor, putative,... 183 3e-46 gi|7248402|dbj|BAA92725.1| putative ADP-ribosylation factor [... 179 5e-45 gi|1184987|gb|AAA87885.1| NTGB1 [Nicotiana tabacum] 179 9e-45 gi|32401906|gb|AAP80941.1| ADP-ribosylation factor [Gossypium ba 177 3e-44 gi|92890620|gb|ABE90430.1| Ras GTPase [Medicago truncatula] 176 4e-44 gi|89257442|gb|ABD64934.1| ADP-ribosylation factor, putative [Br 173 4e-43 gi|15228912|ref|NP_188935.1| ATARFC1; GTP binding [Arabidopsi... 169 5e-42 gi|108711708|gb|ABF99503.1| ADP-ribosylation factor, putative... 161 2e-40 gi|115486053|ref|NP_001068170.1| Os11g0586900 [Oryza sativa (... 163 4e-40 gi|110289664|gb|AAP55187.2| ADP-ribosylation factor, putative... 161 2e-39 gi|115448099|ref|NP_001047829.1| Os02g0699300 [Oryza sativa (... 143 5e-34 gi|115445861|ref|NP_001046710.1| Os02g0327100 [Oryza sativa (... 140 3e-33 gi|9857537|gb|AAG00892.1|AC064879_10 Similar to ADP-ribosylation 137 2e-32 gi|18378965|ref|NP_563652.1| ATARFD1A; GTP binding [Arabidopsis 132 7e-31 gi|15224165|ref|NP_179430.1| TTN5 (TITAN 5); GTP binding [Ara... 131 2e-30 gi|116057640|emb|CAL53843.1| GTP-binding ADP-ribosylation fac... 125 1e-28 gi|15242939|ref|NP_200034.1| ATGB1 [Arabidopsis thaliana] >gi... 111 2e-24 gi|115453365|ref|NP_001050283.1| Os03g0392300 [Oryza sativa (... 110 5e-24 gi|22331720|ref|NP_190556.2| ATARLA1C; GTP binding [Arabidops... 109 6e-24 gi|21553780|gb|AAM62873.1| GTP-binding protein-like [Arabidopsis 108 1e-23 gi|18425204|ref|NP_569051.1| ATARLA1D; GTP binding [Arabidops... 108 2e-23 gi|42561632|ref|NP_171745.2| ATARFD1B; GTP binding [Arabidopsis 108 2e-23 gi|28466895|gb|AAO44056.1| At1g02430 [Arabidopsis thaliana] 107 2e-23 gi|115451383|ref|NP_001049292.1| Os03g0200800 [Oryza sativa (... 107 4e-23 gi|115448495|ref|NP_001048027.1| Os02g0732500 [Oryza sativa (... 107 4e-23 gi|18421676|ref|NP_568553.1| ATARLA1A; GTP binding [Arabidops... 106 5e-23 gi|115473403|ref|NP_001060300.1| Os07g0620400 [Oryza sativa (... 105 2e-22 gi|20197875|gb|AAM15297.1| ADP-ribosylation factor 3 [Arabido... 103 4e-22 gi|9757877|dbj|BAB08464.1| ADP-ribosylation factor-like protein 100 3e-21 gi|9757978|dbj|BAB08314.1| ADP-ribosylation factor-like protein 99.4 9e-21 gi|2961178|gb|AAC05675.1| GTP-binding protein [Oryza sativa] 98.2 2e-20 gi|78191446|gb|ABB29944.1| GTPase-like [Solanum tuberosum] 97.8 3e-20 gi|1710851|sp|P52884|SAR2_LYCES GTP-binding protein SAR2 >gi|473 97.8 3e-20 gi|15229626|ref|NP_190555.1| ATARLA1B; GTP binding [Arabidops... 96.3 7e-20 gi|77999253|gb|ABB16973.1| GTPase-like protein [Solanum tuberosu 96.3 7e-20 gi|3450893|gb|AAC32610.1| ras-like small monomeric GTP-binding p 94.7 2e-19 gi|28630917|gb|AAO45615.1| ADP-ribosylation factor [Gossypium hi 92.8 8e-19 gi|15217457|ref|NP_172390.1| ATSAR1/ATSARA1A; GTP binding [Ar... 92.8 8e-19 gi|15228793|ref|NP_191815.1| GTP binding [Arabidopsis thalian... 92.4 1e-18 gi|115436368|ref|NP_001042942.1| Os01g0338000 [Oryza sativa (... 92.4 1e-18 gi|76573331|gb|ABA46770.1| small GTP-binding protein Sar1BNt-... 91.7 2e-18
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 433 Number of extensions: 2 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 592 Length of database: 101054579 Length adjustment: 107 Effective length of query: 485 Effective length of database: 70736236 Effective search space: 6366261240 Effective search space used: 6366261240 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 64 (29.3 bits)