Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168926694-6760-132862813390.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig16 Length=607
Score E Sequences producing significant alignments: (Bits) Value gi|110740216|dbj|BAF02006.1| hypothetical protein [Arabidopsis t 222 9e-58 gi|42566980|ref|NP_193746.3| unknown protein [Arabidopsis tha... 222 9e-58 gi|62320136|dbj|BAD94330.1| hypothetical protein [Arabidopsis th 221 1e-57 gi|2827666|emb|CAA16620.1| hypothetical protein [Arabidopsis ... 213 6e-55 gi|115465737|ref|NP_001056468.1| Os05g0587200 [Oryza sativa (... 159 7e-39 gi|15226909|ref|NP_181059.1| unknown protein [Arabidopsis tha... 32.3 1.4 gi|38347561|emb|CAE04994.2| OSJNBb0093G06.2 [Oryza sativa (japon 31.2 3.0
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 397 Number of extensions: 2 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 607 Length of database: 101054579 Length adjustment: 108 Effective length of query: 499 Effective length of database: 70452887 Effective search space: 6622571378 Effective search space used: 6622571378 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 65 (29.6 bits)