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BLASTX 2.2.15 [Oct-15-2006] 
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman 
(1997), "Gapped BLAST and PSI-BLAST: a new generation of 
protein database search programs", Nucleic Acids Res. 25:3389-3402.

RID: 1168926662-9106-101497418751.BLASTQ1


Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
           4,458,890 sequences; 1,532,996,420 total letters

 
If you have any problems or questions with the results of this search 
please refer to the BLAST FAQs
Taxonomy reports

Query=  Contig14
Length=671

Distribution of 148 Blast Hits on the Query Sequence


                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|1169228|sp|P46942|DB10_NICSY  ATP-dependent RNA helicase-li...   248    8e-89
gi|7573310|emb|CAB87628.1|  DRH1 DEAD box protein-like [Arabidops   241    1e-88
gi|79513425|ref|NP_196965.2|  ATP binding / ATP-dependent heli...   241    1e-88 UniGene infoGene info
gi|114153757|sp|Q9LYJ9|RH46_ARATH  Probable DEAD-box ATP-dependen   241    1e-88
gi|110737546|dbj|BAF00715.1|  DRH1 DEAD box protein - like [Arabi   241    1e-88
gi|17065030|gb|AAL32669.1|  RNA helicase, DRH1 [Arabidopsis thali   237    1e-86 UniGene info
gi|18395852|ref|NP_566141.1|  DRH1 [Arabidopsis thaliana] >gi|...   237    1e-86 UniGene infoGene info
gi|30678365|ref|NP_850492.1|  DRH1 [Arabidopsis thaliana] >gi|...   237    1e-86 UniGene infoGene info
gi|23397305|gb|AAN31934.1|  putative RNA helicase, DRH1 [Arabidop   237    1e-86 UniGene info
gi|115434786|ref|NP_001042151.1|  Os01g0172200 [Oryza sativa (...   243    2e-86 Gene info
gi|55296348|dbj|BAD68264.1|  putative p68 RNA helicase [Oryza ...   243    2e-86 Gene info
gi|92894148|gb|ABE92110.1|  WW/Rsp5/WWP; Helicase, C-terminal [Me   239    4e-85
gi|6137207|gb|AAF04377.1|AF188678_1  P72 DEAD box protein [Pisum    237    6e-85
gi|68037499|gb|AAY84883.1|  DEAD-box ATPase-RNA-helicase [Triticu   239    1e-84 UniGene infoGene info
gi|115437436|ref|NP_001043295.1|  Os01g0549400 [Oryza sativa (...   233    2e-80 Gene info
gi|57899404|dbj|BAD88051.1|  putative ATP-dependent RNA helica...   233    2e-80
gi|115486693|ref|NP_001068490.1|  Os11g0689400 [Oryza sativa (...   223    2e-79 Gene info
gi|77552592|gb|ABA95389.1|  retrotransposon protein, putative,...   223    2e-79
gi|15230730|ref|NP_187299.1|  ATP binding / ATP-dependent heli...   213    1e-77 UniGene infoGene info
gi|115435080|ref|NP_001042298.1|  Os01g0197200 [Oryza sativa (...   148    2e-44 Gene info
gi|42573778|ref|NP_974985.1|  ATP binding / ATP-dependent heli...   152    3e-44 UniGene infoGene info
gi|10177293|dbj|BAB10554.1|  ATP-dependent RNA helicase-like prot   152    3e-44
gi|15221998|ref|NP_175911.1|  ATP binding / ATP-dependent heli...   149    7e-44 UniGene infoGene info
gi|39653663|gb|AAR29370.1|  DEAD box RNA helicase [Zea mays]        150    1e-43 UniGene infoGene info
gi|3776029|emb|CAA09215.1|  RNA helicase [Arabidopsis thaliana]     128    5e-37 UniGene info
gi|116059913|emb|CAL55972.1|  DEAD-box protein abstrakt (ISS) [Os   120    7e-37
gi|116055884|emb|CAL57969.1|  DEAD-box protein abstrakt (ISS) [Os   122    6e-36
gi|3776013|emb|CAA09209.1|  RNA helicase [Arabidopsis thaliana]     149    9e-36 UniGene info
gi|56784388|dbj|BAD82427.1|  putative DEAD box RNA helicase [O...   148    2e-35
gi|5669638|gb|AAD46404.1|AF096248_1  ethylene-responsive RNA heli   147    3e-35 UniGene infoGene info
gi|12323177|gb|AAG51573.1|AC027034_19  RNA helicase, 5' partial;    144    2e-34
gi|116061203|emb|CAL56591.1|  ATP-dependent RNA helicase (ISS) [O   123    5e-33
gi|115474897|ref|NP_001061045.1|  Os08g0159900 [Oryza sativa (...   116    5e-32 Gene info
gi|15231074|ref|NP_191416.1|  ATP binding / ATP-dependent heli...   120    2e-30 UniGene infoGene info
gi|18410973|ref|NP_567067.1|  ATP binding / ATP-dependent heli...   119    7e-30 UniGene infoGene info
gi|17064740|gb|AAL32524.1|  ATP-dependent RNA helicase-like pr...   119    7e-30 UniGene info
gi|15227951|ref|NP_181780.1|  ATP binding / ATP-dependent heli...   116    1e-29 UniGene infoGene info
gi|28393424|gb|AAO42134.1|  putative DEAD/DEAH box RNA helicase [   116    1e-29 UniGene info
gi|6735368|emb|CAB68189.1|  ATP-dependent RNA helicase-like prote   114    4e-28
gi|115486155|ref|NP_001068221.1|  Os11g0599500 [Oryza sativa (...   123    7e-28 Gene info
gi|115471073|ref|NP_001059135.1|  Os07g0202100 [Oryza sativa (...   120    5e-27 Gene info
gi|116059391|emb|CAL55098.1|  DEAD-box protein abstrakt (ISS) [Os   107    5e-27
gi|3775999|emb|CAA09202.1|  RNA helicase [Arabidopsis thaliana]     119    8e-27 UniGene info
gi|115456051|ref|NP_001051626.1|  Os03g0805200 [Oryza sativa (...   118    2e-26 Gene info
gi|92888082|gb|ABE89166.1|  Helicase, C-terminal [Medicago trunca   115    1e-25
gi|116057517|emb|CAL51944.1|  DEAD-box protein abstrakt (ISS) [Os   104    1e-25
gi|15218071|ref|NP_173516.1|  ATP binding / ATP-dependent heli...   114    4e-25 UniGene infoGene info
gi|25083096|gb|AAN72041.1|  putative RNA helicase [Arabidopsis th   112    1e-24 UniGene info
gi|3775989|emb|CAA09197.1|  RNA helicase [Arabidopsis thaliana]     112    1e-24 UniGene info
gi|15222526|ref|NP_174479.1|  ATP binding / ATP-dependent heli...   112    1e-24 UniGene infoGene info
gi|116059530|emb|CAL55237.1|  DEAD-box protein abstrakt (ISS) [Os   112    2e-24
gi|115468814|ref|NP_001058006.1|  Os06g0602400 [Oryza sativa (...   110    4e-24 Gene info
gi|51090883|dbj|BAD35456.1|  putative DEAD-box protein 3 [Oryz...   110    4e-24
gi|32352202|dbj|BAC78594.1|  RNA helicase [Oryza sativa (japonica   109    8e-24 UniGene info
gi|115471651|ref|NP_001059424.1|  Os07g0301200 [Oryza sativa (...   109    8e-24 Gene info
gi|116059345|emb|CAL55052.1|  DEAD-box protein abstrakt (ISS) [Os  94.4    4e-23
gi|18424667|ref|NP_568964.1|  ATP binding / ATP-dependent heli...  81.6    4e-23 UniGene infoGene info
gi|92881987|gb|ABE86511.1|  Helicase, C-terminal [Medicago trunca   107    4e-23
gi|18407327|ref|NP_566099.1|  ATP binding / ATP-dependent heli...   107    5e-23 UniGene infoGene info
gi|15241415|ref|NP_199941.1|  ATP binding / ATP-dependent heli...   105    1e-22 UniGene infoGene info
gi|15234166|ref|NP_195063.1|  ATP binding / ATP-dependent heli...   105    2e-22 UniGene infoGene info
gi|110681482|emb|CAL25351.1|  dead-box helicase [Platanus x aceri   103    6e-22
gi|84468270|dbj|BAE71218.1|  putative DEAD-box protein abstrakt [   103    6e-22
gi|92867730|gb|ABE77883.1|  DEAD/DEAH box helicase, putative [...   103    8e-22
gi|8489871|gb|AAF75791.1|AF271892_1  DEAD box protein P68 [Pisum   89.4    9e-22
gi|115452607|ref|NP_001049904.1|  Os03g0308500 [Oryza sativa (...   102    2e-21 Gene info
gi|15226155|ref|NP_180929.1|  ATP binding / ATP-dependent heli...   101    2e-21 UniGene infoGene info
gi|92885772|gb|ABE87919.1|  Helicase, C-terminal [Medicago trunca  99.4    1e-20
gi|115454875|ref|NP_001051038.1|  Os03g0708600 [Oryza sativa (...  98.6    2e-20 Gene info
gi|15215678|gb|AAK91384.1|  AT3g19760/MMB12_21 [Arabidopsis th...  96.7    7e-20 UniGene info
gi|15230945|ref|NP_188610.1|  ATP binding / ATP-dependent heli...  96.7    7e-20 UniGene infoGene info
gi|3775985|emb|CAA09195.1|  RNA helicase [Arabidopsis thaliana...  96.7    7e-20 UniGene info
gi|115444241|ref|NP_001045900.1|  Os02g0150100 [Oryza sativa (...  95.9    1e-19 Gene info
gi|115453811|ref|NP_001050506.1|  Os03g0566800 [Oryza sativa (...  95.9    1e-19 Gene info
gi|115438787|ref|NP_001043673.1|  Os01g0639100 [Oryza sativa (...  95.9    1e-19 Gene info
gi|51535964|dbj|BAD38045.1|  putative DEAD-box protein abstrak...  95.9    1e-19
gi|1170511|sp|P41382|IF410_TOBAC  Eukaryotic initiation factor...  95.9    1e-19
gi|15228722|ref|NP_188870.1|  ATP binding / ATP-dependent heli...  92.4    1e-19 UniGene infoGene info
gi|3775995|emb|CAA09200.1|  RNA helicase [Arabidopsis thaliana]    92.4    1e-19 UniGene info
gi|84322402|gb|ABC55720.1|  putative RH2 protein [Zea mays]        95.1    2e-19 UniGene infoGene info
gi|116060920|emb|CAL57398.1|  ATP-dependent RNA helicase (ISS) [O  94.4    3e-19
gi|2500517|sp|Q40471|IF4A9_TOBAC  Eukaryotic initiation factor...  94.0    5e-19
gi|1170507|sp|P41380|IF4A3_NICPL  Eukaryotic initiation factor...  92.8    5e-19
gi|12325365|gb|AAG52624.1|AC024261_11  photosystem II protein ...  93.6    6e-19
gi|6635383|gb|AAF19805.1|  EIF4A protein [Brassica oleracea]       93.6    6e-19
gi|15223841|ref|NP_175549.1|  ATP binding / ATP-dependent heli...  93.6    6e-19 UniGene infoGene info
gi|2500520|sp|Q40467|IF414_TOBAC  Eukaryotic initiation factor...  93.6    6e-19
gi|38564733|gb|AAR23806.1|  initiation factor eIF4A-15 [Helianthu  93.2    8e-19 UniGene info
gi|2286151|gb|AAB64289.1|  translation initiation factor [Zea may  93.2    8e-19 UniGene infoGene info
gi|2500521|sp|Q40468|IF415_TOBAC  Eukaryotic initiation factor...  93.2    8e-19
gi|116060093|emb|CAL56152.1|  ATP-dependent RNA helicase (ISS) [O  84.3    8e-19
gi|4454799|gb|AAD20980.1|  translation initiation factor 4A2 [Zea  92.8    1e-18 UniGene info
gi|2500516|sp|Q40470|IF4A7_TOBAC  Eukaryotic initiation factor...  92.8    1e-18
gi|3776021|emb|CAA09211.1|  RNA helicase [Arabidopsis thaliana]    92.4    1e-18 UniGene info
gi|15218574|ref|NP_177417.1|  ATP binding / ATP-dependent heli...  92.4    1e-18 UniGene infoGene info
gi|115444197|ref|NP_001045878.1|  Os02g0146600 [Oryza sativa (...  92.0    2e-18 Gene info
gi|2500522|sp|Q41741|IF4A_MAIZE  Eukaryotic initiation factor ...  92.0    2e-18 Gene info
gi|116057264|emb|CAL51691.1|  DEAD-box protein abstrakt (ISS) [Os  91.7    2e-18
gi|92872732|gb|ABE81297.1|  Helicase, C-terminal [Medicago tru...  91.7    2e-18
gi|115470561|ref|NP_001058879.1|  Os07g0143700 [Oryza sativa (...  89.0    1e-17 Gene info
Alignments

>gi|1169228|sp|P46942|DB10_NICSY  ATP-dependent RNA helicase-like protein DB10
 gi|563986|dbj|BAA03763.1|  RNA helicase like protein DB10 [Nicotiana sylvestris]
Length=607

 Score =  248 bits (633),  Expect(2) = 8e-89
 Identities = 131/147 (89%), Positives = 139/147 (94%), Gaps = 0/147 (0%)
 Frame = -3

Query  492  QEPGSKIIIFCSTKKMCDQLARNLSRQFGAAAIHGDKSQADRDYVLSQFRTGRSPVLVAT  313
            +EPGSKIIIFCSTKKMCDQL+RNL+R FGAAAIHGDKSQ +RDYVLSQFR GRSPVLVAT
Sbjct  387  KEPGSKIIIFCSTKKMCDQLSRNLTRNFGAAAIHGDKSQGERDYVLSQFRAGRSPVLVAT  446

