RID=1168930166-16736-142480443436.BLASTQ1, Contig130

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168930166-16736-142480443436.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Score E Sequences producing significant alignments: (Bits) Value gi|67633714|gb|AAY78781.1| senescence-associated protein-related 30.8 1.5

gi|52546922|gb|AAU81594.1| cysteine proteinase [Petunia x hybrid 28.9 5.6 gi|22796547|emb|CAD23089.1| NADH dehydrogenase subunit F [Icacin 28.5 7.3 gi|17932807|emb|CAC85140.1| NADH dehydrogenase subunit F [Icacin 28.5 7.3 gi|11558466|emb|CAC17784.1| NADH dehydrogenase subunit F [Icacin 28.5 7.3

Alignments

 

>gi|67633714|gb|AAY78781.1|  senescence-associated protein-related [Arabidopsis thaliana]
Length=124

 Score = 30.8 bits (68),  Expect = 1.5
 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
 Frame = +2

Query  29   KKTRERERDCSIVKTSS--SAL*KKGRLGRDRNLVENMQHIDPSPNKSKANSCF  184
            K+ R ++  C + +  S   A  KKGR  +D    E +  I  SP+ S ++SCF
Sbjct  73   KQCRAKQMACDVFRDFSRQKANVKKGRTSKD----EGLDRISSSPSSSSSSSCF  122


>gi|52546922|gb|AAU81594.1|  cysteine proteinase [Petunia x hybrida]
Length=167

 Score = 28.9 bits (63),  Expect = 5.6
 Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 7/51 (13%)
 Frame = -2

Query  135  IFSTRFLSLPNLPFFHSALLLVLTMEQS---LSLSLVFF----SIASNLSV  4
            I+S+ F+ LPNL  FHS    + T   S   +SL L+FF    S AS++S+
Sbjct  13   IYSSYFIFLPNLFSFHSFPSNMATHNNSTFTISLLLLFFIFSLSYASDMSI  63


>gi|22796547|emb|CAD23089.1|  NADH dehydrogenase subunit F [Icacina senegalensis]
Length=705

 Score = 28.5 bits (62),  Expect = 7.3
 Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
 Frame = -2

Query  162  LLGEGSMCCIFSTRFLSLPNLPFFHSALLLVLTMEQSLSLSL  37
            L+G G +  +F T   +L  +  FHS LLL +TM  S++LS+
Sbjct  12   LIGVGLL--LFPTATKNLRRMWTFHSVLLLSITMAFSINLSI  51


>gi|17932807|emb|CAC85140.1|  NADH dehydrogenase subunit F [Icacina senegalensis]
Length=740

 Score = 28.5 bits (62),  Expect = 7.3
 Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
 Frame = -2

Query  162  LLGEGSMCCIFSTRFLSLPNLPFFHSALLLVLTMEQSLSLSL  37
            L+G G +  +F T   +L  +  FHS LLL +TM  S++LS+
Sbjct  12   LIGVGLL--LFPTATKNLRRMWTFHSVLLLSITMAFSINLSI  51


>gi|11558466|emb|CAC17784.1|  NADH dehydrogenase subunit F [Icacina mannii]
Length=709

 Score = 28.5 bits (62),  Expect = 7.3
 Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
 Frame = -2

Query  162  LLGEGSMCCIFSTRFLSLPNLPFFHSALLLVLTMEQSLSLSL  37
            L+G G +  +F T   +L  +  FHS LLL +TM  S++LS+
Sbjct  19   LIGVGLL--LFPTATKNLRRMWTFHSVLLLSITMAFSINLSI  58

Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 217 Number of extensions: 1 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 283 Length of database: 101054579 Length adjustment: 64 Effective length of query: 219 Effective length of database: 82920243 Effective search space: 2487607290 Effective search space used: 2487607290 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 61 (28.1 bits)

Distribution of 5 Blast Hits on the Query Sequence