Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168929806-24142-207065966540.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig124 Length=290
Score E Sequences producing significant alignments: (Bits) Value gi|15241574|ref|NP_196446.1| YLS8; catalytic/ electron transp... 149 3e-36 gi|115471075|ref|NP_001059136.1| Os07g0202300 [Oryza sativa (... 149 4e-36 gi|115482620|ref|NP_001064903.1| Os10g0486600 [Oryza sativa (... 149 4e-36 gi|92871418|gb|ABE80406.1| Thioredoxin domain 2 [Medicago trunca 148 5e-36 gi|92887813|gb|ABE89054.1| Thioredoxin domain 2 [Medicago trunca 147 8e-36 gi|21537271|gb|AAM61612.1| putative thioredoxin-like U5 small... 147 1e-35 gi|32493106|gb|AAP85544.1| putative DIM-like protein [Glycine ma 134 1e-31 gi|102139934|gb|ABF70077.1| spliceosomal U5 snRNP-specific 15... 70.1 7e-21 gi|77799152|gb|ABB03719.1| putative thioredoxin [Sorghum bicolor 60.5 2e-09 gi|55741113|gb|AAV64251.1| hypothetical protein N9009 [Zea mays] 50.8 1e-06 gi|79416715|ref|NP_189117.2| catalytic/ electron transporter ... 48.5 7e-06 gi|51970440|dbj|BAD43912.1| hypothetical protein [Arabidopsis th 48.5 7e-06 gi|55741068|gb|AAV64210.1| hypothetical protein N9009 [Zea mays] 45.8 4e-05 gi|115485167|ref|NP_001067727.1| Os11g0297900 [Oryza sativa (... 44.7 1e-04 gi|11994656|dbj|BAB02884.1| unnamed protein product [Arabidopsis 30.8 1.5 gi|55168112|gb|AAV43980.1| hypothetical protein [Oryza sativa (j 29.6 3.3 gi|115482778|ref|NP_001064982.1| Os10g0500700 [Oryza sativa (... 28.5 7.3 gi|92868848|gb|ABE78807.1| unnamed protein product; gene_id:M... 28.5 7.3 gi|87241208|gb|ABD33066.1| Zinc finger, FYVE/PHD-type [Medicago 28.5 7.3 gi|78708863|gb|ABB47838.1| glutaredoxin-related protein, expr... 28.5 7.3 gi|122063509|sp|Q0IWL9|GRS11_ORYSA Monothiol glutaredoxin-S11... 28.5 7.3 gi|53791468|dbj|BAD52520.1| putative ABC1 protein [Oryza sativa 28.1 9.5 gi|33304608|gb|AAQ02685.1| PDR-type ABC transporter 9 [Oryza ... 28.1 9.5 gi|3132478|gb|AAC16267.1| hypothetical protein [Arabidopsis thal 28.1 9.5 gi|15077146|gb|AAK83084.1|AF289256_1 nuclear matrix protein 1 [Z 28.1 9.5 gi|115448891|ref|NP_001048225.1| Os02g0766700 [Oryza sativa (... 28.1 9.5 gi|115443629|ref|NP_001045594.1| Os02g0102000 [Oryza sativa (... 28.1 9.5 gi|115438436|ref|NP_001043539.1| Os01g0609300 [Oryza sativa (... 28.1 9.5 gi|30686165|ref|NP_181014.2| unknown protein [Arabidopsis tha... 28.1 9.5
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 225 Number of extensions: 2 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 290 Length of database: 101054579 Length adjustment: 66 Effective length of query: 224 Effective length of database: 82353545 Effective search space: 2470606350 Effective search space used: 2470606350 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 61 (28.1 bits)