Query  312  DVAARGLDIKDIRVVINYDFPTGVEDYVHRIgrtgragatGLAYTFFGDQDSKYASDLIK  133
            DVAARGLDIKDIRVVINYDFPTG+EDYVHRIGRTGRAGA+GLAYTFF DQDSK+A DL+K
Sbjct  447  DVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGASGLAYTFFSDQDSKHALDLVK  506

Query  132  VLEGANQRVPAELRDMASRGGGMGRPR  52
            VLEGANQ VP ELRDMASRGGGMGR R
Sbjct  507  VLEGANQCVPTELRDMASRGGGMGRAR  533


 Score = 99.8 bits (247),  Expect(2) = 8e-89
 Identities = 50/66 (75%), Positives = 58/66 (87%), Gaps = 2/66 (3%)
 Frame = -2

Query  670  YPATWPREVRKIAADLLVNPVQVNIGNIDELVANKSITQYVEVLSPMENHRRLEQILRS-  494
            Y ATWP+ VRKIAADLLVN VQVNIGN+DELVANKSITQ++EV+ PME  RR+EQILRS 
Sbjct  328  YTATWPKGVRKIAADLLVNSVQVNIGNVDELVANKSITQHIEVVLPMEKQRRVEQILRSK  387

Query  493  -PGARI  479
             PG++I
Sbjct  388  EPGSKI  393


>gi|7573310|emb|CAB87628.1|  DRH1 DEAD box protein-like [Arabidopsis thaliana]
Length=713

 Score =  241 bits (614),  Expect(2) = 1e-88
 Identities = 129/155 (83%), Positives = 146/155 (94%), Gaps = 2/155 (1%)
 Frame = -3

Query  492  QEPGSKIIIFCSTKKMCDQLARNLSRQFGAAAIHGDKSQADRDYVLSQFRTGRSPVLVAT  313
            QEPGSKIIIFCSTK+MCDQLARNL+R FGAAAIHGDKSQA+RD VL+QFR+GR+PVLVAT
Sbjct  471  QEPGSKIIIFCSTKRMCDQLARNLTRTFGAAAIHGDKSQAERDDVLNQFRSGRTPVLVAT  530

Query  312  DVAARGLDIKDIRVVINYDFPTGVEDYVHRIgrtgragatGLAYTFFGDQDSKYASDLIK  133
            DVAARGLD+KDIRVV+NYDFP GVEDYVHRIGRTGRAGATGLAYTFFGDQD+K+ASDLIK
Sbjct  531  DVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFFGDQDAKHASDLIK  590

Query  132  VLEGANQRVPAELRDMASR-GGGMGRPRRW-APSS  34
            +LEGANQ+VP ++R+MA+R GGGM + RRW  PSS
Sbjct  591  ILEGANQKVPPQVREMATRGGGGMNKFRRWGTPSS  625


 Score =  106 bits (265),  Expect(2) = 1e-88
 Identities = 53/66 (80%), Positives = 59/66 (89%), Gaps = 2/66 (3%)
 Frame = -2

Query  670  YPATWPREVRKIAADLLVNPVQVNIGNIDELVANKSITQYVEVLSPMENHRRLEQILRS-  494
            Y ATWP+EVRKIAADLLVNP QVNIGN+DELVANKSITQ +EVL+PME H RLEQILRS 
Sbjct  412  YTATWPKEVRKIAADLLVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHSRLEQILRSQ  471

Query  493  -PGARI  479
             PG++I
Sbjct  472  EPGSKI  477


>gi|79513425|ref|NP_196965.2| UniGene infoGene info ATP binding / ATP-dependent helicase/ helicase/ nucleic acid 
binding [Arabidopsis thaliana]
Length=712

 Score =  241 bits (614),  Expect(2) = 1e-88
 Identities = 129/155 (83%), Positives = 146/155 (94%), Gaps = 2/155 (1%)
 Frame = -3

Query  492  QEPGSKIIIFCSTKKMCDQLARNLSRQFGAAAIHGDKSQADRDYVLSQFRTGRSPVLVAT  313
            QEPGSKIIIFCSTK+MCDQLARNL+R FGAAAIHGDKSQA+RD VL+QFR+GR+PVLVAT
Sbjct  471  QEPGSKIIIFCSTKRMCDQLARNLTRTFGAAAIHGDKSQAERDDVLNQFRSGRTPVLVAT  530

Query  312  DVAARGLDIKDIRVVINYDFPTGVEDYVHRIgrtgragatGLAYTFFGDQDSKYASDLIK  133
            DVAARGLD+KDIRVV+NYDFP GVEDYVHRIGRTGRAGATGLAYTFFGDQD+K+ASDLIK
Sbjct  531  DVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFFGDQDAKHASDLIK  590

Query  132  VLEGANQRVPAELRDMASR-GGGMGRPRRW-APSS  34
            +LEGANQ+VP ++R+MA+R GGGM + RRW  PSS
Sbjct  591  ILEGANQKVPPQVREMATRGGGGMNKFRRWGTPSS  625


 Score =  106 bits (265),  Expect(2) = 1e-88
 Identities = 53/66 (80%), Positives = 59/66 (89%), Gaps = 2/66 (3%)
 Frame = -2

Query  670  YPATWPREVRKIAADLLVNPVQVNIGNIDELVANKSITQYVEVLSPMENHRRLEQILRS-  494
            Y ATWP+EVRKIAADLLVNP QVNIGN+DELVANKSITQ +EVL+PME H RLEQILRS 
Sbjct  412  YTATWPKEVRKIAADLLVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHSRLEQILRSQ  471

Query  493  -PGARI  479
             PG++I
Sbjct  472  EPGSKI  477


>gi|114153757|sp|Q9LYJ9|RH46_ARATH  Probable DEAD-box ATP-dependent RNA helicase 46
Length=645

 Score =  241 bits (614),  Expect(2) = 1e-88
 Identities = 129/155 (83%), Positives = 146/155 (94%), Gaps = 2/155 (1%)
 Frame = -3

Query  492  QEPGSKIIIFCSTKKMCDQLARNLSRQFGAAAIHGDKSQADRDYVLSQFRTGRSPVLVAT  313
            QEPGSKIIIFCSTK+MCDQLARNL+R FGAAAIHGDKSQA+RD VL+QFR+GR+PVLVAT
Sbjct  403  QEPGSKIIIFCSTKRMCDQLARNLTRTFGAAAIHGDKSQAERDDVLNQFRSGRTPVLVAT  462

Query  312  DVAARGLDIKDIRVVINYDFPTGVEDYVHRIgrtgragatGLAYTFFGDQDSKYASDLIK  133
            DVAARGLD+KDIRVV+NYDFP GVEDYVHRIGRTGRAGATGLAYTFFGDQD+K+ASDLIK
Sbjct  463  DVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFFGDQDAKHASDLIK  522

Query  132  VLEGANQRVPAELRDMASR-GGGMGRPRRW-APSS  34
            +LEGANQ+VP ++R+MA+R GGGM + RRW  PSS
Sbjct  523  ILEGANQKVPPQVREMATRGGGGMNKFRRWGTPSS  557


 Score =  106 bits (265),  Expect(2) = 1e-88
 Identities = 53/66 (80%), Positives = 59/66 (89%), Gaps = 2/66 (3%)
 Frame = -2

Query  670  YPATWPREVRKIAADLLVNPVQVNIGNIDELVANKSITQYVEVLSPMENHRRLEQILRS-  494
            Y ATWP+EVRKIAADLLVNP QVNIGN+DELVANKSITQ +EVL+PME H RLEQILRS 
Sbjct  344  YTATWPKEVRKIAADLLVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHSRLEQILRSQ  403

Query  493  -PGARI  479
             PG++I
Sbjct  404  EPGSKI  409


>gi|110737546|dbj|BAF00715.1|  DRH1 DEAD box protein - like [Arabidopsis thaliana]
Length=450

 Score =  241 bits (614),  Expect(2) = 1e-88
 Identities = 129/155 (83%), Positives = 146/155 (94%), Gaps = 2/155 (1%)
 Frame = -3

Query  492  QEPGSKIIIFCSTKKMCDQLARNLSRQFGAAAIHGDKSQADRDYVLSQFRTGRSPVLVAT  313
            QEPGSKIIIFCSTK+MCDQLARNL+R FGAAAIHGDKSQA+RD VL+QFR+GR+PVLVAT
Sbjct  208  QEPGSKIIIFCSTKRMCDQLARNLTRTFGAAAIHGDKSQAERDDVLNQFRSGRTPVLVAT  267

Query  312  DVAARGLDIKDIRVVINYDFPTGVEDYVHRIgrtgragatGLAYTFFGDQDSKYASDLIK  133
            DVAARGLD+KDIRVV+NYDFP GVEDYVHRIGRTGRAGATGLAYTFFGDQD+K+ASDLIK
Sbjct  268  DVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFFGDQDAKHASDLIK  327

Query  132  VLEGANQRVPAELRDMASR-GGGMGRPRRW-APSS  34
            +LEGANQ+VP ++R+MA+R GGGM + RRW  PSS
Sbjct  328  ILEGANQKVPPQVREMATRGGGGMNKFRRWGTPSS  362


 Score =  106 bits (265),  Expect(2) = 1e-88
 Identities = 53/66 (80%), Positives = 59/66 (89%), Gaps = 2/66 (3%)
 Frame = -2

Query  670  YPATWPREVRKIAADLLVNPVQVNIGNIDELVANKSITQYVEVLSPMENHRRLEQILRS-  494
            Y ATWP+EVRKIAADLLVNP QVNIGN+DELVANKSITQ +EVL+PME H RLEQILRS 
Sbjct  149  YTATWPKEVRKIAADLLVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHSRLEQILRSQ  208

Query  493  -PGARI  479
             PG++I
Sbjct  209  EPGSKI  214


>gi|17065030|gb|AAL32669.1| UniGene info RNA helicase, DRH1 [Arabidopsis thaliana]
Length=619

 Score =  237 bits (605),  Expect(2) = 1e-86
 Identities = 124/154 (80%), Positives = 141/154 (91%), Gaps = 1/154 (0%)
 Frame = -3

Query  492  QEPGSKIIIFCSTKKMCDQLARNLSRQFGAAAIHGDKSQADRDYVLSQFRTGRSPVLVAT  313
            QEPGSK+IIFCSTK+MCDQL RNL+RQFGAAAIHGDKSQ +RD VL+QFR+GR+PVLVAT
Sbjct  400  QEPGSKVIIFCSTKRMCDQLTRNLTRQFGAAAIHGDKSQPERDNVLNQFRSGRTPVLVAT  459

Query  312  DVAARGLDIKDIRVVINYDFPTGVEDYVHRIgrtgragatGLAYTFFGDQDSKYASDLIK  133
            DVAARGLD+KDIR V+NYDFP GVEDYVHRIGRTGRAGATG A+TFFGDQDSK+ASDLIK
Sbjct  460  DVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQDSKHASDLIK  519

Query  132  VLEGANQRVPAELRDMASR-GGGMGRPRRWAPSS  34
            +LEGANQRVP ++R+MA+R GGGM +  RW P S
Sbjct  520  ILEGANQRVPPQIREMATRGGGGMNKFSRWGPPS  553


 Score =  103 bits (256),  Expect(2) = 1e-86
 Identities = 50/66 (75%), Positives = 59/66 (89%), Gaps = 2/66 (3%)
 Frame = -2

Query  670  YPATWPREVRKIAADLLVNPVQVNIGNIDELVANKSITQYVEVLSPMENHRRLEQILRS-  494
            Y ATWP+ VRKIAADLLVNP QVNIGN+DELVANKSITQ++EV++PME  RRLEQILRS 
Sbjct  341  YTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQ  400

Query  493  -PGARI  479
             PG+++
Sbjct  401  EPGSKV  406


>gi|18395852|ref|NP_566141.1| UniGene infoGene info DRH1 [Arabidopsis thaliana]
 gi|16226725|gb|AAL16243.1|AF428313_1 UniGene infoGene info AT3g01540/F4P13_9 [Arabidopsis thaliana]
 gi|15215694|gb|AAK91393.1| UniGene infoGene info AT3g01540/F4P13_9 [Arabidopsis thaliana]
 gi|32306509|gb|AAP78938.1| UniGene infoGene info At3g01540 [Arabidopsis thaliana]
Length=618

 Score =  237 bits (605),  Expect(2) = 1e-86
 Identities = 124/154 (80%), Positives = 141/154 (91%), Gaps = 1/154 (0%)
 Frame = -3

Query  492  QEPGSKIIIFCSTKKMCDQLARNLSRQFGAAAIHGDKSQADRDYVLSQFRTGRSPVLVAT  313
            QEPGSK+IIFCSTK+MCDQL RNL+RQFGAAAIHGDKSQ +RD VL+QFR+GR+PVLVAT
Sbjct  400  QEPGSKVIIFCSTKRMCDQLTRNLTRQFGAAAIHGDKSQPERDNVLNQFRSGRTPVLVAT  459

Query  312  DVAARGLDIKDIRVVINYDFPTGVEDYVHRIgrtgragatGLAYTFFGDQDSKYASDLIK  133
            DVAARGLD+KDIR V+NYDFP GVEDYVHRIGRTGRAGATG A+TFFGDQDSK+ASDLIK
Sbjct  460  DVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQDSKHASDLIK  519

Query  132  VLEGANQRVPAELRDMASR-GGGMGRPRRWAPSS  34
            +LEGANQRVP ++R+MA+R GGGM +  RW P S
Sbjct  520  ILEGANQRVPPQIREMATRGGGGMNKFSRWGPPS  553


 Score =  103 bits (256),  Expect(2) = 1e-86
 Identities = 50/66 (75%), Positives = 59/66 (89%), Gaps = 2/66 (3%)
 Frame = -2

