Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168930139-1817-102952379610.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig128 Length=524
Score E Sequences producing significant alignments: (Bits) Value gi|15218348|ref|NP_177964.1| unknown protein [Arabidopsis tha... 162 5e-40 gi|110738443|dbj|BAF01147.1| hypothetical protein [Arabidopsis t 157 2e-38 gi|18394444|ref|NP_564015.1| unknown protein [Arabidopsis tha... 157 2e-38 gi|109288132|gb|ABG29109.1| myosin heavy chain 1 [Oryza sativa ( 99.8 5e-21 gi|29367581|gb|AAO72652.1| myosin heavy chain-like protein [O... 97.8 2e-20 gi|77539078|emb|CAD89535.1| myosin heavy chain-like protein [... 97.8 2e-20 gi|113205231|gb|AAT39303.2| Myosin heavy chain-like protein, put 69.7 6e-12 gi|115461811|ref|NP_001054505.1| Os05g0122600 [Oryza sativa (... 63.2 5e-10 gi|77539080|emb|CAD89536.1| rid2 protein [Oryza sativa (japonica 63.2 5e-10 gi|92868229|gb|ABE78300.1| Serine/threonine dehydratase, pyri... 62.8 7e-10 gi|115440875|ref|NP_001044717.1| Os01g0834100 [Oryza sativa (... 60.5 3e-09 gi|109288134|gb|ABG29110.1| myosin heavy chain 2 [Oryza sativa ( 60.5 3e-09 gi|56202323|dbj|BAD73782.1| putative P70 protein [Oryza sativa ( 60.5 3e-09 gi|115464871|ref|NP_001056035.1| Os05g0514500 [Oryza sativa (... 60.1 4e-09 gi|51451351|gb|AAU03106.1| unknow protein [Oryza sativa (japonic 60.1 4e-09 gi|15228082|ref|NP_181245.1| unknown protein [Arabidopsis tha... 52.4 9e-07 gi|17978993|gb|AAL47457.1| AT3g53350/F4P12_50 [Arabidopsis th... 41.2 0.002 gi|22331765|ref|NP_190903.2| unknown protein [Arabidopsis thalia 41.2 0.002 gi|42572655|ref|NP_974423.1| unknown protein [Arabidopsis tha... 41.2 0.002 gi|116056604|emb|CAL52893.1| unnamed protein product [Ostreococc 34.3 0.26 gi|15241831|ref|NP_201047.1| SMC2 (STRUCTURAL MAINTENANCE OF ... 33.5 0.45 gi|1619921|gb|AAC31756.1| heat shock transcription factor 4 [Ara 33.5 0.45 gi|115476824|ref|NP_001062008.1| Os08g0468400 [Oryza sativa (... 33.5 0.45 gi|15220725|ref|NP_174322.1| DNA binding [Arabidopsis thalian... 33.5 0.45 gi|15234583|ref|NP_195416.1| HSF4 (HEAT SHOCK FACTOR 4); DNA ... 33.5 0.45 gi|116311040|emb|CAH67971.1| OSIGBa0142I02-OSIGBa0101B20.14 [... 33.1 0.59 gi|116055886|emb|CAL57971.1| Isochorismate synthase (ISS) [Ostre 33.1 0.59 gi|115460228|ref|NP_001053714.1| Os04g0592400 [Oryza sativa (... 33.1 0.59 gi|15239100|ref|NP_199102.1| unknown protein [Arabidopsis tha... 32.7 0.77 gi|47900423|gb|AAT39217.1| hypothetical protein [Oryza sativa (j 32.3 1.0 gi|18422225|ref|NP_568607.1| unknown protein [Arabidopsis tha... 32.3 1.0 gi|21553655|gb|AAM62748.1| unknown [Arabidopsis thaliana] 32.3 1.0 gi|2388564|gb|AAB71445.1| ESTs gb|AA042402,gb|ATTS1380 come ... 32.3 1.0 gi|30679235|ref|NP_172024.2| unknown protein [Arabidopsis tha... 32.3 1.0 gi|9759015|dbj|BAB09328.1| unnamed protein product [Arabidopsis 32.3 1.0 gi|6689616|emb|CAB65536.1| proline-rich protein [Zea mays] 32.3 1.0 gi|116059590|emb|CAL55297.1| Molecular chaperone Prefoldin, s... 32.0 1.3 gi|106879577|emb|CAJ38372.1| bZIP transcription factor [Plantago 31.6 1.7 gi|42573800|ref|NP_974996.1| unknown protein [Arabidopsis thalia 31.6 1.7 gi|115480858|ref|NP_001064022.1| Os10g0104800 [Oryza sativa (... 31.6 1.7 gi|18424920|ref|NP_569007.1| unknown protein [Arabidopsis tha... 31.6 1.7 gi|115439231|ref|NP_001043895.1| Os01g0685200 [Oryza sativa (... 31.2 2.2 gi|14279543|gb|AAK58634.1|AF271731_1 SMC2-like condensin [Ara... 31.2 2.2 gi|12382276|gb|AAG53093.1|AF306547_1 SMC2-1 [Arabidopsis thalian 31.2 2.2 gi|62421780|gb|AAX82555.1| 120 kDa pistil extensin-like protein 31.2 2.2 gi|115451891|ref|NP_001049546.1| Os03g0246900 [Oryza sativa (... 