Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168930372-26018-18824364617.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig139 Length=280
Score E Sequences producing significant alignments: (Bits) Value gi|87241443|gb|ABD33301.1| N-acetylglucosaminyl transferase c... 79.7 3e-15 gi|62321116|dbj|BAD94224.1| hypothetical protein [Arabidopsis th 67.0 2e-11 gi|6911887|emb|CAB72187.1| putative protein [Arabidopsis thalian 67.0 2e-11 gi|42565988|ref|NP_191276.2| phosphatidylinositol N-acetylglu... 67.0 2e-11 gi|115477761|ref|NP_001062476.1| Os08g0556500 [Oryza sativa (... 28.9 5.6 gi|42407935|dbj|BAD09074.1| putative peroxisome biogenesis pr... 28.9 5.6 gi|15232777|ref|NP_190319.1| oxidoreductase [Arabidopsis thal... 28.5 7.4 gi|57869473|gb|AAW57574.1| NADH dehydrogenase subunit F [Cremant 28.5 7.4 gi|18399819|ref|NP_565521.1| GTP binding [Arabidopsis thalian... 28.1 9.6
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.317 0.133 0.386 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 239 Number of extensions: 2 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 280 Length of database: 101054579 Length adjustment: 63 Effective length of query: 217 Effective length of database: 83203592 Effective search space: 2496107760 Effective search space used: 2496107760 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 61 (28.1 bits)