Query  670  YPATWPREVRKIAADLLVNPVQVNIGNIDELVANKSITQYVEVLSPMENHRRLEQILRS-  494
            Y ATWP+ VRKIAADLLVNP QVNIGN+DELVANKSITQ++EV++PME  RRLEQILRS 
Sbjct  341  YTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQ  400

Query  493  -PGARI  479
             PG+++
Sbjct  401  EPGSKV  406


>gi|30678365|ref|NP_850492.1| UniGene infoGene info DRH1 [Arabidopsis thaliana]
 gi|42572223|ref|NP_974206.1| UniGene infoGene info DRH1 [Arabidopsis thaliana]
 gi|79295442|ref|NP_001030619.1| UniGene infoGene info DRH1 [Arabidopsis thaliana]
 gi|108861885|sp|Q8H136|RH14_ARATH Gene info DEAD-box ATP-dependent RNA helicase 14
 gi|6016713|gb|AAF01539.1|AC009325_9 Gene info RNA helicase, DRH1 [Arabidopsis thaliana]
 gi|3149952|dbj|BAA28347.1| UniGene infoGene info DRH1 [Arabidopsis thaliana]
Length=619

 Score =  237 bits (605),  Expect(2) = 1e-86
 Identities = 124/154 (80%), Positives = 141/154 (91%), Gaps = 1/154 (0%)
 Frame = -3

Query  492  QEPGSKIIIFCSTKKMCDQLARNLSRQFGAAAIHGDKSQADRDYVLSQFRTGRSPVLVAT  313
            QEPGSK+IIFCSTK+MCDQL RNL+RQFGAAAIHGDKSQ +RD VL+QFR+GR+PVLVAT
Sbjct  400  QEPGSKVIIFCSTKRMCDQLTRNLTRQFGAAAIHGDKSQPERDNVLNQFRSGRTPVLVAT  459

Query  312  DVAARGLDIKDIRVVINYDFPTGVEDYVHRIgrtgragatGLAYTFFGDQDSKYASDLIK  133
            DVAARGLD+KDIR V+NYDFP GVEDYVHRIGRTGRAGATG A+TFFGDQDSK+ASDLIK
Sbjct  460  DVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQDSKHASDLIK  519

Query  132  VLEGANQRVPAELRDMASR-GGGMGRPRRWAPSS  34
            +LEGANQRVP ++R+MA+R GGGM +  RW P S
Sbjct  520  ILEGANQRVPPQIREMATRGGGGMNKFSRWGPPS  553


 Score =  103 bits (256),  Expect(2) = 1e-86
 Identities = 50/66 (75%), Positives = 59/66 (89%), Gaps = 2/66 (3%)
 Frame = -2

Query  670  YPATWPREVRKIAADLLVNPVQVNIGNIDELVANKSITQYVEVLSPMENHRRLEQILRS-  494
            Y ATWP+ VRKIAADLLVNP QVNIGN+DELVANKSITQ++EV++PME  RRLEQILRS 
Sbjct  341  YTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQ  400

Query  493  -PGARI  479
             PG+++
Sbjct  401  EPGSKV  406


>gi|23397305|gb|AAN31934.1| UniGene info putative RNA helicase, DRH1 [Arabidopsis thaliana]
Length=423

 Score =  237 bits (605),  Expect(2) = 1e-86
 Identities = 124/154 (80%), Positives = 141/154 (91%), Gaps = 1/154 (0%)
 Frame = -3

Query  492  QEPGSKIIIFCSTKKMCDQLARNLSRQFGAAAIHGDKSQADRDYVLSQFRTGRSPVLVAT  313
            QEPGSK+IIFCSTK+MCDQL RNL+RQFGAAAIHGDKSQ +RD VL+QFR+GR+PVLVAT
Sbjct  205  QEPGSKVIIFCSTKRMCDQLTRNLTRQFGAAAIHGDKSQPERDNVLNQFRSGRTPVLVAT  264

Query  312  DVAARGLDIKDIRVVINYDFPTGVEDYVHRIgrtgragatGLAYTFFGDQDSKYASDLIK  133
            DVAARGLD+KDIR V+NYDFP GVEDYVHRIGRTGRAGATG A+TFFGDQDSK+ASDLIK
Sbjct  265  DVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQDSKHASDLIK  324

Query  132  VLEGANQRVPAELRDMASR-GGGMGRPRRWAPSS  34
            +LEGANQRVP ++R+MA+R GGGM +  RW P S
Sbjct  325  ILEGANQRVPPQIREMATRGGGGMNKFSRWGPPS  358


 Score =  103 bits (256),  Expect(2) = 1e-86
 Identities = 50/66 (75%), Positives = 59/66 (89%), Gaps = 2/66 (3%)
 Frame = -2

Query  670  YPATWPREVRKIAADLLVNPVQVNIGNIDELVANKSITQYVEVLSPMENHRRLEQILRS-  494
            Y ATWP+ VRKIAADLLVNP QVNIGN+DELVANKSITQ++EV++PME  RRLEQILRS 
Sbjct  146  YTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQ  205

Query  493  -PGARI  479
             PG+++
Sbjct  206  EPGSKV  211


>gi|115434786|ref|NP_001042151.1| Gene info Os01g0172200 [Oryza sativa (japonica cultivar-group)]
 gi|55296347|dbj|BAD68263.1| Gene info putative p68 RNA helicase [Oryza sativa (japonica cultivar-group)]
 gi|113531682|dbj|BAF04065.1| Gene info Os01g0172200 [Oryza sativa (japonica cultivar-group)]
Length=759

 Score =  243 bits (619),  Expect(2) = 2e-86
 Identities = 128/152 (84%), Positives = 141/152 (92%), Gaps = 0/152 (0%)
 Frame = -3

Query  492  QEPGSKIIIFCSTKKMCDQLARNLSRQFGAAAIHGDKSQADRDYVLSQFRTGRSPVLVAT  313
            QEPGSKIIIFCSTK+MCDQLARNL+RQ+GA+AIHGDKSQA+RD VLS+FR+GR P+LVAT
Sbjct  473  QEPGSKIIIFCSTKRMCDQLARNLARQYGASAIHGDKSQAERDSVLSEFRSGRCPILVAT  532

Query  312  DVAARGLDIKDIRVVINYDFPTGVEDYVHRIgrtgragatGLAYTFFGDQDSKYASDLIK  133
            DVAARGLDIKDIRVV+NYDFPTGVEDYVHRIGRTGRAGATG+AYTFF DQDSKYASDL+K
Sbjct  533  DVAARGLDIKDIRVVVNYDFPTGVEDYVHRIGRTGRAGATGVAYTFFCDQDSKYASDLVK  592

Query  132  VLEGANQRVPAELRDMASRGGGMGRPRRWAPS  37
            +LEGANQ V  +LRDM SRGG  GR RRWA S
Sbjct  593  ILEGANQSVSQQLRDMVSRGGYGGRSRRWASS  624


 Score = 97.4 bits (241),  Expect(2) = 2e-86
 Identities = 48/66 (72%), Positives = 58/66 (87%), Gaps = 2/66 (3%)
 Frame = -2

Query  670  YPATWPREVRKIAADLLVNPVQVNIGNIDELVANKSITQYVEVLSPMENHRRLEQILRS-  494
            + ATWP+EVRKIA+DLL NPVQVNIGN D+LVANKSITQYV+V++P E  RRL+QILRS 
Sbjct  414  FTATWPKEVRKIASDLLSNPVQVNIGNTDQLVANKSITQYVDVITPPEKSRRLDQILRSQ  473

Query  493  -PGARI  479
             PG++I
Sbjct  474  EPGSKI  479


>gi|55296348|dbj|BAD68264.1| Gene info putative p68 RNA helicase [Oryza sativa (japonica cultivar-group)]
Length=708

 Score =  243 bits (619),  Expect(2) = 2e-86
 Identities = 128/152 (84%), Positives = 141/152 (92%), Gaps = 0/152 (0%)
 Frame = -3

Query  492  QEPGSKIIIFCSTKKMCDQLARNLSRQFGAAAIHGDKSQADRDYVLSQFRTGRSPVLVAT  313
            QEPGSKIIIFCSTK+MCDQLARNL+RQ+GA+AIHGDKSQA+RD VLS+FR+GR P+LVAT
Sbjct  422  QEPGSKIIIFCSTKRMCDQLARNLARQYGASAIHGDKSQAERDSVLSEFRSGRCPILVAT  481

Query  312  DVAARGLDIKDIRVVINYDFPTGVEDYVHRIgrtgragatGLAYTFFGDQDSKYASDLIK  133
            DVAARGLDIKDIRVV+NYDFPTGVEDYVHRIGRTGRAGATG+AYTFF DQDSKYASDL+K
Sbjct  482  DVAARGLDIKDIRVVVNYDFPTGVEDYVHRIGRTGRAGATGVAYTFFCDQDSKYASDLVK  541

Query  132  VLEGANQRVPAELRDMASRGGGMGRPRRWAPS  37
            +LEGANQ V  +LRDM SRGG  GR RRWA S
Sbjct  542  ILEGANQSVSQQLRDMVSRGGYGGRSRRWASS  573


 Score = 97.4 bits (241),  Expect(2) = 2e-86
 Identities = 48/66 (72%), Positives = 58/66 (87%), Gaps = 2/66 (3%)
 Frame = -2

Query  670  YPATWPREVRKIAADLLVNPVQVNIGNIDELVANKSITQYVEVLSPMENHRRLEQILRS-  494
            + ATWP+EVRKIA+DLL NPVQVNIGN D+LVANKSITQYV+V++P E  RRL+QILRS 
Sbjct  363  FTATWPKEVRKIASDLLSNPVQVNIGNTDQLVANKSITQYVDVITPPEKSRRLDQILRSQ  422

Query  493  -PGARI  479
             PG++I
Sbjct  423  EPGSKI  428


>gi|92894148|gb|ABE92110.1|  WW/Rsp5/WWP; Helicase, C-terminal [Medicago truncatula]
Length=718

 Score =  239 bits (611),  Expect(2) = 4e-85
 Identities = 124/142 (87%), Positives = 140/142 (98%), Gaps = 0/142 (0%)
 Frame = -3

Query  492  QEPGSKIIIFCSTKKMCDQLARNLSRQFGAAAIHGDKSQADRDYVLSQFRTGRSPVLVAT  313
            Q+ GSKIIIFCSTKKMCDQLARNL+RQFGAAAIHGDKSQADRD+VL+QFR+GR+PVLVAT
Sbjct  406  QDQGSKIIIFCSTKKMCDQLARNLTRQFGAAAIHGDKSQADRDHVLNQFRSGRTPVLVAT  465

Query  312  DVAARGLDIKDIRVVINYDFPTGVEDYVHRIgrtgragatGLAYTFFGDQDSKYASDLIK  133
            DVAARGLD+KDIRVV+N+DFPTGVEDYVHRIGRTGRAGATG+AYTFFGDQD+K+ASDLIK
Sbjct  466  DVAARGLDVKDIRVVVNFDFPTGVEDYVHRIGRTGRAGATGIAYTFFGDQDAKHASDLIK  525

Query  132  VLEGANQRVPAELRDMASRGGG  67
            +LEGANQRVP ELR+++SRGGG
Sbjct  526  ILEGANQRVPPELRELSSRGGG  547


 Score = 95.9 bits (237),  Expect(2) = 4e-85
 Identities = 46/59 (77%), Positives = 54/59 (91%), Gaps = 0/59 (0%)
 Frame = -2

Query  670  YPATWPREVRKIAADLLVNPVQVNIGNIDELVANKSITQYVEVLSPMENHRRLEQILRS  494
            + ATWP+EVR+IAADLLVNPVQVNIGN+DELVANKSITQ++EVL+ +E  RRLE ILRS
Sbjct  347  FTATWPKEVRRIAADLLVNPVQVNIGNVDELVANKSITQHIEVLTYVEKQRRLETILRS  405


>gi|6137207|gb|AAF04377.1|AF188678_1  P72 DEAD box protein [Pisum sativum]
Length=716

 Score =  237 bits (604),  Expect(2) = 6e-85
 Identities = 125/150 (83%), Positives = 143/150 (95%), Gaps = 1/150 (0%)
 Frame = -3

Query  492  QEPGSKIIIFCSTKKMCDQLARNLSRQFGAAAIHGDKSQADRDYVLSQFRTGRSPVLVAT  313
            Q+ GSKIIIFCSTKKMCDQLARNL+RQFGAAAI GDKSQADRD+VL+QFR+GR+PVLVAT
Sbjct  394  QDQGSKIIIFCSTKKMCDQLARNLTRQFGAAAIRGDKSQADRDHVLNQFRSGRTPVLVAT  453

Query  312  DVAARGLDIKDIRVVINYDFPTGVEDYVHRIgrtgragatGLAYTFFGDQDSKYASDLIK  133
            DVAARGLD+KDIRVV+NY FPTGVEDY+HRIGRTGRAGATG+AYTFFGDQD+K+ASDLIK
Sbjct  454  DVAARGLDVKDIRVVVNYTFPTGVEDYLHRIGRTGRAGATGIAYTFFGDQDAKHASDLIK  513

Query  132  VLEGANQRVPAELRDMASR-GGGMGRPRRW  46
            +LEGANQ+VP ELR+++SR GGG GR RR+
Sbjct  514  ILEGANQKVPPELRELSSRGGGGFGRSRRY  543


 Score = 97.8 bits (242),  Expect(2) = 6e-85
 Identities = 47/59 (79%), Positives = 54/59 (91%), Gaps = 0/59 (0%)
 Frame = -2

Query  670  YPATWPREVRKIAADLLVNPVQVNIGNIDELVANKSITQYVEVLSPMENHRRLEQILRS  494
            + ATWP+EVRKIAADLLVNPVQVNIGN+DELVANKSITQ++EVL+ ME  RRLE IL+S
Sbjct  335  FTATWPKEVRKIAADLLVNPVQVNIGNVDELVANKSITQHIEVLAHMEKQRRLESILQS  393