25.0 3.3 gi|116058599|emb|CAL54306.1| Myosin class II heavy chain (ISS) [ 30.4 3.8 gi|92887215|gb|ABE88733.1| Zinc finger, TTF-type; HAT dimerisati 30.4 3.8 gi|91176404|gb|ABE26625.1| Zinc finger, TTF-type [Medicago tr... 30.4 3.8 gi|2653671|gb|AAC15893.1| 120 kDa style glycoprotein [Nicotiana 30.4 3.8 gi|62421773|gb|AAX82551.1| 120 kDa pistil extensin-like protein 30.4 3.8 gi|62421765|gb|AAX82548.1| 120 kDa pistil extensin-like protein 30.4 3.8 gi|62421769|gb|AAX82550.1| 120 kDa pistil extensin-like protein 30.4 3.8 gi|62421778|gb|AAX82554.1| 120 kDa pistil extensin-like protein 30.4 3.8 gi|15222664|ref|NP_176614.1| unknown protein [Arabidopsis tha... 30.4 3.8 gi|115458346|ref|NP_001052773.1| Os04g0418800 [Oryza sativa (... 30.0 5.0 gi|33187361|gb|AAO86635.1| phantastica transcription factor [Fra 30.0 5.0 gi|72384407|gb|AAZ67523.1| 4D11_9 [Brassica rapa subsp. pekinens 30.0 5.0 gi|42567760|ref|NP_196563.2| unknown protein [Arabidopsis thalia 30.0 5.0 gi|42572143|ref|NP_974162.1| unknown protein [Arabidopsis tha... 30.0 5.0 gi|30699270|ref|NP_177881.2| unknown protein [Arabidopsis tha... 30.0 5.0 gi|45735883|dbj|BAD12916.1| hypothetical protein [Oryza sativ... 30.0 5.0 gi|38605837|emb|CAE02917.3| OSJNBb0108J11.9 [Oryza sativa (japon 30.0 5.0 gi|11022651|dbj|BAB17025.1| unnamed protein product [Arabidopsis 30.0 5.0 gi|15233367|ref|NP_195311.1| ATGB2 (GTP-BINDING 2); GTP bindi... 30.0 5.0 gi|114205376|gb|AAD23383.3|AF108140_1 gamete-specific homeodo... 29.6 6.5 gi|110349057|gb|ABG73096.1| phantastica [Fraxinus excelsior] ... 29.6 6.5 gi|110349073|gb|ABG73104.1| phantastica [Fraxinus excelsior] 29.6 6.5 gi|110349075|gb|ABG73105.1| phantastica [Fraxinus excelsior] 29.6 6.5 gi|110349061|gb|ABG73098.1| phantastica [Fraxinus excelsior] ... 29.6 6.5 gi|45735904|dbj|BAD12936.1| hypothetical protein [Oryza sativa ( 29.6 6.5 gi|115457018|ref|NP_001052109.1| Os04g0142400 [Oryza sativa (... 29.6 6.5 gi|116309955|emb|CAH66985.1| H0505F09.1 [Oryza sativa (indica cu 29.3 8.5 gi|116309281|emb|CAH66372.1| OSIGBa0130K07.8 [Oryza sativa (indi 29.3 8.5 gi|116057086|emb|CAL51513.1| Myosin class II heavy chain (ISS) [ 29.3 8.5 gi|90657592|gb|ABD96891.1| hypothetical protein [Cleome spinosa] 29.3 8.5 gi|38569196|emb|CAE75876.1| OSJNBa0086B14.27 [Oryza sativa (japo 29.3 8.5 gi|115458704|ref|NP_001052952.1| Os04g0452500 [Oryza sativa (... 29.3 8.5 gi|2245081|emb|CAB10503.1| myosin II heavy chain like protein [A 29.3 8.5 gi|2578444|emb|CAA47812.1| ptxA [Pisum sativum] 29.3 8.5 gi|7268474|emb|CAB78725.1| putative protein [Arabidopsis thalian 29.3 8.5 gi|18423700|ref|NP_568819.1| MYB120; DNA binding / transcript... 29.3 8.5 gi|77553467|gb|ABA96263.1| hypothetical protein LOC_Os12g0211... 29.3 8.5 gi|115482574|ref|NP_001064880.1| Os10g0481500 [Oryza sativa (... 29.3 8.5 gi|56202200|dbj|BAD73799.1| hypothetical protein [Oryza sativa ( 29.3 8.5 gi|54290670|dbj|BAD62261.1| hypothetical protein [Oryza sativa ( 29.3 8.5 gi|47827092|dbj|BAD21122.1| ATP-dependent RNA helicase [Hordeum 29.3 8.5 gi|18414724|ref|NP_568144.1| RTM2 (RESTRICTED TEV MOVEMENT 2)... 29.3 8.5 gi|10177377|dbj|BAB10576.1| unnamed protein product [Arabidopsis 29.3 8.5 gi|19923|emb|CAA78394.1| pistil extensin like protein, partial C 29.3 8.5 gi|25453522|pir||T52410 blue copper-binding protein II [impor... 29.3 8.5 gi|30683971|ref|NP_193455.2| ATMAP70-5; microtubule binding [... 29.3 8.5 gi|25453521|pir||T52408 blue copper-binding protein II [impor... 29.3 8.5
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 404 Number of extensions: 4 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 524 Length of database: 101054579 Length adjustment: 105 Effective length of query: 419 Effective length of database: 71302934 Effective search space: 4919902446 Effective search space used: 4919902446 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 63 (28.9 bits)