Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168931153-27704-133947210134.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig154 Length=361
Score E Sequences producing significant alignments: (Bits) Value gi|15222811|ref|NP_175397.1| unknown protein [Arabidopsis tha... 65.5 5e-11 gi|15230349|ref|NP_188563.1| protein binding [Arabidopsis tha... 55.5 6e-08 gi|32488241|emb|CAE02949.1| OSJNBa0014K14.21 [Oryza sativa (j... 44.3 1e-04 gi|87240777|gb|ABD32635.1| Leucine-rich repeat, plant specific [ 42.7 4e-04 gi|115461220|ref|NP_001054210.1| Os04g0670100 [Oryza sativa (... 42.0 6e-04 gi|90399162|emb|CAJ86091.1| H0818H01.13 [Oryza sativa (indica cu 42.0 6e-04 gi|32488397|emb|CAE02822.1| OSJNBa0043A12.27 [Oryza sativa (japo 42.0 6e-04 gi|30680322|ref|NP_849339.1| protein binding [Arabidopsis tha... 40.4 0.002 gi|115470843|ref|NP_001059020.1| Os07g0176500 [Oryza sativa (... 39.7 0.003 gi|115455893|ref|NP_001051547.1| Os03g0795300 [Oryza sativa (... 38.9 0.005 gi|115434892|ref|NP_001042204.1| Os01g0180000 [Oryza sativa (... 38.9 0.005 gi|115454249|ref|NP_001050725.1| Os03g0637600 [Oryza sativa (... 37.0 0.021 gi|15235668|ref|NP_193070.1| unknown protein [Arabidopsis tha... 36.2 0.036 gi|20259488|gb|AAM13864.1| unknown protein [Arabidopsis thaliana 36.2 0.036 gi|30685162|ref|NP_188532.2| protein binding / structural con... 36.2 0.036 gi|115462415|ref|NP_001054807.1| Os05g0180300 [Oryza sativa (... 34.7 0.10 gi|47847842|dbj|BAD21636.1| leucine-rich repeat-like protein ... 34.7 0.10 gi|15233976|ref|NP_193602.1| protein binding [Arabidopsis tha... 33.5 0.23 gi|15230120|ref|NP_189091.1| protein binding [Arabidopsis tha... 33.5 0.23 gi|15226640|ref|NP_179188.1| structural constituent of cell w... 32.0 0.67 gi|15222149|ref|NP_175372.1| structural constituent of cell w... 30.0 2.6 gi|15235186|ref|NP_195123.1| protein binding [Arabidopsis tha... 29.6 3.3 gi|15239465|ref|NP_197937.1| protein binding [Arabidopsis tha... 29.3 4.4 gi|115470489|ref|NP_001058843.1| Os07g0134600 [Oryza sativa (... 28.9 5.7 gi|927577|gb|AAA73964.1| alpha-galactosidase 28.5 7.4 gi|15228861|ref|NP_188919.1| protein binding / structural con... 28.5 7.4 gi|115464963|ref|NP_001056081.1| Os05g0522400 [Oryza sativa (... 28.1 9.7
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 314 Number of extensions: 3 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 361 Length of database: 101054579 Length adjustment: 87 Effective length of query: 274 Effective length of database: 76403216 Effective search space: 2521306128 Effective search space used: 2521306128 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 61 (28.1 bits)