>gi|68037499|gb|AAY84883.1| UniGene infoGene info DEAD-box ATPase-RNA-helicase [Triticum aestivum]
Length=381

 Score =  239 bits (611),  Expect(2) = 1e-84
 Identities = 127/154 (82%), Positives = 141/154 (91%), Gaps = 1/154 (0%)
 Frame = -3

Query  492  QEPGSKIIIFCSTKKMCDQLARNLSRQFGAAAIHGDKSQADRDYVLSQFRTGRSPVLVAT  313
            QEPGSK+IIFCSTK+MCDQL+RNLSRQ+GA+AIHGDKSQA+RD VLS+FRTGR P+LVAT
Sbjct  134  QEPGSKVIIFCSTKRMCDQLSRNLSRQYGASAIHGDKSQAERDSVLSEFRTGRCPILVAT  193

Query  312  DVAARGLDIKDIRVVINYDFPTGVEDYVHRIgrtgragatGLAYTFFGDQDSKYASDLIK  133
            DVAARGLD+KDIRVV+NYDFPTGVEDYVHRIGRTGRAGATG+AYTFF DQDSKYASDL+K
Sbjct  194  DVAARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGATGIAYTFFCDQDSKYASDLVK  253

Query  132  VLEGANQRVPAELRDMASRGGGMGR-PRRWAPSS  34
            +LEGANQ V  ELR M  RGG  GR PRRWA S+
Sbjct  254  ILEGANQNVSPELRAMVGRGGYGGRGPRRWASSN  287


 Score = 94.0 bits (232),  Expect(2) = 1e-84
 Identities = 47/66 (71%), Positives = 55/66 (83%), Gaps = 2/66 (3%)
 Frame = -2

Query  670  YPATWPREVRKIAADLLVNPVQVNIGNIDELVANKSITQYVEVLSPMENHRRLEQILR--  497
            + ATWPREVRKIA+DLL NPVQVNIGN DELVANKSITQ+VEV +  E  RRL+QILR  
Sbjct  75   FTATWPREVRKIASDLLTNPVQVNIGNTDELVANKSITQHVEVTTSFEKGRRLDQILRQQ  134

Query  496  SPGARI  479
             PG+++
Sbjct  135  EPGSKV  140


>gi|115437436|ref|NP_001043295.1| Gene info Os01g0549400 [Oryza sativa (japonica cultivar-group)]
 gi|57899403|dbj|BAD88050.1| Gene info putative ATP-dependent RNA helicase DB10 [Oryza sativa (japonica 
cultivar-group)]
 gi|113532826|dbj|BAF05209.1| Gene info Os01g0549400 [Oryza sativa (japonica cultivar-group)]
Length=792

 Score =  233 bits (593),  Expect(2) = 2e-80
 Identities = 124/154 (80%), Positives = 141/154 (91%), Gaps = 1/154 (0%)
 Frame = -3

Query  492  QEPGSKIIIFCSTKKMCDQLARNLSRQFGAAAIHGDKSQADRDYVLSQFRTGRSPVLVAT  313
            Q+ GSK++IFC+TK+MCDQLAR L+RQFGA+AIHGDKSQ++R+ VLS FR+GRSP+LVAT
Sbjct  392  QDSGSKVLIFCTTKRMCDQLARTLTRQFGASAIHGDKSQSEREKVLSHFRSGRSPILVAT  451

Query  312  DVAARGLDIKDIRVVINYDFPTGVEDYVHRIgrtgragatGLAYTFFGDQDSKYASDLIK  133
            DVAARGLDIKDIRVVINYDFPTG+EDYVHRIGRTGRAGATG+AYTFF DQDSKYA+DLIK
Sbjct  452  DVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGVAYTFFCDQDSKYAADLIK  511

Query  132  VLEGANQRVPAELRDMASRGGGMGRPR-RWAPSS  34
            +LEGANQRVP +L DMASRGG  GR R RWA  S
Sbjct  512  ILEGANQRVPRDLADMASRGGRGGRKRNRWATRS  545


 Score = 87.4 bits (215),  Expect(2) = 2e-80
 Identities = 42/59 (71%), Positives = 51/59 (86%), Gaps = 0/59 (0%)
 Frame = -2

Query  670  YPATWPREVRKIAADLLVNPVQVNIGNIDELVANKSITQYVEVLSPMENHRRLEQILRS  494
            Y ATWP+EVR+IA DLLV+PVQV IG++DELVAN +ITQ VE+++P E  RRLEQILRS
Sbjct  333  YTATWPKEVRRIAEDLLVHPVQVTIGSVDELVANSAITQNVELITPSEKLRRLEQILRS  391


>gi|57899404|dbj|BAD88051.1|  putative ATP-dependent RNA helicase DB10 [Oryza sativa (japonica 
cultivar-group)]
Length=583

 Score =  233 bits (593),  Expect(2) = 2e-80
 Identities = 124/154 (80%), Positives = 141/154 (91%), Gaps = 1/154 (0%)
 Frame = -3

Query  492  QEPGSKIIIFCSTKKMCDQLARNLSRQFGAAAIHGDKSQADRDYVLSQFRTGRSPVLVAT  313
            Q+ GSK++IFC+TK+MCDQLAR L+RQFGA+AIHGDKSQ++R+ VLS FR+GRSP+LVAT
Sbjct  183  QDSGSKVLIFCTTKRMCDQLARTLTRQFGASAIHGDKSQSEREKVLSHFRSGRSPILVAT  242

Query  312  DVAARGLDIKDIRVVINYDFPTGVEDYVHRIgrtgragatGLAYTFFGDQDSKYASDLIK  133
            DVAARGLDIKDIRVVINYDFPTG+EDYVHRIGRTGRAGATG+AYTFF DQDSKYA+DLIK
Sbjct  243  DVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGVAYTFFCDQDSKYAADLIK  302

Query  132  VLEGANQRVPAELRDMASRGGGMGRPR-RWAPSS  34
            +LEGANQRVP +L DMASRGG  GR R RWA  S
Sbjct  303  ILEGANQRVPRDLADMASRGGRGGRKRNRWATRS  336


 Score = 87.4 bits (215),  Expect(2) = 2e-80
 Identities = 42/59 (71%), Positives = 51/59 (86%), Gaps = 0/59 (0%)
 Frame = -2

Query  670  YPATWPREVRKIAADLLVNPVQVNIGNIDELVANKSITQYVEVLSPMENHRRLEQILRS  494
            Y ATWP+EVR+IA DLLV+PVQV IG++DELVAN +ITQ VE+++P E  RRLEQILRS
Sbjct  124  YTATWPKEVRRIAEDLLVHPVQVTIGSVDELVANSAITQNVELITPSEKLRRLEQILRS  182


>gi|115486693|ref|NP_001068490.1| Gene info Os11g0689400 [Oryza sativa (japonica cultivar-group)]
 gi|113645712|dbj|BAF28853.1| Gene info Os11g0689400 [Oryza sativa (japonica cultivar-group)]
Length=2841

 Score =  223 bits (568),  Expect(2) = 2e-79
 Identities = 119/150 (79%), Positives = 135/150 (90%), Gaps = 1/150 (0%)
 Frame = -3

Query  492  QEPGSKIIIFCSTKKMCDQLARNLSRQFGAAAIHGDKSQADRDYVLSQFRTGRSPVLVAT  313
            QE GSK+IIFCSTKKMCDQLAR++ R FGAA+IHGDKSQA+RD VL+QFRTGR+P+LVAT
Sbjct  725  QERGSKVIIFCSTKKMCDQLARDIGRSFGAASIHGDKSQAERDNVLNQFRTGRAPILVAT  784

Query  312  DVAARGLDIKDIRVVINYDFPTGVEDYVHRIgrtgragatGLAYTFFGDQDSKYASDLIK  133
            DVAARGLDIKDIRVVINYDFPTG+EDYVHRIGRTGRAGATG++YTFF +QD KYA DL+K
Sbjct  785  DVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGVSYTFFSEQDWKYAGDLVK  844

Query  132  VLEGANQRVPAELRDMASRGGGMGRPRRWA  43
            VLEGANQ VP EL++MA+RG   G PR  A
Sbjct  845  VLEGANQHVPPELQEMAARGAA-GAPRNQA  873


 Score = 93.6 bits (231),  Expect(2) = 2e-79
 Identities = 45/59 (76%), Positives = 52/59 (88%), Gaps = 0/59 (0%)
 Frame = -2

Query  670  YPATWPREVRKIAADLLVNPVQVNIGNIDELVANKSITQYVEVLSPMENHRRLEQILRS  494
            Y ATWP+EV KIA DLL +PVQVNIG+IDELVANKSITQYVEV+ P++  RRLEQILR+
Sbjct  666  YTATWPKEVTKIAGDLLKDPVQVNIGSIDELVANKSITQYVEVVPPLDKQRRLEQILRA  724


>gi|77552592|gb|ABA95389.1|  retrotransposon protein, putative, unclassified, expressed [Oryza 
sativa (japonica cultivar-group)]
Length=1398

 Score =  223 bits (568),  Expect(2) = 2e-79
 Identities = 119/150 (79%), Positives = 135/150 (90%), Gaps = 1/150 (0%)
 Frame = -3

Query  492  QEPGSKIIIFCSTKKMCDQLARNLSRQFGAAAIHGDKSQADRDYVLSQFRTGRSPVLVAT  313
            QE GSK+IIFCSTKKMCDQLAR++ R FGAA+IHGDKSQA+RD VL+QFRTGR+P+LVAT
Sbjct  846  QERGSKVIIFCSTKKMCDQLARDIGRSFGAASIHGDKSQAERDNVLNQFRTGRAPILVAT  905

Query  312  DVAARGLDIKDIRVVINYDFPTGVEDYVHRIgrtgragatGLAYTFFGDQDSKYASDLIK  133
            DVAARGLDIKDIRVVINYDFPTG+EDYVHRIGRTGRAGATG++YTFF +QD KYA DL+K
Sbjct  906  DVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGVSYTFFSEQDWKYAGDLVK  965

Query  132  VLEGANQRVPAELRDMASRGGGMGRPRRWA  43
            VLEGANQ VP EL++MA+RG   G PR  A
Sbjct  966  VLEGANQHVPPELQEMAARGAA-GAPRNQA  994


 Score = 93.6 bits (231),  Expect(2) = 2e-79
 Identities = 45/59 (76%), Positives = 52/59 (88%), Gaps = 0/59 (0%)
 Frame = -2

Query  670  YPATWPREVRKIAADLLVNPVQVNIGNIDELVANKSITQYVEVLSPMENHRRLEQILRS  494
            Y ATWP+EV KIA DLL +PVQVNIG+IDELVANKSITQYVEV+ P++  RRLEQILR+
Sbjct  787  YTATWPKEVTKIAGDLLKDPVQVNIGSIDELVANKSITQYVEVVPPLDKQRRLEQILRA  845


>gi|15230730|ref|NP_187299.1| UniGene infoGene info ATP binding / ATP-dependent helicase/ helicase/ nucleic acid 
binding [Arabidopsis thaliana]
 gi|75313790|sp|Q9SQV1|RH40_ARATH Gene info Probable DEAD-box ATP-dependent RNA helicase 40
 gi|6437557|gb|AAF08584.1|AC011623_17 Gene info putative RNA helicase [Arabidopsis thaliana]
Length=1088

 Score =  213 bits (542),  Expect(2) = 1e-77
 Identities = 112/146 (76%), Positives = 131/146 (89%), Gaps = 0/146 (0%)
 Frame = -3

Query  492  QEPGSKIIIFCSTKKMCDQLARNLSRQFGAAAIHGDKSQADRDYVLSQFRTGRSPVLVAT  313
            QE GSK+IIFCSTK++CD LAR++ R FGA  IHGDK+Q +RD+VL+QFR+G+S VL+AT
Sbjct  677  QERGSKVIIFCSTKRLCDHLARSVGRHFGAVVIHGDKTQGERDWVLNQFRSGKSCVLIAT  736

Query  312  DVAARGLDIKDIRVVINYDFPTGVEDYVHRIgrtgragatGLAYTFFGDQDSKYASDLIK  133
            DVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATG+A+TFF +QD KYA DLIK
Sbjct  737  DVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAFTFFTEQDWKYAPDLIK  796

Query  132  VLEGANQRVPAELRDMASRGGGMGRP  55
            VLEGANQ+VP ++RD+A RGGG G P
Sbjct  797  VLEGANQQVPPQVRDIAMRGGGGGGP  822


 Score = 97.4 bits (241),  Expect(2) = 1e-77
 Identities = 47/59 (79%), Positives = 52/59 (88%), Gaps = 0/59 (0%)
 Frame = -2

Query  670  YPATWPREVRKIAADLLVNPVQVNIGNIDELVANKSITQYVEVLSPMENHRRLEQILRS  494
            Y ATWP+EVRKIA+DLLVNPVQVNIG +DEL ANK+ITQYVEV+  ME  RRLEQILRS
Sbjct  618  YTATWPKEVRKIASDLLVNPVQVNIGRVDELAANKAITQYVEVVPQMEKERRLEQILRS  676


>gi|115435080|ref|NP_001042298.1| Gene info Os01g0197200 [Oryza sativa (japonica cultivar-group)]
 gi|56201870|dbj|BAD73320.1| Gene info putative ethylene-responsive RNA helicase [Oryza sativa (japonica 
cultivar-group)]
 gi|113531829|dbj|BAF04212.1| Gene info Os01g0197200 [Oryza sativa (japonica cultivar-group)]
Length=521

 Score =  148 bits (373),  Expect(2) = 2e-44
 Identities = 82/141 (58%), Positives = 107/141 (75%), Gaps = 2/141 (1%)
 Frame = -3

Query  483  GSKIIIFCSTKKMCDQLARNLSRQ-FGAAAIHGDKSQADRDYVLSQFRTGRSPVLVATDV  307
            GS+I+IF  TKK CDQ+ R L    + A +IHGDKSQA+RD+VLS+F++G+SP++ ATDV
Sbjct  310  GSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDV  369

Query  306  AARGLDIKDIRVVINYDFPTGVEDYVHRIgrtgragatGLAYTFFGDQDSKYASDLIKVL  127
            AARGLD+KD++ VINYDFP  +EDYVHRIGRTGRAGA G AYTFF   ++++A DLI +L
Sbjct  370  AARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKDLINIL  429

Query  126  EGANQRVPA-ELRDMASRGGG  67
            E A Q+    ++  M   G G
Sbjct  430  EEAGQKATVIDIEGMEVAGHG  450


 Score = 51.6 bits (122),  Expect(2) = 2e-44
 Identities = 27/66 (40%), Positives = 45/66 (68%), Gaps = 3/66 (4%)
 Frame = -2

Query  670  YPATWPREVRKIAADLLVNPVQVNIGNIDELVANKSITQYVEVLSPMENHRRLEQILRS-  494
            + ATWP+EV ++A + L +P +V IG+ +EL AN +I+Q+VE+LS  + + +L  +L   
Sbjct  249  WSATWPKEVEQLARNFLFDPYKVIIGS-EELKANHAISQHVEILSESQKYNKLVNLLEDI  307

Query  493  -PGARI  479
              G+RI
Sbjct  308  MDGSRI  313


>gi|42573778|ref|NP_974985.1| UniGene infoGene info ATP binding / ATP-dependent helicase/ helicase/ nucleic acid 
binding [Arabidopsis thaliana]
 gi|108861888|sp|Q8W4R3|RH30_ARATH Gene info DEAD-box ATP-dependent RNA helicase 30
 gi|110741550|dbj|BAE98724.1| Gene info ATP-dependent RNA helicase-like protein [Arabidopsis thaliana]
Length=591

 Score =  152 bits (384),  Expect(2) = 3e-44
 Identities = 85/153 (55%), Positives = 114/153 (74%), Gaps = 5/153 (3%)
 Frame = -3

Query  483  GSKIIIFCSTKKMCDQLARNLSRQ-FGAAAIHGDKSQADRDYVLSQFRTGRSPVLVATDV  307
            GSKI+IF  TK+ CDQ+ R L    + A AIHGDK+Q++RD VL++F++GRSP++ ATDV
Sbjct  410  GSKILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDV  469

Query  306  AARGLDIKDIRVVINYDFPTGVEDYVHRIgrtgragatGLAYTFFGDQDSKYASDLIKVL  127
            AARGLD+KDI+ V+NYDFP  +EDY+HRIGRTGRAGA G+A+TFF   ++K+A +L+K+L
Sbjct  470  AARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFARELVKIL  529

Query  126  EGANQRVP----AELRDMASRGGGMGRPRRWAP  40
            + A Q VP    A +R   S  GG G  R + P
Sbjct  530  QEAGQVVPPTLSALVRSSGSGYGGSGGGRNFRP  562


 Score = 46.6 bits (109),  Expect(2) = 3e-44
 Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
 Frame = -2

Query  670  YPATWPREVRKIAADLLVNPVQVNIGNIDELVANKSITQYVEVLSPMENHRRLEQILR  497
            + ATWPREV  +A   L +P +  IG+ D L AN+SI Q +E++   E + RL  +L+
Sbjct  349  WSATWPREVETLARQFLRDPYKAIIGSTD-LKANQSINQVIEIVPTPEKYNRLLTLLK  405


>gi|10177293|dbj|BAB10554.1|  ATP-dependent RNA helicase-like protein [Arabidopsis thaliana]
Length=564

 Score =  152 bits (384),  Expect(2) = 3e-44
 Identities = 85/153 (55%), Positives = 114/153 (74%), Gaps = 5/153 (3%)
 Frame = -3

Query  483  GSKIIIFCSTKKMCDQLARNLSRQ-FGAAAIHGDKSQADRDYVLSQFRTGRSPVLVATDV  307
            GSKI+IF  TK+ CDQ+ R L    + A AIHGDK+Q++RD VL++F++GRSP++ ATDV
Sbjct  383  GSKILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDV  442

Query  306  AARGLDIKDIRVVINYDFPTGVEDYVHRIgrtgragatGLAYTFFGDQDSKYASDLIKVL  127
            AARGLD+KDI+ V+NYDFP  +EDY+HRIGRTGRAGA G+A+TFF   ++K+A +L+K+L
Sbjct  443  AARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFARELVKIL  502

Query  126  EGANQRVP----AELRDMASRGGGMGRPRRWAP  40
            + A Q VP    A +R   S  GG G  R + P
Sbjct  503  QEAGQVVPPTLSALVRSSGSGYGGSGGGRNFRP  535


 Score = 46.6 bits (109),  Expect(2) = 3e-44
 Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
 Frame = -2

Query  670  YPATWPREVRKIAADLLVNPVQVNIGNIDELVANKSITQYVEVLSPMENHRRLEQILR  497
            + ATWPREV  +A   L +P +  IG+ D L AN+SI Q +E++   E + RL  +L+
Sbjct  322  WSATWPREVETLARQFLRDPYKAIIGSTD-LKANQSINQVIEIVPTPEKYNRLLTLLK  378


>gi|15221998|ref|NP_175911.1| UniGene infoGene info ATP binding / ATP-dependent helicase/ helicase/ nucleic acid 
binding [Arabidopsis thaliana]
 gi|75333448|sp|Q9C718|RH20_ARATH Gene info DEAD-box ATP-dependent RNA helicase 20
 gi|12321578|gb|AAG50841.1|AC073944_8 Gene info ethylene-responsive RNA helicase, putative [Arabidopsis thaliana]
 gi|17065338|gb|AAL32823.1| UniGene infoGene info Unknown protein [Arabidopsis thaliana]
 gi|22136216|gb|AAM91186.1| UniGene infoGene info unknown protein [Arabidopsis thaliana]
Length=501

 Score =  149 bits (376),  Expect(2) = 7e-44
 Identities = 80/134 (59%), Positives = 105/134 (78%), Gaps = 1/134 (0%)
 Frame = -3

Query  483  GSKIIIFCSTKKMCDQLARNLSRQ-FGAAAIHGDKSQADRDYVLSQFRTGRSPVLVATDV  307
            GS+I++F  TKK CDQ+ R L    + A +IHGDKSQA+RD+VLS+FR+G+SP++ ATDV
Sbjct  344  GSRILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDV  403

Query  306  AARGLDIKDIRVVINYDFPTGVEDYVHRIgrtgragatGLAYTFFGDQDSKYASDLIKVL  127
            AARGLD+KD++ VINYDFP  +EDYVHRIGRTGRAGA G AYTFF   ++++A +L  +L
Sbjct  404  AARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTVANARFAKELTNIL  463

Query  126  EGANQRVPAELRDM  85
            + A Q+V  EL  M
Sbjct  464  QEAGQKVSPELASM  477


 Score = 48.5 bits (114),  Expect(2) = 7e-44
 Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 3/66 (4%)
 Frame = -2

Query  670  YPATWPREVRKIAADLLVNPVQVNIGNIDELVANKSITQYVEVLSPMENHRRLEQILRS-  494
            + ATWP+EV +++   L NP +V IG+ D L AN++I Q V+V+S  + + +L ++L   
Sbjct  283  WSATWPKEVEQLSKKFLYNPYKVIIGSSD-LKANRAIRQIVDVISESQKYNKLVKLLEDI  341

Query  493  -PGARI  479
              G+RI
Sbjct  342  MDGSRI  347


>gi|39653663|gb|AAR29370.1| UniGene infoGene info DEAD box RNA helicase [Zea mays]
Length=566

 Score =  150 bits (378),  Expect(2) = 1e-43
 Identities = 86/161 (53%), Positives = 117/161 (72%), Gaps = 5/161 (3%)
 Frame = -3

Query  519  EDWSKYCAPQEPGSKIIIFCSTKKMCDQLARNLSRQ-FGAAAIHGDKSQADRDYVLSQFR  343
            +D  K  +    GS+I+IF  TKK CD++ R L    + A +IHGDK+QA+RDYVL++F+
Sbjct  383  QDSVKLLSDLMDGSRILIFLQTKKDCDKITRQLRMDGWPALSIHGDKAQAERDYVLAEFK  442

Query  342  TGRSPVLVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIgrtgragatGLAYTFFGDQ  163
            +G+SP++ ATDVAARGLD+KDI+ VINYDFPT +EDY+HRIGRTGRAGA+G A+TFF   
Sbjct  443  SGKSPIMAATDVAARGLDVKDIKCVINYDFPTTLEDYIHRIGRTGRAGASGTAFTFFTHA  502

Query  162  DSKYASDLIKVLEGANQRVPAELRDMA----SRGGGMGRPR  52
            ++K++ +L+K+L  A Q V   L  M+    S GGG  R R
Sbjct  503  NAKFSRNLVKILREAGQVVNPALESMSRSSNSTGGGNFRSR  543


 Score = 46.6 bits (109),  Expect(2) = 1e-43
 Identities = 26/49 (53%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
 Frame = -2

Query  670  YPATWPREVRKIAADLLVNPVQVNIGNIDELVANKSITQYVEVLSPMEN  524
            + ATWPREV  +A   L NP +V IG+  EL AN SI Q VEV+S  E+
Sbjct  334  WSATWPREVEALARQFLQNPYKVIIGS-PELKANHSIQQIVEVISDHES  381


>gi|3776029|emb|CAA09215.1| UniGene info RNA helicase [Arabidopsis thaliana]
Length=263

 Score =  128 bits (321),  Expect(2) = 5e-37
 Identities = 68/105 (64%), Positives = 88/105 (83%), Gaps = 1/105 (0%)
 Frame = -3

Query  483  GSKIIIFCSTKKMCDQLARNLSRQ-FGAAAIHGDKSQADRDYVLSQFRTGRSPVLVATDV  307
            GSKI+IF  TK+ CDQ+ R L    + A AIHGDK+Q++RD VL++F++GRSP++ ATDV
Sbjct  154  GSKILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDV  213

Query  306  AARGLDIKDIRVVINYDFPTGVEDYVHRIgrtgragatGLAYTFF  172
            AARGLD+KDI+ V+NYDFP  +EDY+HRIGRTGRAGA G+A+TFF
Sbjct  214  AARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFF  258


 Score = 46.6 bits (109),  Expect(2) = 5e-37
 Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
 Frame = -2

Query  670  YPATWPREVRKIAADLLVNPVQVNIGNIDELVANKSITQYVEVLSPMENHRRLEQILR  497
            + ATWPREV  +A   L +P +  IG+ D L AN+SI Q +E++   E + RL  +L+
Sbjct  93   WSATWPREVETLARQFLRDPYKAIIGSTD-LKANQSINQVIEIVPTPEKYNRLLTLLK  149


>gi|116059913|emb|CAL55972.1|  DEAD-box protein abstrakt (ISS) [Ostreococcus tauri]
Length=734

 Score =  120 bits (302),  Expect(2) = 7e-37
 Identities = 73/138 (52%), Positives = 90/138 (65%), Gaps = 0/138 (0%)
 Frame = -3

Query  507  KYCAPQEPGSKIIIFCSTKKMCDQLARNLSRQFGAAAIHGDKSQADRDYVLSQFRTGRSP  328
            +Y    +   + +IF   KK C  L + LSR++ A  IHGD SQADR+  +  F+ G S 
Sbjct  563  QYLGSPKDCPRTLIFGLYKKECANLHQRLSREWPAVCIHGDMSQADRERSVEAFKKGTSR  622

Query  327  VLVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIgrtgragatGLAYTFFGDQDSKYA  148
            +L+ATDVAARGLDIK +  VINY FP   EDYVHRIGRTGRAGATGLA+TFF   D   A
Sbjct  623  ILIATDVAARGLDIKGVEYVINYTFPLTTEDYVHRIGRTGRAGATGLAHTFFTQHDKARA  682

Query  147  SDLIKVLEGANQRVPAEL  94
             +L+ VL  A   VP +L
Sbjct  683  GELVNVLRKAGAEVPEDL  700


 Score = 53.5 bits (127),  Expect(2) = 7e-37
 Identities = 24/58 (41%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
 Frame = -2

Query  670  YPATWPREVRKIAADLLVNPVQVNIGNIDELVANKSITQYVEVLSPMENHRRLEQILR  497
            + ATWP  V+ +A++ + NPV+V IG+ + L A++SITQ VEV+ P +  R L ++++
Sbjct  506  FSATWPMSVQSLASEFMCNPVRVRIGS-EGLKASQSITQIVEVVEPQDKDRHLARVMK  562


>gi|116055884|emb|CAL57969.1|  DEAD-box protein abstrakt (ISS) [Ostreococcus tauri]
Length=1118

 Score =  122 bits (305),  Expect(2) = 6e-36
 Identities = 75/132 (56%), Positives = 91/132 (68%), Gaps = 4/132 (3%)
 Frame = -3

Query  471  IIFCSTKKMCDQLARNLSRQFG---AAAIHGDKSQADRDYVLSQFRTGRSPVLVATDVAA  301
            I+F  TK+ CD L R L +Q G   A +IHGDK Q +R+ VL  FR GR  +LVATDVAA
Sbjct  356  IMFAGTKRRCDFLDRRL-KQVGFSSAGSIHGDKDQYEREMVLDNFRRGRGNILVATDVAA  414

Query  300  RGLDIKDIRVVINYDFPTGVEDYVHRIgrtgragatGLAYTFFGDQDSKYASDLIKVLEG  121
            RGLDI  +  VI YDFP  VEDYVHRIGRTGRAG  G A+TFF   +   A++LI++L+G
Sbjct  415  RGLDIPGVAAVIVYDFPLQVEDYVHRIGRTGRAGKDGKAFTFFTKDNRGAANELIEILQG  474

Query  120  ANQRVPAELRDM  85
            A Q VP  L+ M
Sbjct  475  AGQTVPLALQAM  486


 Score = 49.3 bits (116),  Expect(2) = 6e-36
 Identities = 27/59 (45%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
 Frame = -2

Query  670  YPATWPREVRKIAADLLVNPVQVNIGN-IDELVANKSITQYVEVLSPMENHRRLEQILR  497
            + ATWP+ V+KIA      P+ + IG+  D+L ANKSITQ VEV+   E   R   IL+
Sbjct  288  FTATWPKGVQKIADAFTTKPIHIQIGSGGDKLTANKSITQTVEVVEEEEKFDRCVAILK  346


>gi|3776013|emb|CAA09209.1| UniGene info RNA helicase [Arabidopsis thaliana]
Length=187

 Score =  149 bits (376),  Expect = 9e-36
 Identities = 80/134 (59%), Positives = 105/134 (78%), Gaps = 1/134 (0%)
 Frame = -3

Query  483  GSKIIIFCSTKKMCDQLARNLSRQ-FGAAAIHGDKSQADRDYVLSQFRTGRSPVLVATDV  307
            GS+I++F  TKK CDQ+ R L    + A +IHGDKSQA+RD+VLS+FR+G+SP++ ATDV
Sbjct  30   GSRILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDV  89

Query  306  AARGLDIKDIRVVINYDFPTGVEDYVHRIgrtgragatGLAYTFFGDQDSKYASDLIKVL  127
            AARGLD+KD++ VINYDFP  +EDYVHRIGRTGRAGA G AYTFF   ++++A +L  +L
Sbjct  90   AARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTVANARFAKELTNIL  149

Query  126  EGANQRVPAELRDM  85
            + A Q+V  EL  M
Sbjct  150  QEAGQKVSPELASM  163


>gi|56784388|dbj|BAD82427.1|  putative DEAD box RNA helicase [Oryza sativa (japonica cultivar-group)]
 gi|56785381|dbj|BAD82339.1|  putative DEAD box RNA helicase [Oryza sativa (japonica cultivar-group)]
Length=571

 Score =  148 bits (374),  Expect = 2e-35
 Identities = 82/151 (54%), Positives = 112/151 (74%), Gaps = 1/151 (0%)
 Frame = -3

Query  510  SKYCAPQEPGSKIIIFCSTKKMCDQLARNLSRQ-FGAAAIHGDKSQADRDYVLSQFRTGR  334
            SK  +    GS+I+IF  TKK CD++ R L    + A +IHGDK+QA+RDYVL++F++G+
Sbjct  392  SKLLSDLMDGSRILIFFQTKKDCDKVTRQLRMDGWPALSIHGDKAQAERDYVLAEFKSGK  451

Query  333  SPVLVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIgrtgragatGLAYTFFGDQDSK  154
            SP++ ATDVAARGLD+KDI+ VIN+DFPT +EDY+HRIGRTGRAGA+G A+TFF   ++K
Sbjct  452  SPIMAATDVAARGLDVKDIKCVINFDFPTTLEDYIHRIGRTGRAGASGTAFTFFTLSNAK  511

Query  153  YASDLIKVLEGANQRVPAELRDMASRGGGMG  61
            ++ +L+K+L  A Q V   L  MA     MG
Sbjct  512  FSRNLVKILREAGQVVNPALESMAKSASSMG  542


 Score = 52.8 bits (125),  Expect = 1e-06
 Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
 Frame = -2

Query  670  YPATWPREVRKIAADLLVNPVQVNIGNIDELVANKSITQYVEVLSPMENHRRLEQILRS-  494
            + ATWPREV  +A   L NP +V IG+ D L AN SI Q +EV+S  E + RL ++L   
Sbjct  340  WSATWPREVESLARQFLQNPYKVIIGSPD-LKANHSIQQIIEVISEHEKYPRLSKLLSDL  398

Query  493  -PGARIQDYY  467
              G+RI  ++
Sbjct  399  MDGSRILIFF  408


>gi|5669638|gb|AAD46404.1|AF096248_1 UniGene infoGene info ethylene-responsive RNA helicase [Lycopersicon esculentum]
Length=474

 Score =  147 bits (371),  Expect = 3e-35
 Identities = 86/161 (53%), Positives = 113/161 (70%), Gaps = 15/161 (9%)
 Frame = -3

Query  483  GSKIIIFCSTKKMCDQLARNLSRQ-FGAAAIHGDKSQADRDYVLSQFRTGRSPVLVATDV  307
            GS+I+IF  T K CDQ+ R L    + A +IHGDKSQA+RD+VLS+F+ G+SP++ ATDV
Sbjct  315  GSRILIF-RTLKGCDQVTRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDV  373

Query  306  AARGLDIKDIRVVINYDFPTGVEDYVHRIgrtgragatGLAYTFFGDQDSKYASDLIKVL  127
            AARGLD+KD++ VINYDFP  +EDYVHRIGRTGRAGA+G AYTFF   ++++A DL+ +L
Sbjct  374  AARGLDVKDVKFVINYDFPGSLEDYVHRIGRTGRAGASGTAYTFFTAANARFAKDLVNIL  433

Query  126  EGANQRVPAELRDMA-------------SRGGGMGRPRRWA  43
            E A Q+V  EL  M               RG G G  ++W+
Sbjct  434  EEAGQKVSPELAKMGRGAPPPPGHGGFRDRGRGYGGNKQWS  474


>gi|12323177|gb|AAG51573.1|AC027034_19  RNA helicase, 5' partial; 101954-101280 [Arabidopsis thaliana]
Length=155

 Score =  144 bits (364),  Expect = 2e-34
 Identities = 78/131 (59%), Positives = 102/131 (77%), Gaps = 1/131 (0%)
 Frame = -3

Query  474  IIIFCSTKKMCDQLARNLSRQ-FGAAAIHGDKSQADRDYVLSQFRTGRSPVLVATDVAAR  298
            I++F  TKK CDQ+ R L    + A +IHGDKSQA+RD+VLS+FR+G+SP++ ATDVAAR
Sbjct  1    ILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAAR  60

Query  297  GLDIKDIRVVINYDFPTGVEDYVHRIgrtgragatGLAYTFFGDQDSKYASDLIKVLEGA  118
            GLD+KD++ VINYDFP  +EDYVHRIGRTGRAGA G AYTFF   ++++A +L  +L+ A
Sbjct  61   GLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTVANARFAKELTNILQEA  120

Query  117  NQRVPAELRDM  85
             Q+V  EL  M
Sbjct  121  GQKVSPELASM  131


>gi|116061203|emb|CAL56591.1|  ATP-dependent RNA helicase (ISS) [Ostreococcus tauri]
Length=682

 Score =  123 bits (309),  Expect(2) = 5e-33
 Identities = 68/138 (49%), Positives = 98/138 (71%), Gaps = 3/138 (2%)
 Frame = -3

Query  483  GSKIIIFCSTKKMCDQLARNLS-RQFGAAAIHGDKSQADRDYVLSQFRTGRSPVLVATDV  307
            G ++++F  TK   D L R L    + A  +HGDK Q +RD+VLS+F++G SP+++ATDV
Sbjct  311  GERLLVFVETKASVDALTRKLRVGGWPALGLHGDKEQKERDWVLSEFKSGSSPIMIATDV  370

Query  306  AARGLDIKDIRVVINYDFPT--GVEDYVHRIgrtgragatGLAYTFFGDQDSKYASDLIK  133
            A+RGLD++ +++V+NYDFP   GVE+YVHRIGRTGRAG  G + TFF  +D ++A  L+ 
Sbjct  371  ASRGLDVEGVKLVVNYDFPNRGGVEEYVHRIGRTGRAGRLGKSVTFFTIRDGRHARGLVD  430

Query  132  VLEGANQRVPAELRDMAS  79
            VL  + QRVP  L + A+
Sbjct  431  VLRSSGQRVPDALANAAA  448


 Score = 37.7 bits (86),  Expect(2) = 5e-33
 Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
 Frame = -2

Query  670  YPATWPREVRKIAADLL-VNPVQVNI-GNIDELVANKSITQYVEVLSPMENHR  518
            + ATWP EVR+IA  L+  NPV+  + G  D L+A+K++ Q V V++  E  +
Sbjct  245  FTATWPVEVREIARTLVRNNPVEFRVSGAGDSLLASKNVEQIVHVMNGDEEDK  297


>gi|115474897|ref|NP_001061045.1| Gene info Os08g0159900 [Oryza sativa (japonica cultivar-group)]
 gi|29467560|dbj|BAC66730.1| Gene info putative RNA helicase [Oryza sativa (japonica cultivar-group)]
 gi|37806159|dbj|BAC99664.1| Gene info putative RNA helicase [Oryza sativa (japonica cultivar-group)]
 gi|113623014|dbj|BAF22959.1| Gene info Os08g0159900 [Oryza sativa (japonica cultivar-group)]
Length=1049

 Score =  116 bits (291),  Expect(2) = 5e-32
 Identities = 61/135 (45%), Positives = 92/135 (68%), Gaps = 1/135 (0%)
 Frame = -3

Query  477  KIIIFCSTKKMCDQLARNLSRQ-FGAAAIHGDKSQADRDYVLSQFRTGRSPVLVATDVAA  301
            KI++F  ++  CD L ++L +  +   ++HG K Q DR+  L+ F++    +L+AT VAA
Sbjct  673  KILVFVHSQDKCDSLLKDLFQHGYPCLSLHGGKDQTDRESTLADFKSNVCSLLIATSVAA  732

Query  300  RGLDIKDIRVVINYDFPTGVEDYVHRIgrtgragatGLAYTFFGDQDSKYASDLIKVLEG  121
            RGLD+K++ +V+NYD P   EDYVHR+GRTGRAG  G A TF  +++ +YA DL+K LE 
Sbjct  733  RGLDVKELELVVNYDVPNHYEDYVHRVGRTGRAGRKGFAVTFISEEEERYAPDLVKALEL  792

Query  120  ANQRVPAELRDMASR  76
            + Q VP +L+ +A R
Sbjct  793  SEQAVPEDLKGLADR  807


 Score = 41.6 bits (96),  Expect(2) = 5e-32
 Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
 Frame = -2

Query  670  YPATWPREVRKIAADLLVNPVQVNIGNIDELVANKSITQYVEVLSPMENHRRLEQIL  500
            + AT+PR+V  +A  +L  PV++ +G     V NK ITQ VEV    E   RL ++L
Sbjct  611  FSATFPRQVEILARKVLTKPVEIQVGG--RSVVNKDITQLVEVRPENERFFRLLELL  665


>gi|15231074|ref|NP_191416.1| UniGene infoGene info ATP binding / ATP-dependent helicase/ helicase/ nucleic acid 
binding [Arabidopsis thaliana]
 gi|75335836|sp|Q9M2F9|RH52_ARATH Gene info DEAD-box ATP-dependent RNA helicase 52
 gi|6735374|emb|CAB68195.1| Gene info ATP-dependent RNA helicase-like protein [Arabidopsis thaliana]
 gi|15146288|gb|AAK83627.1| UniGene infoGene info AT3g58570/F14P22_160 [Arabidopsis thaliana]
 gi|21593710|gb|AAM65677.1| UniGene infoGene info ATP-dependent RNA helicase-like protein [Arabidopsis thaliana]
 gi|27363456|gb|AAO11647.1| UniGene infoGene info At3g58570/F14P22_160 [Arabidopsis thaliana]
Length=646

 Score =  120 bits (301),  Expect(2) = 2e-30
 Identities = 73/142 (51%), Positives = 93/142 (65%), Gaps = 4/142 (2%)
 Frame = -3

Query  471  IIFCSTKKMCDQLARNLS-RQFGAAAIHGDKSQADRDYVLSQFRTGRSPVLVATDVAARG  295
            ++F  TKK  D L   L    F A  IHGD+SQ +R+  L  F+TGR+P+LVATDVAARG
Sbjct  409  LVFVETKKGADSLENWLCINGFPATTIHGDRSQQEREVALRSFKTGRTPILVATDVAARG  468

Query  294  LDIKDIRVVINYDFPTGVEDYVHRIgrtgragatGLAYTFFGDQDSKYASDLIKVLEGAN  115
            LDI  +  V+N+D P  ++DYVHRIGRTGRAG +GLA  FF D ++  A  L ++++ AN
Sbjct  469  LDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGNSGLATAFFNDNNTTMAKPLAELMQEAN  528

Query  114  QRVPAELRDMASR---GGGMGR  58
            Q VP  L   ASR   GGG  R
Sbjct  529  QEVPDWLTRYASRASFGGGKNR  550


 Score = 32.0 bits (71),  Expect(2) = 2e-30
 Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
 Frame = -2

Query  670  YPATWPREVRKIAADLLVNPVQVNIGNIDELVANKSITQYVEVLSPMENHRRLEQILRS  494
            + AT+PRE++++A+D L N + + +G +    +   I Q VE +   +    L  +L +
Sbjct  339  FSATFPREIQRLASDFLSNYIFLAVGRVGS--STDLIVQRVEFVHDSDKRSHLMDLLHA  395


>gi|18410973|ref|NP_567067.1| UniGene infoGene info ATP binding / ATP-dependent helicase/ helicase/ nucleic acid 
binding [Arabidopsis thaliana]
 gi|42572719|ref|NP_974455.1| UniGene infoGene info ATP binding / ATP-dependent helicase/ helicase/ nucleic acid 
binding [Arabidopsis thaliana]
 gi|79315530|ref|NP_001030884.1| UniGene infoGene info ATP binding / ATP-dependent helicase/ helicase/ nucleic acid 
binding [Arabidopsis thaliana]
 gi|75329861|sp|Q8LA13|RH11_ARATH Gene info DEAD-box ATP-dependent RNA helicase 11
 gi|21593670|gb|AAM65637.1| UniGene infoGene info ATP-dependent RNA helicase-like protein [Arabidopsis thaliana]
Length=612

 Score =  119 bits (299),  Expect(2) = 7e-30
 Identities = 71/149 (47%), Positives = 99/149 (66%), Gaps = 4/149 (2%)
 Frame = -3

Query  492  QEPGSKIIIFCSTKKMCDQLARNLS-RQFGAAAIHGDKSQADRDYVLSQFRTGRSPVLVA  316
            Q+  S  ++F  TK+  D L   L   +F A +IHGD++Q +R+  L  F+TGR+P+LVA
Sbjct  405  QDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTGRTPILVA  464

Query  315  TDVAARGLDIKDIRVVINYDFPTGVEDYVHRIgrtgragatGLAYTFFGDQDSKYASDLI  136
            TDVAARGLDI  +  V+N+D P  ++DYVHRIGRTGRAG +G+A  FF + +++ A  L 
Sbjct  465  TDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIATAFFNENNAQLARSLA  524

Query  135  KVLEGANQRVPAELRDMASR---GGGMGR  58
            ++++ ANQ VP  L   ASR   GGG  R
Sbjct  525  ELMQEANQEVPEWLTRYASRASFGGGKKR  553


 Score = 31.2 bits (69),  Expect(2) = 7e-30
 Identities = 15/59 (25%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
 Frame = -2

Query  670  YPATWPREVRKIAADLLVNPVQVNIGNIDELVANKSITQYVEVLSPMENHRRLEQILRS  494
            + AT+P +++++AAD + N + + +G +    +   ITQ VE +   +    L  +L +
Sbjct  344  FSATFPSQIQRLAADFMSNYIFLAVGRVGS--STDLITQRVEFVQESDKRSHLMDLLHA  400


>gi|17064740|gb|AAL32524.1| UniGene info ATP-dependent RNA helicase-like protein [Arabidopsis thaliana]
 gi|21387105|gb|AAM47956.1| UniGene info ATP-dependent RNA helicase-like protein [Arabidopsis thaliana]
Length=421

 Score =  119 bits (299),  Expect(2) = 7e-30
 Identities = 71/149 (47%), Positives = 99/149 (66%), Gaps = 4/149 (2%)
 Frame = -3

Query  492  QEPGSKIIIFCSTKKMCDQLARNLS-RQFGAAAIHGDKSQADRDYVLSQFRTGRSPVLVA  316
            Q+  S  ++F  TK+  D L   L   +F A +IHGD++Q +R+  L  F+TGR+P+LVA
Sbjct  214  QDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTGRTPILVA  273

Query  315  TDVAARGLDIKDIRVVINYDFPTGVEDYVHRIgrtgragatGLAYTFFGDQDSKYASDLI  136
            TDVAARGLDI  +  V+N+D P  ++DYVHRIGRTGRAG +G+A  FF + +++ A  L 
Sbjct  274  TDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIATAFFNENNAQLARSLA  333

Query  135  KVLEGANQRVPAELRDMASR---GGGMGR  58
            ++++ ANQ VP  L   ASR   GGG  R
Sbjct  334  ELMQEANQEVPEWLTRYASRASFGGGKKR  362


 Score = 31.2 bits (69),  Expect(2) = 7e-30
 Identities = 15/59 (25%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
 Frame = -2

Query  670  YPATWPREVRKIAADLLVNPVQVNIGNIDELVANKSITQYVEVLSPMENHRRLEQILRS  494
            + AT+P +++++AAD + N + + +G +    +   ITQ VE +   +    L  +L +
Sbjct  153  FSATFPSQIQRLAADFMSNYIFLAVGRVGS--STDLITQRVEFVQESDKRSHLMDLLHA  209


>gi|15227951|ref|NP_181780.1| UniGene infoGene info ATP binding / ATP-dependent helicase/ helicase/ nucleic acid 
binding [Arabidopsis thaliana]
 gi|108861890|sp|Q84W89|RH37_ARATH Gene info DEAD-box ATP-dependent RNA helicase 37
 gi|4559339|gb|AAD23001.1| Gene info putative ATP-dependent RNA helicase [Arabidopsis thaliana]
Length=633

 Score =  116 bits (291),  Expect(2) = 1e-29
 Identities = 70/142 (49%), Positives = 94/142 (66%), Gaps = 4/142 (2%)
 Frame = -3

Query  471  IIFCSTKKMCDQLARNLS-RQFGAAAIHGDKSQADRDYVLSQFRTGRSPVLVATDVAARG  295
            ++F  TK+  D L   L    F A +IHGD++Q +R+  L  F++GR+P+LVATDVAARG
Sbjct  422  LVFVETKRGADSLENWLCINGFPATSIHGDRTQQEREVALKAFKSGRTPILVATDVAARG  481

Query  294  LDIKDIRVVINYDFPTGVEDYVHRIgrtgragatGLAYTFFGDQDSKYASDLIKVLEGAN  115
            LDI  +  V+N+D P  ++DYVHRIGRTGRAG +GLA  FF D ++  A  L ++++ AN
Sbjct  482  LDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNDGNTSLARPLAELMQEAN  541

Query  114  QRVPAELRDMASR---GGGMGR  58
            Q VP  L   ASR   GGG  R
Sbjct  542  QEVPEWLTRYASRSSFGGGKNR  563


 Score = 33.5 bits (75),  Expect(2) = 1e-29
 Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
 Frame = -2

Query  670  YPATWPREVRKIAADLLVNPVQVNIGNIDELVANKSITQYVEVLSPMENHRRLEQILRS  494
            + AT+PRE++++AAD L N + + +G +    +   I Q VE +   +    L  +L +
Sbjct  352  FSATFPREIQRLAADFLANYIFLAVGRVGS--STDLIVQRVEFVLDSDKRSHLMDLLHA  408


>gi|28393424|gb|AAO42134.1| UniGene info putative DEAD/DEAH box RNA helicase [Arabidopsis thaliana]
Length=633

 Score =  116 bits (291),  Expect(2) = 1e-29
 Identities = 70/142 (49%), Positives = 94/142 (66%), Gaps = 4/142 (2%)
 Frame = -3

Query  471  IIFCSTKKMCDQLARNLS-RQFGAAAIHGDKSQADRDYVLSQFRTGRSPVLVATDVAARG  295
            ++F  TK+  D L   L    F A +IHGD++Q +R+  L  F++GR+P+LVATDVAARG
Sbjct  422  LVFVETKRGADSLENWLCINGFPATSIHGDRTQQEREVALKAFKSGRTPILVATDVAARG  481

Query  294  LDIKDIRVVINYDFPTGVEDYVHRIgrtgragatGLAYTFFGDQDSKYASDLIKVLEGAN  115
            LDI  +  V+N+D P  ++DYVHRIGRTGRAG +GLA  FF D ++  A  L ++++ AN
Sbjct  482  LDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNDGNTSLARPLAELMQEAN  541

Query  114  QRVPAELRDMASR---GGGMGR  58
            Q VP  L   ASR   GGG  R
Sbjct  542  QEVPEWLTRYASRSSFGGGKNR  563


 Score = 33.5 bits (75),  Expect(2) = 1e-29
 Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
 Frame = -2

Query  670  YPATWPREVRKIAADLLVNPVQVNIGNIDELVANKSITQYVEVLSPMENHRRLEQILRS  494
            + AT+PRE++++AAD L N + + +G +    +   I Q VE +   +    L  +L +
Sbjct  352  FSATFPREIQRLAADFLANYIFLAVGRVGS--STDLIVQRVEFVLDSDKRSHLMDLLHA  408


>gi|6735368|emb|CAB68189.1|  ATP-dependent RNA helicase-like protein [Arabidopsis thaliana]
Length=603

 Score =  114 bits (284),  Expect(2) = 4e-28
 Identities = 68/137 (49%), Positives = 93/137 (67%), Gaps = 4/137 (2%)
 Frame = -3

Query  456  TKKMCDQLARNLS-RQFGAAAIHGDKSQADRDYVLSQFRTGRSPVLVATDVAARGLDIKD  280
            TK+  D L   L   +F A +IHGD++Q +R+  L  F+TGR+P+LVATDVAARGLDI  
Sbjct  408  TKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARGLDIPH  467

Query  279  IRVVINYDFPTGVEDYVHRIgrtgragatGLAYTFFGDQDSKYASDLIKVLEGANQRVPA  100
            +  V+N+D P  ++DYVHRIGRTGRAG +G+A  FF + +++ A  L ++++ ANQ VP 
Sbjct  468  VAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIATAFFNENNAQLARSLAELMQEANQEVPE  527

Query  99   ELRDMASR---GGGMGR  58
             L   ASR   GGG  R
Sbjct  528  WLTRYASRASFGGGKKR  544


 Score = 31.2 bits (69),  Expect(2) = 4e-28
 Identities = 15/59 (25%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
 Frame = -2

Query  670  YPATWPREVRKIAADLLVNPVQVNIGNIDELVANKSITQYVEVLSPMENHRRLEQILRS  494
            + AT+P +++++AAD + N + + +G +    +   ITQ VE +   +    L  +L +
Sbjct  344  FSATFPSQIQRLAADFMSNYIFLAVGRVGS--STDLITQRVEFVQESDKRSHLMDLLHA  400


>gi|115486155|ref|NP_001068221.1| Gene info Os11g0599500 [Oryza sativa (japonica cultivar-group)]
 gi|77551918|gb|ABA94715.1| Gene info DEAD-box protein 3, X-chromosomal, putative, expressed [Oryza 
sativa (japonica cultivar-group)]
 gi|113645443|dbj|BAF28584.1| Gene info Os11g0599500 [Oryza sativa (japonica cultivar-group)]
Length=623

 Score =  123 bits (308),  Expect = 7e-28
 Identities = 72/145 (49%), Positives = 98/145 (67%), Gaps = 4/145 (2%)
 Frame = -3

Query  471  IIFCSTKKMCDQLARNLSRQ-FGAAAIHGDKSQADRDYVLSQFRTGRSPVLVATDVAARG  295
            ++F  TK+  D L   L    F A +IHGD++Q +R+Y L  F++G +P+LVATDVAARG
Sbjct  420  LVFVETKRGADSLEHWLCMNGFPATSIHGDRNQQEREYALRSFKSGHTPILVATDVAARG  479

Query  294  LDIKDIRVVINYDFPTGVEDYVHRIgrtgragatGLAYTFFGDQDSKYASDLIKVLEGAN  115
            LDI  +  V+N+D P  ++DYVHRIGRTGRAG +GLA  FF + +S  A  L ++++ +N
Sbjct  480  LDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNSSMARSLAELMQESN  539

Query  114  QRVPAELRDMASR---GGGMGRPRR  49
            Q VPA L   A+R   GGG GR RR
Sbjct  540  QEVPAWLSRYAARPSYGGGGGRNRR  564


>gi|115471073|ref|NP_001059135.1| Gene info Os07g0202100 [Oryza sativa (japonica cultivar-group)]
 gi|34393986|dbj|BAC83834.1| Gene info putative DEAD-box RNA helicase DEAD3 [Oryza sativa (japonica 
cultivar-group)]
 gi|113610671|dbj|BAF21049.1| Gene info Os07g0202100 [Oryza sativa (japonica cultivar-group)]
Length=638

 Score =  120 bits (301),  Expect = 5e-27
 Identities = 72/145 (49%), Positives = 98/145 (67%), Gaps = 4/145 (2%)
 Frame = -3

Query  471  IIFCSTKKMCDQLARNL-SRQFGAAAIHGDKSQADRDYVLSQFRTGRSPVLVATDVAARG  295
            ++F  TK+  D L   L +  F A +IHGD++Q +R+Y L  F++G +P+LVATDVAARG
Sbjct  432  LVFVETKRGADALENWLYNNGFPATSIHGDRTQQEREYALRSFKSGATPILVATDVAARG  491

Query  294  LDIKDIRVVINYDFPTGVEDYVHRIgrtgragatGLAYTFFGDQDSKYASDLIKVLEGAN  115
            LDI  +  VIN+D P  ++DYVHRIGRTGRAG +GLA  FF + ++  A  L ++++ AN
Sbjct  492  LDIPHVAHVINFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNESNTPLARPLSELMQEAN  551

Query  114  QRVPAELRDMASR---GGGMGRPRR  49
            Q VP  L   A+R   GGG GR RR
Sbjct  552  QEVPQWLERYAARSSFGGGGGRNRR  576


>gi|116059391|emb|CAL55098.1|  DEAD-box protein abstrakt (ISS) [Ostreococcus tauri]
Length=1025

 Score =  107 bits (267),  Expect(2) = 5e-27
 Identities = 65/128 (50%), Positives = 85/128 (66%), Gaps = 2/128 (1%)
 Frame = -3

Query  480  SKIIIFCSTKKMCDQLARNLSRQ-FGAAAIHGDKSQADRDYVLSQFRTGRSPVLVATDVA  304
            S+++IF +TK+  + LA+  S + FG  ++HGDKSQADR+  L +F   + P+++ATDVA
Sbjct  298  SRVVIFANTKRRVENLAKTFSAEGFGVVSVHGDKSQADREASLRKFIDNKCPLMMATDVA  357

Query  303  ARGLDIKDIRVVINYDFPTGVEDYVHRIgrtgragatGLAYTFFG-DQDSKYASDLIKVL  127
            ARGLDIK +  VINYD    VE YVHRIGRTGRAG  G A TF+  D D    + L K+ 
Sbjct  358  ARGLDIKGVTHVINYDMARDVESYVHRIGRTGRAGELGAAVTFWNCDYDKPCTAALCKIA  417

Query  126  EGANQRVP  103
              A Q VP
Sbjct  418  RDAGQVVP  425


 Score = 33.9 bits (76),  Expect(2) = 5e-27
 Identities = 22/46 (47%), Positives = 27/46 (58%), Gaps = 7/46 (15%)
 Frame = -2

Query  670  YPATWPREVRKIAADLL------VNPVQVNIGNID-ELVANKSITQ  554
            + ATWP+ VRK+AA  L      V  V +  G  D EL ANK+ITQ
Sbjct  228  FSATWPKSVRKLAACYLNQDKSRVREVFIGEGAQDGELAANKAITQ  273


>gi|3775999|emb|CAA09202.1| UniGene info RNA helicase [Arabidopsis thaliana]
Length=224

 Score =  119 bits (299),  Expect = 8e-27
 Identities = 71/149 (47%), Positives = 99/149 (66%), Gaps = 4/149 (2%)
 Frame = -3

Query  492  QEPGSKIIIFCSTKKMCDQLARNLS-RQFGAAAIHGDKSQADRDYVLSQFRTGRSPVLVA  316
            Q+  S  ++F  TK+  D L   L   +F A +IHGD++Q +R+  L  F+TGR+P+LVA
Sbjct  17   QDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTGRTPILVA  76

Query  315  TDVAARGLDIKDIRVVINYDFPTGVEDYVHRIgrtgragatGLAYTFFGDQDSKYASDLI  136
            TDVAARGLDI  +  V+N+D P  ++DYVHRIGRTGRAG +G+A  FF + +++ A  L 
Sbjct  77   TDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIATAFFNENNAQLARSLA  136

Query  135  KVLEGANQRVPAELRDMASR---GGGMGR  58
            ++++ ANQ VP  L   ASR   GGG  R
Sbjct  137  ELMQEANQEVPEWLTRYASRASFGGGKKR  165


>gi|115456051|ref|NP_001051626.1| Gene info Os03g0805200 [Oryza sativa (japonica cultivar-group)]
 gi|41469394|gb|AAS07217.1| Gene info putative helicase [Oryza sativa (japonica cultivar-group)]
 gi|108711635|gb|ABF99430.1| Gene info ATP-dependent RNA helicase An3, putative, expressed [Oryza sativa 
(japonica cultivar-group)]
 gi|113550097|dbj|BAF13540.1| Gene info Os03g0805200 [Oryza sativa (japonica cultivar-group)]
Length=637

 Score =  118 bits (295),  Expect = 2e-26
 Identities = 71/145 (48%), Positives = 97/145 (66%), Gaps = 4/145 (2%)
 Frame = -3

Query  471  IIFCSTKKMCDQLARNL-SRQFGAAAIHGDKSQADRDYVLSQFRTGRSPVLVATDVAARG  295
            ++F  TK+  D L   L +  F A +IHGD++Q +R+Y L  F++G +P+LVATDVAARG
Sbjct  437  LVFVETKRGADALENWLYTNGFPATSIHGDRTQQEREYALRSFKSGATPILVATDVAARG  496

Query  294  LDIKDIRVVINYDFPTGVEDYVHRIgrtgragatGLAYTFFGDQDSKYASDLIKVLEGAN  115
            LDI  +  VIN+D P  ++DYVHRIGRTGRAG +GLA  FF + +   A  L ++++ AN
Sbjct  497  LDIPHVAHVINFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNEGNLSLARPLCELMQEAN  556

Query  114  QRVPAELRDMASR---GGGMGRPRR  49
            Q VP  L   ++R   GGG GR RR
Sbjct  557  QEVPQWLERYSARSSFGGGGGRNRR  581


>gi|92888082|gb|ABE89166.1|  Helicase, C-terminal [Medicago truncatula]
Length=613

 Score =  115 bits (289),  Expect = 1e-25
 Identities = 70/142 (49%), Positives = 91/142 (64%), Gaps = 4/142 (2%)
 Frame = -3

Query  471  IIFCSTKKMCDQLARNLS-RQFGAAAIHGDKSQADRDYVLSQFRTGRSPVLVATDVAARG  295
            ++F  TKK  D L   L    F A  IHGD+SQ +R+  L  F++G +P+LVATDVAARG
Sbjct  408  LVFVETKKGADALEHWLCLNNFPATTIHGDRSQQEREAALRSFKSGNTPILVATDVAARG  467

Query  294  LDIKDIRVVINYDFPTGVEDYVHRIgrtgragatGLAYTFFGDQDSKYASDLIKVLEGAN  115
            LDI  +  V+N+D P  ++DYVHRIGRTGRAG  GLA  FF + ++  A  L  +++ AN
Sbjct  468  LDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKKGLATAFFNENNTSMARSLQDLMQEAN  527

Query  114  QRVPAELRDMASR---GGGMGR  58
            Q VPA L   A+R   GGG  R
Sbjct  528  QEVPAWLSRFAARSSFGGGKNR  549


>gi|116057517|emb|CAL51944.1|  DEAD-box protein abstrakt (ISS) [Ostreococcus tauri]
Length=492

 Score =  104 bits (260),  Expect(2) = 1e-25
 Identities = 65/143 (45%), Positives = 90/143 (62%), Gaps = 2/143 (1%)
 Frame = -3

Query  471  IIFCSTKKMCDQLARNL-SRQFGAAAIHGDKSQADRDYVLSQFRTGRSPVLVATDVAARG  295
            ++F  TK+  DQL   L +    A +IHGD++Q +R+  L  FR+G++P+LVATDVAARG
Sbjct  253  LVFVETKRGADQLEDFLFTNGKPATSIHGDRTQQEREAALKSFRSGKTPILVATDVAARG  312

Query  294  LDIKDIRVVINYDFPTGVEDYVHRIgrtgragatGLAYT-FFGDQDSKYASDLIKVLEGA  118
            LDI  +  VIN+D P+ ++DY HRIGRTGRAG  G A   F   +D + A  L+ ++  A
Sbjct  313  LDIPHVTHVINFDLPSDIDDYTHRIGRTGRAGKKGRATALFLESKDGQIARSLVDLMSEA  372

Query  117  NQRVPAELRDMASRGGGMGRPRR  49
            NQ VP  L  ++    G G  RR
Sbjct  373  NQEVPTWLTQVSGNSFGGGGRRR  395


 Score = 32.0 bits (71),  Expect(2) = 1e-25
 Identities = 18/57 (31%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
 Frame = -2

Query  670  YPATWPREVRKIAADLLVNPVQVNIGNIDELVANKSITQYVEVLSPMENHRRLEQIL  500
            + AT+PRE++++AAD L + + + +G +    ++  ITQ VE ++    H + E +L
Sbjct  190  FSATFPREIQRMAADFLDDYIFLTVGRVGS--SHALITQSVERVN--SYHEKSEMLL  242


>gi|15218071|ref|NP_173516.1| UniGene infoGene info ATP binding / ATP-dependent helicase/ helicase/ nucleic acid 
binding [Arabidopsis thaliana]
 gi|108861895|sp|Q8H0U8|RH42_ARATH Gene info DEAD-box ATP-dependent RNA helicase 42
 gi|4836896|gb|AAD30599.1|AC007369_9 Gene info Similar to RNA helicases [Arabidopsis thaliana]
Length=1166

 Score =  114 bits (284),  Expect = 4e-25
 Identities = 61/133 (45%), Positives = 91/133 (68%), Gaps = 1/133 (0%)
 Frame = -3

Query  477  KIIIFCSTKKMCDQLARNLSRQ-FGAAAIHGDKSQADRDYVLSQFRTGRSPVLVATDVAA  301
            KI++F  +++ CD L R++ +  +   ++HG K Q DR+  +S F+     +L+AT VAA
Sbjct  778  KILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVCNLLIATSVAA  837

Query  300  RGLDIKDIRVVINYDFPTGVEDYVHRIgrtgragatGLAYTFFGDQDSKYASDLIKVLEG  121
            RGLD+K++ +V+N+D P   EDYVHR+GRTGRAG  G A TF  + D+KYA DL+K LE 
Sbjct  838  RGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDDAKYAPDLVKALEL  897

Query  120  ANQRVPAELRDMA  82
            + Q VP +L+ +A
Sbjct  898  SEQPVPDDLKALA  910


 Score = 41.6 bits (96),  Expect = 0.003
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
 Frame = -2

Query  670  YPATWPREVRKIAADLLVNPVQVNIGNIDELVANKSITQYVEVLSPMENHRRLEQILRSP  491
            + AT+PR+V  +A  +L  PV++ +G     V NK ITQ VEV    +   RL ++L   
Sbjct  716  FSATFPRQVETLARKVLNKPVEIQVGG--RSVVNKDITQLVEVRPESDRFLRLLELLGEW  773

Query  490  GARIQDYYFLFNQE  449
              + +   F+ +QE
Sbjct  774  SEKGKILVFVQSQE  787


>gi|25083096|gb|AAN72041.1| UniGene info putative RNA helicase [Arabidopsis thaliana]
Length=559

 Score =  112 bits (281),  Expect = 1e-24
 Identities = 61/133 (45%), Positives = 91/133 (68%), Gaps = 1/133 (0%)
 Frame = -3

Query  477  KIIIFCSTKKMCDQLARNLSRQ-FGAAAIHGDKSQADRDYVLSQFRTGRSPVLVATDVAA  301
            KI++F  +++ CD L R++ +  +   ++HG K Q DR+  +S F+     +L+AT VAA
Sbjct  171  KILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVCNLLIATSVAA  230

Query  300  RGLDIKDIRVVINYDFPTGVEDYVHRIgrtgragatGLAYTFFGDQDSKYASDLIKVLEG  121
            RGLD+K++ +V+N+D P   EDYVHR+GRTGRAG  G A TF  + D+KYA DL+K LE 
Sbjct  231  RGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDDAKYAPDLVKDLEL  290

Query  120  ANQRVPAELRDMA  82
            + Q VP +L+ +A
Sbjct  291  SEQPVPDDLKALA  303


 Score = 41.6 bits (96),  Expect = 0.003
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
 Frame = -2

Query  670  YPATWPREVRKIAADLLVNPVQVNIGNIDELVANKSITQYVEVLSPMENHRRLEQILRSP  491
            + AT+PR+V  +A  +L  PV++ +G     V NK ITQ VEV    +   RL ++L   
Sbjct  109  FSATFPRQVETLARKVLNKPVEIQVGG--RSVVNKDITQLVEVRPESDRFLRLLELLGEW  166

Query  490  GARIQDYYFLFNQE  449
              + +   F+ +QE
Sbjct  167  SEKGKILVFVQSQE  180


>gi|3775989|emb|CAA09197.1| UniGene info RNA helicase [Arabidopsis thaliana]
Length=411

 Score =  112 bits (280),  Expect = 1e-24
 Identities = 68/130 (52%), Positives = 90/130 (69%), Gaps = 1/130 (0%)
 Frame = -3

Query  480  SKIIIFCSTKKMCDQLARNLS-RQFGAAAIHGDKSQADRDYVLSQFRTGRSPVLVATDVA  304
            +++++F   K   ++L R L  R + A +IHG+K+Q++R   LS F+ G  P+LVATDVA
Sbjct  241  NRVLVFALYKVEAERLERFLQQRGWKAVSIHGNKAQSERTRSLSLFKEGSCPLLVATDVA  300

Query  303  ARGLDIKDIRVVINYDFPTGVEDYVHRIgrtgragatGLAYTFFGDQDSKYASDLIKVLE  124
            ARGLDI D+ VVINY FP   EDYVHRIGRTGRAG  G+A+TFF   +   A +L+ VL 
Sbjct  301  ARGLDIPDVEVVINYTFPLTTEDYVHRIGRTGRAGKKGVAHTFFTPLNKGLAGELVNVLR  360

Query  123  GANQRVPAEL  94
             A Q VPA+L
Sbjct  361  EAGQVVPADL  370


>gi|15222526|ref|NP_174479.1| UniGene infoGene info ATP binding / ATP-dependent helicase/ helicase/ nucleic acid 
binding [Arabidopsis thaliana]
 gi|75333350|sp|Q9C551|RH5_ARATH Gene info DEAD-box ATP-dependent RNA helicase 5
 gi|12321302|gb|AAG50723.1|AC079041_16 Gene info p68 RNA helicase, putative [Arabidopsis thaliana]
 gi|12321459|gb|AAG50784.1|AC074309_1 Gene info RNA helicase, putative [Arabidopsis thaliana]
 gi|19347812|gb|AAL86356.1| UniGene infoGene info putative p68 RNA helicase [Arabidopsis thaliana]
 gi|21436171|gb|AAM51373.1| UniGene infoGene info putative p68 RNA helicase [Arabidopsis thaliana]
Length=537

 Score =  112 bits (280),  Expect = 1e-24
 Identities = 68/130 (52%), Positives = 90/130 (69%), Gaps = 1/130 (0%)
 Frame = -3

Query  480  SKIIIFCSTKKMCDQLARNLS-RQFGAAAIHGDKSQADRDYVLSQFRTGRSPVLVATDVA  304
            +++++F   K   ++L R L  R + A +IHG+K+Q++R   LS F+ G  P+LVATDVA
Sbjct  367  NRVLVFALYKVEAERLERFLQQRGWKAVSIHGNKAQSERTRSLSLFKEGSCPLLVATDVA  426

Query  303  ARGLDIKDIRVVINYDFPTGVEDYVHRIgrtgragatGLAYTFFGDQDSKYASDLIKVLE  124
            ARGLDI D+ VVINY FP   EDYVHRIGRTGRAG  G+A+TFF   +   A +L+ VL 
Sbjct  427  ARGLDIPDVEVVINYTFPLTTEDYVHRIGRTGRAGKKGVAHTFFTPLNKGLAGELVNVLR  486

Query  123  GANQRVPAEL  94
             A Q VPA+L
Sbjct  487  EAGQVVPADL  496







  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 15, 2007  4:53 AM
  Number of letters in database: 101,054,579
  Number of sequences in database:  283,349
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283349
Number of Hits to DB: 482
Number of extensions: 2
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 671
Length of database: 101054579
Length adjustment: 109
Effective length of query: 562
Effective length of database: 70169538
Effective search space: 7999327332
Effective search space used: 7999327332
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 65 (29.6 bits)